RNA–Protein interactions for RNA: ENST00000380931.6

AP001043.1-202, humanhuman

TSL 2 BASIC

Gene AP001043.1, Length 5,027 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001043.1-202ENST00000380931 RPS29P62273 56 aaKnown RBP4.85□□□□□ -1.63
AP001043.1-202ENST00000380931 FLNCQ14315 2725 aa4.85□□□□□ -1.63
AP001043.1-202ENST00000380931 KRTAP16-1A8MUX0 517 aa4.84□□□□□ -1.63
AP001043.1-202ENST00000380931 COL12A1Q99715 3063 aa4.84□□□□□ -1.63
AP001043.1-202ENST00000380931 ITPR1Q14643 2758 aa4.84□□□□□ -1.63
AP001043.1-202ENST00000380931 SPATA8Q6RVD6 105 aa4.82□□□□□ -1.64
AP001043.1-202ENST00000380931 WDFY3Q8IZQ1 3526 aa4.81□□□□□ -1.64
AP001043.1-202ENST00000380931 Q6ZRN7 208 aaPredicted RBP4.8□□□□□ -1.64
AP001043.1-202ENST00000380931 DMXL1Q9Y485 3027 aa4.79□□□□□ -1.64
AP001043.1-202ENST00000380931 NOTCH2NLQ7Z3S9 236 aa4.79□□□□□ -1.64
AP001043.1-202ENST00000380931 ASH1LQ9NR48 2969 aaKnown RBP4.78□□□□□ -1.64
AP001043.1-202ENST00000380931 HRNRQ86YZ3 2850 aaPredicted RBP4.77□□□□□ -1.65
AP001043.1-202ENST00000380931 NDUFAF8A1L188 74 aa4.76□□□□□ -1.65
AP001043.1-202ENST00000380931 A8MUU9 505 aa4.76□□□□□ -1.65
AP001043.1-202ENST00000380931 KRTAP25-1Q3LHN0 102 aa4.76□□□□□ -1.65
AP001043.1-202ENST00000380931 KMT2BQ9UMN6 2715 aaPredicted RBP4.76□□□□□ -1.65
AP001043.1-202ENST00000380931 KRTAP11-1Q8IUC1 163 aa4.75□□□□□ -1.65
AP001043.1-202ENST00000380931 ZANQ9Y493 2812 aa4.75□□□□□ -1.65
AP001043.1-202ENST00000380931 C20orf166-AS1Q96NR2 134 aa4.73□□□□□ -1.65
AP001043.1-202ENST00000380931 ITPR2Q14571 2701 aa4.73□□□□□ -1.65
AP001043.1-202ENST00000380931 UTP20O75691 2785 aaKnown RBP4.73□□□□□ -1.65
AP001043.1-202ENST00000380931 KRTAP13-2Q52LG2 175 aa4.73□□□□□ -1.65
AP001043.1-202ENST00000380931 DCHS1Q96JQ0 3298 aa4.72□□□□□ -1.65
AP001043.1-202ENST00000380931 KRTAP21-3Q3LHN1 58 aa4.71□□□□□ -1.65
AP001043.1-202ENST00000380931 ZFHX3Q15911 3703 aa4.71□□□□□ -1.66
AP001043.1-202ENST00000380931 KRTAP13-1Q8IUC0 172 aa4.7□□□□□ -1.66
AP001043.1-202ENST00000380931 KRTAP7-1Q8IUC3 87 aa4.7□□□□□ -1.66
AP001043.1-202ENST00000380931 ZFHX4Q86UP3 3567 aa4.69□□□□□ -1.66
AP001043.1-202ENST00000380931 TENM4Q6N022 2769 aa4.67□□□□□ -1.66
AP001043.1-202ENST00000380931 ASPMQ8IZT6 3477 aa4.67□□□□□ -1.66
AP001043.1-202ENST00000380931 DMDP11532 3685 aa4.66□□□□□ -1.66
AP001043.1-202ENST00000380931 HIVEP1P15822 2718 aa4.66□□□□□ -1.66
AP001043.1-202ENST00000380931 FBN2P35556 2912 aa4.65□□□□□ -1.67
AP001043.1-202ENST00000380931 CELSR2Q9HCU4 2923 aa4.64□□□□□ -1.67
AP001043.1-202ENST00000380931 RELNP78509 3460 aa4.64□□□□□ -1.67
AP001043.1-202ENST00000380931 TNP1P09430 55 aa4.64□□□□□ -1.67
AP001043.1-202ENST00000380931 MUC3AQ02505 3323 aa4.63□□□□□ -1.67
AP001043.1-202ENST00000380931 APCP25054 2843 aa4.63□□□□□ -1.67
AP001043.1-202ENST00000380931 NF1P21359 2839 aa4.62□□□□□ -1.67
AP001043.1-202ENST00000380931 LAMA5O15230 3695 aa4.6□□□□□ -1.67
AP001043.1-202ENST00000380931 DCHS2Q6V1P9 2916 aa4.6□□□□□ -1.67
AP001043.1-202ENST00000380931 CSMD1Q96PZ7 3565 aa4.59□□□□□ -1.67
AP001043.1-202ENST00000380931 CRYBG3Q68DQ2 2970 aa4.58□□□□□ -1.68
AP001043.1-202ENST00000380931 SMG1Q96Q15 3661 aaKnown RBP4.58□□□□□ -1.68
AP001043.1-202ENST00000380931 NIPBLQ6KC79 2804 aaeCLIP4.57□□□□□ -1.68
AP001043.1-202ENST00000380931 MXRA5Q9NR99 2828 aa4.56□□□□□ -1.68
AP001043.1-202ENST00000380931 P0C880 135 aa4.53□□□□□ -1.68
AP001043.1-202ENST00000380931 XP32Q5T750 250 aa4.5□□□□□ -1.69
AP001043.1-202ENST00000380931 TENM3Q9P273 2699 aa4.5□□□□□ -1.69
AP001043.1-202ENST00000380931 KRTAP10-8P60410 259 aa4.5□□□□□ -1.69
AP001043.1-202ENST00000380931 PP632Q6XCG6 107 aa4.5□□□□□ -1.69
AP001043.1-202ENST00000380931 C10orf95Q9H7T3 257 aa4.49□□□□□ -1.69
AP001043.1-202ENST00000380931 KRTAP1-4P0C5Y4 121 aa4.49□□□□□ -1.69
AP001043.1-202ENST00000380931 CELSR1Q9NYQ6 3014 aa4.46□□□□□ -1.69
AP001043.1-202ENST00000380931 SVEP1Q4LDE5 3571 aa4.46□□□□□ -1.7
AP001043.1-202ENST00000380931 TPRXLQ17RH7 258 aa4.46□□□□□ -1.7
AP001043.1-202ENST00000380931 A0A1B0GVY2 172 aa4.44□□□□□ -1.7
AP001043.1-202ENST00000380931 KRTAP10-10P60014 251 aa4.41□□□□□ -1.7
AP001043.1-202ENST00000380931 SPENQ96T58 3664 aaKnown RBP4.4□□□□□ -1.7
AP001043.1-202ENST00000380931 PRO2289Q9P1D8 64 aa4.39□□□□□ -1.71
AP001043.1-202ENST00000380931 BSNQ9UPA5 3926 aa4.39□□□□□ -1.71
AP001043.1-202ENST00000380931 H0YAA0 97 aa4.38□□□□□ -1.71
AP001043.1-202ENST00000380931 TENM1Q9UKZ4 2725 aa4.37□□□□□ -1.71
AP001043.1-202ENST00000380931 KRTAP13-3Q3SY46 172 aa4.35□□□□□ -1.71
AP001043.1-202ENST00000380931 CUBNO60494 3623 aa4.34□□□□□ -1.71
AP001043.1-202ENST00000380931 SRRM2Q9UQ35 2752 aaKnown RBP4.33□□□□□ -1.72
AP001043.1-202ENST00000380931 TENM2Q9NT68 2774 aa4.32□□□□□ -1.72
AP001043.1-202ENST00000380931 VWFP04275 2813 aa4.3□□□□□ -1.72
AP001043.1-202ENST00000380931 PDZD2O15018 2839 aa4.27□□□□□ -1.73
AP001043.1-202ENST00000380931 KRTAP15-1Q3LI76 137 aa4.23□□□□□ -1.73
AP001043.1-202ENST00000380931 PKD1L1Q8TDX9 2849 aa4.21□□□□□ -1.73
AP001043.1-202ENST00000380931 FBN1P35555 2871 aaKnown RBP4.18□□□□□ -1.74
AP001043.1-202ENST00000380931 CSMD2Q7Z408 3487 aa4.18□□□□□ -1.74
AP001043.1-202ENST00000380931 TGP01266 2768 aa4.18□□□□□ -1.74
AP001043.1-202ENST00000380931 NBPF19A0A087WUL8 3843 aa4.18□□□□□ -1.74
AP001043.1-202ENST00000380931 OTOGQ6ZRI0 2925 aa4.16□□□□□ -1.74
AP001043.1-202ENST00000380931 ANK3Q12955 4377 aaKnown RBP4.13□□□□□ -1.75
AP001043.1-202ENST00000380931 KRTAP13-4Q3LI77 160 aa4.09□□□□□ -1.76
AP001043.1-202ENST00000380931 KRTAP12-2P59991 146 aa4.07□□□□□ -1.76
AP001043.1-202ENST00000380931 VPS13CQ709C8 3753 aa4.07□□□□□ -1.76
AP001043.1-202ENST00000380931 TRRAPQ9Y4A5 3859 aa4.06□□□□□ -1.76
AP001043.1-202ENST00000380931 KRTAP12-1P59990 96 aa4.03□□□□□ -1.76
AP001043.1-202ENST00000380931 FBN3Q75N90 2809 aa4□□□□□ -1.77
AP001043.1-202ENST00000380931 AKAP9Q99996 3911 aa3.97□□□□□ -1.77
AP001043.1-202ENST00000380931 ZNF469Q96JG9 3925 aaPredicted RBP3.97□□□□□ -1.77
AP001043.1-202ENST00000380931 KRTAP3-1Q9BYR8 98 aa3.96□□□□□ -1.77
AP001043.1-202ENST00000380931 MEGF8Q7Z7M0 2845 aa3.9□□□□□ -1.78
AP001043.1-202ENST00000380931 ALMS1Q8TCU4 4167 aa3.9□□□□□ -1.78
AP001043.1-202ENST00000380931 KRTAP10-6P60371 365 aaPredicted RBP3.87□□□□□ -1.79
AP001043.1-202ENST00000380931 MT1HL1P0DM35 61 aa3.84□□□□□ -1.79
AP001043.1-202ENST00000380931 HUWE1Q7Z6Z7 4374 aaKnown RBP3.82□□□□□ -1.8
AP001043.1-202ENST00000380931 COL7A1Q02388 2944 aa3.82□□□□□ -1.8
AP001043.1-202ENST00000380931 CSMD3Q7Z407 3707 aa3.82□□□□□ -1.8
AP001043.1-202ENST00000380931 KRTAP10-12P60413 245 aa3.78□□□□□ -1.81
AP001043.1-202ENST00000380931 CRCT1Q9UGL9 99 aa3.72□□□□□ -1.81
AP001043.1-202ENST00000380931 KRTAP3-2Q9BYR7 98 aa3.71□□□□□ -1.82
AP001043.1-202ENST00000380931 INE1O15225 51 aa3.7□□□□□ -1.82
AP001043.1-202ENST00000380931 KRTAP3-3Q9BYR6 98 aa3.69□□□□□ -1.82
AP001043.1-202ENST00000380931 DNAH9Q9NYC9 4486 aa3.68□□□□□ -1.82
AP001043.1-202ENST00000380931 KRTAP12-3P60328 96 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms