RNA–Protein interactions for RNA: ENST00000383861.1

RNU1-28P-201, Transcript of RNA, U1 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU1-28P, Length 164 nt, Biotype snRNA, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-28P-201ENST00000383861 C8orf17Q9NRJ1 99 aa4.98□□□□□ -1.61
RNU1-28P-201ENST00000383861 LINC00313P59037 77 aa4.97□□□□□ -1.61
RNU1-28P-201ENST00000383861 CASC2Q6XLA1 102 aa4.97□□□□□ -1.61
RNU1-28P-201ENST00000383861 FAM236AA0A1B0GUQ0 79 aa4.96□□□□□ -1.62
RNU1-28P-201ENST00000383861 FAM236BA0A1B0GV22 79 aa4.96□□□□□ -1.62
RNU1-28P-201ENST00000383861 hDV103S1A0JD37 113 aa4.96□□□□□ -1.62
RNU1-28P-201ENST00000383861 SMIM20Q8N5G0 67 aa4.96□□□□□ -1.62
RNU1-28P-201ENST00000383861 MMP24-AS1A0A0U1RRL7 71 aa4.95□□□□□ -1.62
RNU1-28P-201ENST00000383861 ATOX1O00244 68 aa4.95□□□□□ -1.62
RNU1-28P-201ENST00000383861 TMEM254Q8TBM7 123 aa4.95□□□□□ -1.62
RNU1-28P-201ENST00000383861 RETNLBQ9BQ08 111 aa4.94□□□□□ -1.62
RNU1-28P-201ENST00000383861 IGLV7-46A0A075B6I9 117 aa4.93□□□□□ -1.62
RNU1-28P-201ENST00000383861 WFDC13Q8IUB5 93 aa4.93□□□□□ -1.62
RNU1-28P-201ENST00000383861 MRPL34Q9BQ48 92 aaKnown RBP4.93□□□□□ -1.62
RNU1-28P-201ENST00000383861 PRR4Q16378 134 aa4.91□□□□□ -1.62
RNU1-28P-201ENST00000383861 TP53AIP1Q9HCN2 124 aa4.91□□□□□ -1.62
RNU1-28P-201ENST00000383861 FLG2Q5D862 2391 aaPredicted RBP4.91□□□□□ -1.62
RNU1-28P-201ENST00000383861 NOTCH2NLQ7Z3S9 236 aa4.9□□□□□ -1.63
RNU1-28P-201ENST00000383861 HERC2O95714 4834 aa4.9□□□□□ -1.63
RNU1-28P-201ENST00000383861 Q8N9P0 234 aaPredicted RBP4.89□□□□□ -1.63
RNU1-28P-201ENST00000383861 TRAV7A0A075B6U4 112 aa4.88□□□□□ -1.63
RNU1-28P-201ENST00000383861 KRTAP16-1A8MUX0 517 aa4.88□□□□□ -1.63
RNU1-28P-201ENST00000383861 UQCRQO14949 82 aa4.88□□□□□ -1.63
RNU1-28P-201ENST00000383861 NDUFS5O43920 106 aa4.88□□□□□ -1.63
RNU1-28P-201ENST00000383861 ANAPC13Q9BS18 74 aa4.88□□□□□ -1.63
RNU1-28P-201ENST00000383861 TPRXLQ17RH7 258 aa4.87□□□□□ -1.63
RNU1-28P-201ENST00000383861 SERP2Q8N6R1 65 aa4.87□□□□□ -1.63
RNU1-28P-201ENST00000383861 OCR1Q9BZK8 76 aa4.87□□□□□ -1.63
RNU1-28P-201ENST00000383861 C9orf92A6NGG3 77 aa4.86□□□□□ -1.63
RNU1-28P-201ENST00000383861 KRTAP13-3Q3SY46 172 aa4.86□□□□□ -1.63
RNU1-28P-201ENST00000383861 FAT3Q8TDW7 4589 aa4.86□□□□□ -1.63
RNU1-28P-201ENST00000383861 LRP1Q07954 4544 aaKnown RBP4.85□□□□□ -1.63
RNU1-28P-201ENST00000383861 C5orf47Q569G3 176 aa4.85□□□□□ -1.63
RNU1-28P-201ENST00000383861 C20orf166-AS1Q96NR2 134 aa4.85□□□□□ -1.63
RNU1-28P-201ENST00000383861 A8MUU9 505 aa4.84□□□□□ -1.63
RNU1-28P-201ENST00000383861 Q75L30 129 aa4.84□□□□□ -1.63
RNU1-28P-201ENST00000383861 DMBT1Q9UGM3 2413 aaPredicted RBP4.84□□□□□ -1.64
RNU1-28P-201ENST00000383861 TNXBP22105 4242 aa4.83□□□□□ -1.64
RNU1-28P-201ENST00000383861 COX7CP15954 63 aa4.83□□□□□ -1.64
RNU1-28P-201ENST00000383861 TRAV22A0A0B4J277 110 aa4.82□□□□□ -1.64
RNU1-28P-201ENST00000383861 H3BPC8 53 aa4.82□□□□□ -1.64
RNU1-28P-201ENST00000383861 MP68P56378 58 aa4.82□□□□□ -1.64
RNU1-28P-201ENST00000383861 XP32Q5T750 250 aa4.8□□□□□ -1.64
RNU1-28P-201ENST00000383861 H0Y9P7 68 aa4.79□□□□□ -1.64
RNU1-28P-201ENST00000383861 RPL37P61927 97 aaKnown RBP4.79□□□□□ -1.64
RNU1-28P-201ENST00000383861 ATP11AUNQ6ZP68 121 aa4.79□□□□□ -1.64
RNU1-28P-201ENST00000383861 ZCCHC13Q8WW36 166 aaKnown RBP4.79□□□□□ -1.64
RNU1-28P-201ENST00000383861 MYCBP2O75592 4640 aa4.79□□□□□ -1.64
RNU1-28P-201ENST00000383861 PCP4P48539 62 aa4.78□□□□□ -1.64
RNU1-28P-201ENST00000383861 ABCA13Q86UQ4 5058 aa4.78□□□□□ -1.64
RNU1-28P-201ENST00000383861 LOC101927531A0A1B0GV80 90 aa4.76□□□□□ -1.65
RNU1-28P-201ENST00000383861 Q5W150 140 aa4.75□□□□□ -1.65
RNU1-28P-201ENST00000383861 C20orf197Q8N268 126 aa4.75□□□□□ -1.65
RNU1-28P-201ENST00000383861 C1orf64Q8NEQ6 169 aa4.75□□□□□ -1.65
RNU1-28P-201ENST00000383861 LINC00208Q96KT6 92 aa4.75□□□□□ -1.65
RNU1-28P-201ENST00000383861 A0A0U1RQV1 116 aa4.74□□□□□ -1.65
RNU1-28P-201ENST00000383861 NDUFC1O43677 76 aa4.74□□□□□ -1.65
RNU1-28P-201ENST00000383861 KLKP1Q107X0 134 aa4.74□□□□□ -1.65
RNU1-28P-201ENST00000383861 SEC61BP60468 96 aaKnown RBP4.73□□□□□ -1.65
RNU1-28P-201ENST00000383861 CCDC179H3BU77 68 aa4.72□□□□□ -1.65
RNU1-28P-201ENST00000383861 IGKV2-30P06310 120 aa4.71□□□□□ -1.66
RNU1-28P-201ENST00000383861 C7orf65Q6ZTY9 151 aa4.71□□□□□ -1.66
RNU1-28P-201ENST00000383861 CYP4F30PQ9H0H9 118 aa4.7□□□□□ -1.66
RNU1-28P-201ENST00000383861 SNURFQ9Y675 71 aa4.7□□□□□ -1.66
RNU1-28P-201ENST00000383861 IGKV2D-30A0A075B6S6 120 aa4.69□□□□□ -1.66
RNU1-28P-201ENST00000383861 PCOTHQ58A44 107 aa4.68□□□□□ -1.66
RNU1-28P-201ENST00000383861 SPINK7P58062 85 aa4.67□□□□□ -1.66
RNU1-28P-201ENST00000383861 PCLOQ9Y6V0 5065 aa4.66□□□□□ -1.66
RNU1-28P-201ENST00000383861 H7BZZ5 65 aa4.65□□□□□ -1.67
RNU1-28P-201ENST00000383861 SPANXA2-OT1Q8N9U9 137 aa4.64□□□□□ -1.67
RNU1-28P-201ENST00000383861 ATP5EP56381 51 aaPredicted RBP4.62□□□□□ -1.67
RNU1-28P-201ENST00000383861 TMEM258P61165 79 aa4.62□□□□□ -1.67
RNU1-28P-201ENST00000383861 HRES1P13985 223 aa4.61□□□□□ -1.67
RNU1-28P-201ENST00000383861 CYSTM1Q9H1C7 97 aa4.61□□□□□ -1.67
RNU1-28P-201ENST00000383861 A8MUN3 132 aa4.58□□□□□ -1.68
RNU1-28P-201ENST00000383861 FAM236DA0A1B0GTK5 79 aa4.57□□□□□ -1.68
RNU1-28P-201ENST00000383861 FAM236CP0DP71 79 aa4.57□□□□□ -1.68
RNU1-28P-201ENST00000383861 RBM12B-AS1Q9P1G2 102 aa4.57□□□□□ -1.68
RNU1-28P-201ENST00000383861 ACYP2P14621 99 aa4.55□□□□□ -1.68
RNU1-28P-201ENST00000383861 C4orf26Q17RF5 130 aa4.55□□□□□ -1.68
RNU1-28P-201ENST00000383861 COX6B2Q6YFQ2 88 aa4.55□□□□□ -1.68
RNU1-28P-201ENST00000383861 DMAC1Q96GE9 116 aa4.54□□□□□ -1.68
RNU1-28P-201ENST00000383861 MPLKIPQ8TAP9 179 aa4.52□□□□□ -1.69
RNU1-28P-201ENST00000383861 LPAP08519 4548 aa4.51□□□□□ -1.69
RNU1-28P-201ENST00000383861 KRTAP4-1Q9BYQ7 146 aa4.49□□□□□ -1.69
RNU1-28P-201ENST00000383861 H1FX-AS1Q4G0G2 97 aa4.48□□□□□ -1.69
RNU1-28P-201ENST00000383861 SERP1Q9Y6X1 66 aa4.48□□□□□ -1.69
RNU1-28P-201ENST00000383861 HMCN2Q8NDA2 5059 aa4.47□□□□□ -1.69
RNU1-28P-201ENST00000383861 LRP2P98164 4655 aa4.47□□□□□ -1.69
RNU1-28P-201ENST00000383861 HERC1Q15751 4861 aa4.47□□□□□ -1.69
RNU1-28P-201ENST00000383861 CHKB-CPT1BH3BT56 60 aa4.46□□□□□ -1.7
RNU1-28P-201ENST00000383861 KRTAP3-1Q9BYR8 98 aa4.46□□□□□ -1.7
RNU1-28P-201ENST00000383861 RPS28P62857 69 aaKnown RBP4.45□□□□□ -1.7
RNU1-28P-201ENST00000383861 COA5Q86WW8 74 aa4.45□□□□□ -1.7
RNU1-28P-201ENST00000383861 SPTSSBQ8NFR3 76 aa4.45□□□□□ -1.7
RNU1-28P-201ENST00000383861 MUC17Q685J3 4493 aa4.44□□□□□ -1.7
RNU1-28P-201ENST00000383861 S4R3F8 94 aa4.41□□□□□ -1.7
RNU1-28P-201ENST00000383861 KRTAP19-2Q3LHN2 52 aa4.38□□□□□ -1.71
RNU1-28P-201ENST00000383861 SMIM26A0A096LP01 95 aa4.36□□□□□ -1.71
RNU1-28P-201ENST00000383861 LCA10Q71F78 164 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms