RNA–Protein interactions for RNA: ENST00000389301.7

FANCA-202, Transcript of FA complementation group A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FANCA, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-202ENST00000389301 DMDP11532 3685 aa6.8□□□□□ -1.32
FANCA-202ENST00000389301 TNP1P09430 55 aa6.8□□□□□ -1.32
FANCA-202ENST00000389301 KALRNO60229 2985 aa6.77□□□□□ -1.33
FANCA-202ENST00000389301 H0YAA0 97 aa6.77□□□□□ -1.33
FANCA-202ENST00000389301 UBR5O95071 2799 aaPredicted RBP6.76□□□□□ -1.33
FANCA-202ENST00000389301 CELSR3Q9NYQ7 3312 aa6.75□□□□□ -1.33
FANCA-202ENST00000389301 FRYLO94915 3013 aa6.73□□□□□ -1.33
FANCA-202ENST00000389301 DMXL2Q8TDJ6 3036 aa6.72□□□□□ -1.33
FANCA-202ENST00000389301 DMXL1Q9Y485 3027 aa6.71□□□□□ -1.34
FANCA-202ENST00000389301 ITPR1Q14643 2758 aa6.7□□□□□ -1.34
FANCA-202ENST00000389301 NSD1Q96L73 2696 aaPredicted RBP6.69□□□□□ -1.34
FANCA-202ENST00000389301 SPENQ96T58 3664 aaKnown RBP6.68□□□□□ -1.34
FANCA-202ENST00000389301 BOD1L1Q8NFC6 3051 aa6.68□□□□□ -1.34
FANCA-202ENST00000389301 PP632Q6XCG6 107 aa6.67□□□□□ -1.34
FANCA-202ENST00000389301 APCP25054 2843 aa6.66□□□□□ -1.34
FANCA-202ENST00000389301 P0C880 135 aa6.66□□□□□ -1.34
FANCA-202ENST00000389301 NBEAQ8NFP9 2946 aa6.64□□□□□ -1.35
FANCA-202ENST00000389301 FLNCQ14315 2725 aa6.63□□□□□ -1.35
FANCA-202ENST00000389301 ATMQ13315 3056 aa6.62□□□□□ -1.35
FANCA-202ENST00000389301 ZFHX4Q86UP3 3567 aa6.62□□□□□ -1.35
FANCA-202ENST00000389301 ASH1LQ9NR48 2969 aaKnown RBP6.62□□□□□ -1.35
FANCA-202ENST00000389301 KRTAP1-4P0C5Y4 121 aa6.6□□□□□ -1.35
FANCA-202ENST00000389301 ITPR2Q14571 2701 aa6.6□□□□□ -1.35
FANCA-202ENST00000389301 ASPMQ8IZT6 3477 aa6.6□□□□□ -1.35
FANCA-202ENST00000389301 KRTAP10-8P60410 259 aa6.58□□□□□ -1.36
FANCA-202ENST00000389301 UTP20O75691 2785 aaKnown RBP6.56□□□□□ -1.36
FANCA-202ENST00000389301 ADGRG4Q8IZF6 3080 aa6.56□□□□□ -1.36
FANCA-202ENST00000389301 XP32Q5T750 250 aa6.56□□□□□ -1.36
FANCA-202ENST00000389301 HIVEP1P15822 2718 aa6.55□□□□□ -1.36
FANCA-202ENST00000389301 LRBAP50851 2863 aa6.55□□□□□ -1.36
FANCA-202ENST00000389301 COL12A1Q99715 3063 aa6.55□□□□□ -1.36
FANCA-202ENST00000389301 TACC2O95359 2948 aa6.54□□□□□ -1.36
FANCA-202ENST00000389301 MUC3AQ02505 3323 aa6.54□□□□□ -1.36
FANCA-202ENST00000389301 SMG1Q96Q15 3661 aaKnown RBP6.52□□□□□ -1.37
FANCA-202ENST00000389301 LOC400499M0QZD8 3231 aa6.5□□□□□ -1.37
FANCA-202ENST00000389301 DCHS1Q96JQ0 3298 aa6.5□□□□□ -1.37
FANCA-202ENST00000389301 A0A1B0GVY2 172 aa6.47□□□□□ -1.37
FANCA-202ENST00000389301 CFAP47Q6ZTR5 3102 aa6.45□□□□□ -1.38
FANCA-202ENST00000389301 KRTAP21-3Q3LHN1 58 aa6.44□□□□□ -1.38
FANCA-202ENST00000389301 KMT2BQ9UMN6 2715 aaPredicted RBP6.43□□□□□ -1.38
FANCA-202ENST00000389301 ZZEF1O43149 2961 aa6.42□□□□□ -1.38
FANCA-202ENST00000389301 KRTAP13-3Q3SY46 172 aa6.41□□□□□ -1.38
FANCA-202ENST00000389301 HRNRQ86YZ3 2850 aaPredicted RBP6.39□□□□□ -1.39
FANCA-202ENST00000389301 CELSR2Q9HCU4 2923 aa6.37□□□□□ -1.39
FANCA-202ENST00000389301 NIPBLQ6KC79 2804 aaeCLIP6.36□□□□□ -1.39
FANCA-202ENST00000389301 CSMD1Q96PZ7 3565 aa6.35□□□□□ -1.39
FANCA-202ENST00000389301 LAMA5O15230 3695 aa6.33□□□□□ -1.4
FANCA-202ENST00000389301 KRTAP12-2P59991 146 aa6.32□□□□□ -1.4
FANCA-202ENST00000389301 TPRXLQ17RH7 258 aa6.32□□□□□ -1.4
FANCA-202ENST00000389301 RELNP78509 3460 aa6.29□□□□□ -1.4
FANCA-202ENST00000389301 CRYBG3Q68DQ2 2970 aa6.28□□□□□ -1.4
FANCA-202ENST00000389301 DCHS2Q6V1P9 2916 aa6.27□□□□□ -1.41
FANCA-202ENST00000389301 ZFHX3Q15911 3703 aa6.27□□□□□ -1.41
FANCA-202ENST00000389301 SVEP1Q4LDE5 3571 aa6.27□□□□□ -1.41
FANCA-202ENST00000389301 ZANQ9Y493 2812 aa6.27□□□□□ -1.41
FANCA-202ENST00000389301 KRTAP10-10P60014 251 aa6.25□□□□□ -1.41
FANCA-202ENST00000389301 TGP01266 2768 aa6.22□□□□□ -1.41
FANCA-202ENST00000389301 TENM4Q6N022 2769 aa6.21□□□□□ -1.42
FANCA-202ENST00000389301 KRTAP12-1P59990 96 aa6.18□□□□□ -1.42
FANCA-202ENST00000389301 FBN2P35556 2912 aa6.17□□□□□ -1.42
FANCA-202ENST00000389301 PRO2289Q9P1D8 64 aa6.17□□□□□ -1.42
FANCA-202ENST00000389301 KRTAP13-4Q3LI77 160 aa6.16□□□□□ -1.42
FANCA-202ENST00000389301 BSNQ9UPA5 3926 aa6.15□□□□□ -1.42
FANCA-202ENST00000389301 KRTAP3-1Q9BYR8 98 aa6.11□□□□□ -1.43
FANCA-202ENST00000389301 NF1P21359 2839 aa6.1□□□□□ -1.43
FANCA-202ENST00000389301 PDZD2O15018 2839 aa6.07□□□□□ -1.44
FANCA-202ENST00000389301 VPS13CQ709C8 3753 aa6.05□□□□□ -1.44
FANCA-202ENST00000389301 MXRA5Q9NR99 2828 aa6.04□□□□□ -1.44
FANCA-202ENST00000389301 TENM3Q9P273 2699 aa6.03□□□□□ -1.44
FANCA-202ENST00000389301 TENM1Q9UKZ4 2725 aa6.02□□□□□ -1.45
FANCA-202ENST00000389301 CELSR1Q9NYQ6 3014 aa5.99□□□□□ -1.45
FANCA-202ENST00000389301 KRTAP10-6P60371 365 aaPredicted RBP5.97□□□□□ -1.45
FANCA-202ENST00000389301 TENM2Q9NT68 2774 aa5.96□□□□□ -1.46
FANCA-202ENST00000389301 OTOGQ6ZRI0 2925 aa5.93□□□□□ -1.46
FANCA-202ENST00000389301 NBPF19A0A087WUL8 3843 aa5.92□□□□□ -1.46
FANCA-202ENST00000389301 CSMD2Q7Z408 3487 aa5.9□□□□□ -1.46
FANCA-202ENST00000389301 KRTAP15-1Q3LI76 137 aa5.9□□□□□ -1.46
FANCA-202ENST00000389301 AKAP9Q99996 3911 aa5.86□□□□□ -1.47
FANCA-202ENST00000389301 CUBNO60494 3623 aa5.86□□□□□ -1.47
FANCA-202ENST00000389301 ANK3Q12955 4377 aaKnown RBP5.85□□□□□ -1.47
FANCA-202ENST00000389301 INE1O15225 51 aa5.75□□□□□ -1.49
FANCA-202ENST00000389301 PKD1L1Q8TDX9 2849 aa5.74□□□□□ -1.49
FANCA-202ENST00000389301 KRTAP3-2Q9BYR7 98 aa5.74□□□□□ -1.49
FANCA-202ENST00000389301 VWFP04275 2813 aa5.73□□□□□ -1.49
FANCA-202ENST00000389301 KRTAP3-3Q9BYR6 98 aa5.69□□□□□ -1.5
FANCA-202ENST00000389301 FBN1P35555 2871 aaKnown RBP5.69□□□□□ -1.5
FANCA-202ENST00000389301 FBN3Q75N90 2809 aa5.56□□□□□ -1.52
FANCA-202ENST00000389301 MEGF8Q7Z7M0 2845 aa5.54□□□□□ -1.52
FANCA-202ENST00000389301 KRTAP10-12P60413 245 aa5.54□□□□□ -1.52
FANCA-202ENST00000389301 TRRAPQ9Y4A5 3859 aa5.54□□□□□ -1.52
FANCA-202ENST00000389301 MT1HL1P0DM35 61 aa5.49□□□□□ -1.53
FANCA-202ENST00000389301 ZNF469Q96JG9 3925 aaPredicted RBP5.48□□□□□ -1.53
FANCA-202ENST00000389301 CRCT1Q9UGL9 99 aa5.47□□□□□ -1.53
FANCA-202ENST00000389301 SRRM2Q9UQ35 2752 aaKnown RBP5.45□□□□□ -1.54
FANCA-202ENST00000389301 KRTAP12-3P60328 96 aa5.44□□□□□ -1.54
FANCA-202ENST00000389301 LCE3AQ5TA76 89 aa5.41□□□□□ -1.54
FANCA-202ENST00000389301 KRTAP23-1A1A580 65 aa5.41□□□□□ -1.54
FANCA-202ENST00000389301 HUWE1Q7Z6Z7 4374 aaKnown RBP5.37□□□□□ -1.55
FANCA-202ENST00000389301 LORP23490 312 aaPredicted RBP5.36□□□□□ -1.55
FANCA-202ENST00000389301 KRTAP10-4P60372 401 aaPredicted RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms