RNA–Protein interactions for RNA: ENST00000382100.7

VLDLR-203, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VLDLR, Length 9,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-203ENST00000382100 KRTAP1-1Q07627 177 aa5.59□□□□□ -1.51
VLDLR-203ENST00000382100 DMXL1Q9Y485 3027 aa5.57□□□□□ -1.52
VLDLR-203ENST00000382100 GOLGB1Q14789 3259 aaKnown RBP5.55□□□□□ -1.52
VLDLR-203ENST00000382100 KRTAP1-3Q8IUG1 177 aa5.55□□□□□ -1.52
VLDLR-203ENST00000382100 KRTAP13-1Q8IUC0 172 aa5.53□□□□□ -1.52
VLDLR-203ENST00000382100 DMXL2Q8TDJ6 3036 aa5.53□□□□□ -1.52
VLDLR-203ENST00000382100 COL12A1Q99715 3063 aa5.52□□□□□ -1.53
VLDLR-203ENST00000382100 C10orf95Q9H7T3 257 aa5.52□□□□□ -1.53
VLDLR-203ENST00000382100 KRTAP10-3P60369 221 aa5.5□□□□□ -1.53
VLDLR-203ENST00000382100 FBN2P35556 2912 aa5.48□□□□□ -1.53
VLDLR-203ENST00000382100 UTRNP46939 3433 aa5.47□□□□□ -1.53
VLDLR-203ENST00000382100 PRUNE2Q8WUY3 3088 aa5.46□□□□□ -1.54
VLDLR-203ENST00000382100 KRTAP1-5Q9BYS1 174 aa5.44□□□□□ -1.54
VLDLR-203ENST00000382100 INE1O15225 51 aa5.44□□□□□ -1.54
VLDLR-203ENST00000382100 FBN3Q75N90 2809 aa5.43□□□□□ -1.54
VLDLR-203ENST00000382100 KRTAP21-3Q3LHN1 58 aa5.42□□□□□ -1.54
VLDLR-203ENST00000382100 H0YAA0 97 aa5.4□□□□□ -1.54
VLDLR-203ENST00000382100 C5orf42Q9H799 3197 aa5.4□□□□□ -1.55
VLDLR-203ENST00000382100 TPRXLQ17RH7 258 aa5.39□□□□□ -1.55
VLDLR-203ENST00000382100 KRTAP10-1P60331 282 aa5.39□□□□□ -1.55
VLDLR-203ENST00000382100 REV3LO60673 3130 aa5.38□□□□□ -1.55
VLDLR-203ENST00000382100 MEGF8Q7Z7M0 2845 aa5.36□□□□□ -1.55
VLDLR-203ENST00000382100 VPS13AQ96RL7 3174 aa5.33□□□□□ -1.56
VLDLR-203ENST00000382100 A8MU10 97 aa5.33□□□□□ -1.56
VLDLR-203ENST00000382100 ADGRG4Q8IZF6 3080 aa5.28□□□□□ -1.56
VLDLR-203ENST00000382100 KRTAP13-2Q52LG2 175 aa5.27□□□□□ -1.57
VLDLR-203ENST00000382100 ATMQ13315 3056 aa5.26□□□□□ -1.57
VLDLR-203ENST00000382100 KRTAP10-2P60368 255 aa5.25□□□□□ -1.57
VLDLR-203ENST00000382100 CELSR1Q9NYQ6 3014 aa5.25□□□□□ -1.57
VLDLR-203ENST00000382100 KRTAP13-4Q3LI77 160 aa5.22□□□□□ -1.57
VLDLR-203ENST00000382100 HRNRQ86YZ3 2850 aaPredicted RBP5.22□□□□□ -1.57
VLDLR-203ENST00000382100 FREM2Q5SZK8 3169 aa5.2□□□□□ -1.58
VLDLR-203ENST00000382100 KRTAP10-8P60410 259 aa5.17□□□□□ -1.58
VLDLR-203ENST00000382100 KRTAP23-1A1A580 65 aa5.17□□□□□ -1.58
VLDLR-203ENST00000382100 XP32Q5T750 250 aa5.15□□□□□ -1.59
VLDLR-203ENST00000382100 FBN1P35555 2871 aaKnown RBP5.15□□□□□ -1.59
VLDLR-203ENST00000382100 WDFY4Q6ZS81 3184 aa5.14□□□□□ -1.59
VLDLR-203ENST00000382100 OTOGQ6ZRI0 2925 aa5.11□□□□□ -1.59
VLDLR-203ENST00000382100 KRTAP7-1Q8IUC3 87 aa5.05□□□□□ -1.6
VLDLR-203ENST00000382100 KRTAP1-4P0C5Y4 121 aa5.03□□□□□ -1.6
VLDLR-203ENST00000382100 KRTAP13-3Q3SY46 172 aa5.03□□□□□ -1.6
VLDLR-203ENST00000382100 BOD1L1Q8NFC6 3051 aa5.02□□□□□ -1.61
VLDLR-203ENST00000382100 KRTAP10-10P60014 251 aa4.98□□□□□ -1.61
VLDLR-203ENST00000382100 RANBP2P49792 3224 aaKnown RBP4.97□□□□□ -1.61
VLDLR-203ENST00000382100 MKI67P46013 3256 aaKnown RBP4.96□□□□□ -1.62
VLDLR-203ENST00000382100 A0A1B0GVY2 172 aa4.95□□□□□ -1.62
VLDLR-203ENST00000382100 HTTP42858 3142 aa4.94□□□□□ -1.62
VLDLR-203ENST00000382100 XIRP2A4UGR9 3374 aa4.91□□□□□ -1.62
VLDLR-203ENST00000382100 BRCA2P51587 3418 aa4.91□□□□□ -1.62
VLDLR-203ENST00000382100 KRTAP19-4Q3LI73 84 aa4.89□□□□□ -1.63
VLDLR-203ENST00000382100 KRTAP12-2P59991 146 aa4.87□□□□□ -1.63
VLDLR-203ENST00000382100 KRTAP12-1P59990 96 aa4.85□□□□□ -1.63
VLDLR-203ENST00000382100 LAMA3Q16787 3333 aa4.79□□□□□ -1.64
VLDLR-203ENST00000382100 KRTAP15-1Q3LI76 137 aa4.76□□□□□ -1.65
VLDLR-203ENST00000382100 CFAP47Q6ZTR5 3102 aa4.76□□□□□ -1.65
VLDLR-203ENST00000382100 CDH23Q9H251 3354 aa4.73□□□□□ -1.65
VLDLR-203ENST00000382100 UNC80Q8N2C7 3258 aa4.71□□□□□ -1.66
VLDLR-203ENST00000382100 VCANP13611 3396 aa4.7□□□□□ -1.66
VLDLR-203ENST00000382100 SZT2Q5T011 3432 aa4.68□□□□□ -1.66
VLDLR-203ENST00000382100 COL6A3P12111 3177 aa4.65□□□□□ -1.66
VLDLR-203ENST00000382100 KRTAP10-12P60413 245 aa4.58□□□□□ -1.68
VLDLR-203ENST00000382100 EYSQ5T1H1 3165 aa4.57□□□□□ -1.68
VLDLR-203ENST00000382100 KRTAP10-6P60371 365 aaPredicted RBP4.57□□□□□ -1.68
VLDLR-203ENST00000382100 USP34Q70CQ2 3546 aa4.56□□□□□ -1.68
VLDLR-203ENST00000382100 SPTBN5Q9NRC6 3674 aaKnown RBP4.54□□□□□ -1.68
VLDLR-203ENST00000382100 SPEGQ15772 3267 aa4.54□□□□□ -1.68
VLDLR-203ENST00000382100 LOC400499M0QZD8 3231 aa4.51□□□□□ -1.69
VLDLR-203ENST00000382100 DNAH14Q0VDD8 3507 aa4.49□□□□□ -1.69
VLDLR-203ENST00000382100 CRCT1Q9UGL9 99 aa4.47□□□□□ -1.69
VLDLR-203ENST00000382100 KRTAP12-3P60328 96 aa4.46□□□□□ -1.7
VLDLR-203ENST00000382100 KRTAP3-1Q9BYR8 98 aa4.41□□□□□ -1.7
VLDLR-203ENST00000382100 MYO15AQ9UKN7 3530 aa4.39□□□□□ -1.71
VLDLR-203ENST00000382100 ZFHX3Q15911 3703 aa4.38□□□□□ -1.71
VLDLR-203ENST00000382100 CELSR3Q9NYQ7 3312 aa4.36□□□□□ -1.71
VLDLR-203ENST00000382100 MT3P25713 68 aa4.35□□□□□ -1.71
VLDLR-203ENST00000382100 KRTAP3-2Q9BYR7 98 aa4.3□□□□□ -1.72
VLDLR-203ENST00000382100 ZFHX4Q86UP3 3567 aa4.25□□□□□ -1.73
VLDLR-203ENST00000382100 MUC3AQ02505 3323 aa4.2□□□□□ -1.74
VLDLR-203ENST00000382100 KRTAP3-3Q9BYR6 98 aa4.18□□□□□ -1.74
VLDLR-203ENST00000382100 DMDP11532 3685 aa4.17□□□□□ -1.74
VLDLR-203ENST00000382100 DCHS1Q96JQ0 3298 aa4.17□□□□□ -1.74
VLDLR-203ENST00000382100 ASPMQ8IZT6 3477 aa4.1□□□□□ -1.75
VLDLR-203ENST00000382100 TRRAPQ9Y4A5 3859 aa4.1□□□□□ -1.75
VLDLR-203ENST00000382100 WDFY3Q8IZQ1 3526 aa4.09□□□□□ -1.75
VLDLR-203ENST00000382100 LORP23490 312 aaPredicted RBP4.09□□□□□ -1.76
VLDLR-203ENST00000382100 SPENQ96T58 3664 aaKnown RBP4.06□□□□□ -1.76
VLDLR-203ENST00000382100 LAMA5O15230 3695 aa4.06□□□□□ -1.76
VLDLR-203ENST00000382100 KRTAP10-5P60370 271 aa4.03□□□□□ -1.76
VLDLR-203ENST00000382100 NBPF19A0A087WUL8 3843 aa4.03□□□□□ -1.76
VLDLR-203ENST00000382100 MT1HL1P0DM35 61 aa3.99□□□□□ -1.77
VLDLR-203ENST00000382100 KRTAP8-1Q8IUC2 63 aa3.99□□□□□ -1.77
VLDLR-203ENST00000382100 LCE3AQ5TA76 89 aa3.98□□□□□ -1.77
VLDLR-203ENST00000382100 RELNP78509 3460 aa3.97□□□□□ -1.77
VLDLR-203ENST00000382100 SPRR2GQ9BYE4 73 aa3.97□□□□□ -1.77
VLDLR-203ENST00000382100 BSNQ9UPA5 3926 aa3.95□□□□□ -1.78
VLDLR-203ENST00000382100 KRTAP10-7P60409 375 aaPredicted RBP3.93□□□□□ -1.78
VLDLR-203ENST00000382100 ZNF469Q96JG9 3925 aaPredicted RBP3.92□□□□□ -1.78
VLDLR-203ENST00000382100 SMG1Q96Q15 3661 aaKnown RBP3.89□□□□□ -1.79
VLDLR-203ENST00000382100 AKAP9Q99996 3911 aa3.88□□□□□ -1.79
VLDLR-203ENST00000382100 LCE3CQ5T5A8 94 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms