RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 RPS29P62273 56 aaKnown RBP5.75□□□□□ -1.49
CLCN4-202ENST00000380833 SPEGQ15772 3267 aa5.75□□□□□ -1.49
CLCN4-202ENST00000380833 DMXL2Q8TDJ6 3036 aa5.75□□□□□ -1.49
CLCN4-202ENST00000380833 INE1O15225 51 aa5.72□□□□□ -1.49
CLCN4-202ENST00000380833 DSPP15924 2871 aaKnown RBP5.71□□□□□ -1.49
CLCN4-202ENST00000380833 NSD1Q96L73 2696 aaPredicted RBP5.71□□□□□ -1.5
CLCN4-202ENST00000380833 USP34Q70CQ2 3546 aa5.7□□□□□ -1.5
CLCN4-202ENST00000380833 MYO15AQ9UKN7 3530 aa5.69□□□□□ -1.5
CLCN4-202ENST00000380833 LAMA1P25391 3075 aa5.68□□□□□ -1.5
CLCN4-202ENST00000380833 ITPR2Q14571 2701 aa5.67□□□□□ -1.5
CLCN4-202ENST00000380833 TPRXLQ17RH7 258 aa5.67□□□□□ -1.5
CLCN4-202ENST00000380833 EYSQ5T1H1 3165 aa5.66□□□□□ -1.5
CLCN4-202ENST00000380833 KALRNO60229 2985 aa5.66□□□□□ -1.5
CLCN4-202ENST00000380833 TACC2O95359 2948 aa5.66□□□□□ -1.5
CLCN4-202ENST00000380833 TNRC18O15417 2968 aaPredicted RBP5.66□□□□□ -1.5
CLCN4-202ENST00000380833 IGSF10Q6WRI0 2623 aa5.65□□□□□ -1.5
CLCN4-202ENST00000380833 XP32Q5T750 250 aa5.65□□□□□ -1.51
CLCN4-202ENST00000380833 UBR5O95071 2799 aaPredicted RBP5.64□□□□□ -1.51
CLCN4-202ENST00000380833 ASH1LQ9NR48 2969 aaKnown RBP5.64□□□□□ -1.51
CLCN4-202ENST00000380833 KRTAP13-1Q8IUC0 172 aa5.64□□□□□ -1.51
CLCN4-202ENST00000380833 SPTBN5Q9NRC6 3674 aaKnown RBP5.63□□□□□ -1.51
CLCN4-202ENST00000380833 PRO2289Q9P1D8 64 aa5.63□□□□□ -1.51
CLCN4-202ENST00000380833 KRTAP15-1Q3LI76 137 aa5.63□□□□□ -1.51
CLCN4-202ENST00000380833 HIVEP1P15822 2718 aa5.61□□□□□ -1.51
CLCN4-202ENST00000380833 APCP25054 2843 aa5.57□□□□□ -1.52
CLCN4-202ENST00000380833 LRBAP50851 2863 aa5.56□□□□□ -1.52
CLCN4-202ENST00000380833 KRTAP23-1A1A580 65 aa5.55□□□□□ -1.52
CLCN4-202ENST00000380833 UTP20O75691 2785 aaKnown RBP5.54□□□□□ -1.52
CLCN4-202ENST00000380833 ATMQ13315 3056 aa5.54□□□□□ -1.52
CLCN4-202ENST00000380833 BOD1L1Q8NFC6 3051 aa5.53□□□□□ -1.52
CLCN4-202ENST00000380833 WDFY3Q8IZQ1 3526 aa5.53□□□□□ -1.52
CLCN4-202ENST00000380833 FRYLO94915 3013 aa5.51□□□□□ -1.53
CLCN4-202ENST00000380833 COL12A1Q99715 3063 aa5.5□□□□□ -1.53
CLCN4-202ENST00000380833 KRTAP12-2P59991 146 aa5.48□□□□□ -1.53
CLCN4-202ENST00000380833 ITPR1Q14643 2758 aa5.48□□□□□ -1.53
CLCN4-202ENST00000380833 KRTAP1-4P0C5Y4 121 aa5.45□□□□□ -1.54
CLCN4-202ENST00000380833 ASPMQ8IZT6 3477 aa5.44□□□□□ -1.54
CLCN4-202ENST00000380833 TENM4Q6N022 2769 aa5.44□□□□□ -1.54
CLCN4-202ENST00000380833 KRTAP13-4Q3LI77 160 aa5.42□□□□□ -1.54
CLCN4-202ENST00000380833 FLNCQ14315 2725 aa5.4□□□□□ -1.55
CLCN4-202ENST00000380833 KRTAP13-3Q3SY46 172 aa5.4□□□□□ -1.55
CLCN4-202ENST00000380833 ADGRG4Q8IZF6 3080 aa5.4□□□□□ -1.55
CLCN4-202ENST00000380833 CRCT1Q9UGL9 99 aa5.39□□□□□ -1.55
CLCN4-202ENST00000380833 DMXL1Q9Y485 3027 aa5.38□□□□□ -1.55
CLCN4-202ENST00000380833 CELSR2Q9HCU4 2923 aa5.36□□□□□ -1.55
CLCN4-202ENST00000380833 ZZEF1O43149 2961 aa5.36□□□□□ -1.55
CLCN4-202ENST00000380833 KRTAP12-1P59990 96 aa5.35□□□□□ -1.55
CLCN4-202ENST00000380833 DCHS1Q96JQ0 3298 aa5.33□□□□□ -1.56
CLCN4-202ENST00000380833 TENM2Q9NT68 2774 aa5.31□□□□□ -1.56
CLCN4-202ENST00000380833 NBEAQ8NFP9 2946 aa5.31□□□□□ -1.56
CLCN4-202ENST00000380833 TENM1Q9UKZ4 2725 aa5.29□□□□□ -1.56
CLCN4-202ENST00000380833 LOC400499M0QZD8 3231 aa5.29□□□□□ -1.56
CLCN4-202ENST00000380833 ZFHX4Q86UP3 3567 aa5.28□□□□□ -1.56
CLCN4-202ENST00000380833 NBPF19A0A087WUL8 3843 aa5.27□□□□□ -1.57
CLCN4-202ENST00000380833 DCHS2Q6V1P9 2916 aa5.26□□□□□ -1.57
CLCN4-202ENST00000380833 LAMA5O15230 3695 aa5.22□□□□□ -1.57
CLCN4-202ENST00000380833 CSMD1Q96PZ7 3565 aa5.2□□□□□ -1.58
CLCN4-202ENST00000380833 CELSR1Q9NYQ6 3014 aa5.19□□□□□ -1.58
CLCN4-202ENST00000380833 NF1P21359 2839 aa5.17□□□□□ -1.58
CLCN4-202ENST00000380833 PKD1L1Q8TDX9 2849 aa5.17□□□□□ -1.58
CLCN4-202ENST00000380833 RELNP78509 3460 aa5.16□□□□□ -1.58
CLCN4-202ENST00000380833 DMDP11532 3685 aa5.16□□□□□ -1.58
CLCN4-202ENST00000380833 VWFP04275 2813 aa5.16□□□□□ -1.58
CLCN4-202ENST00000380833 HRNRQ86YZ3 2850 aaPredicted RBP5.12□□□□□ -1.59
CLCN4-202ENST00000380833 TENM3Q9P273 2699 aa5.11□□□□□ -1.59
CLCN4-202ENST00000380833 ZANQ9Y493 2812 aa5.1□□□□□ -1.59
CLCN4-202ENST00000380833 TGP01266 2768 aa5.06□□□□□ -1.6
CLCN4-202ENST00000380833 NIPBLQ6KC79 2804 aaeCLIP5.04□□□□□ -1.6
CLCN4-202ENST00000380833 SMG1Q96Q15 3661 aaKnown RBP5.04□□□□□ -1.6
CLCN4-202ENST00000380833 FBN2P35556 2912 aa5.03□□□□□ -1.6
CLCN4-202ENST00000380833 KRTAP10-6P60371 365 aaPredicted RBP5.03□□□□□ -1.6
CLCN4-202ENST00000380833 KRTAP3-1Q9BYR8 98 aa5.01□□□□□ -1.61
CLCN4-202ENST00000380833 PDZD2O15018 2839 aa5□□□□□ -1.61
CLCN4-202ENST00000380833 MUC3AQ02505 3323 aa5□□□□□ -1.61
CLCN4-202ENST00000380833 SVEP1Q4LDE5 3571 aa4.99□□□□□ -1.61
CLCN4-202ENST00000380833 ZFHX3Q15911 3703 aa4.99□□□□□ -1.61
CLCN4-202ENST00000380833 CUBNO60494 3623 aa4.99□□□□□ -1.61
CLCN4-202ENST00000380833 SPENQ96T58 3664 aaKnown RBP4.96□□□□□ -1.62
CLCN4-202ENST00000380833 MXRA5Q9NR99 2828 aa4.88□□□□□ -1.63
CLCN4-202ENST00000380833 KRTAP4-5Q9BYR2 181 aa4.87□□□□□ -1.63
CLCN4-202ENST00000380833 LORP23490 312 aaPredicted RBP4.85□□□□□ -1.63
CLCN4-202ENST00000380833 SRRM2Q9UQ35 2752 aaKnown RBP4.84□□□□□ -1.63
CLCN4-202ENST00000380833 CSMD2Q7Z408 3487 aa4.81□□□□□ -1.64
CLCN4-202ENST00000380833 KRTAP10-12P60413 245 aa4.8□□□□□ -1.64
CLCN4-202ENST00000380833 KRTAP3-2Q9BYR7 98 aa4.78□□□□□ -1.64
CLCN4-202ENST00000380833 OTOGQ6ZRI0 2925 aa4.73□□□□□ -1.65
CLCN4-202ENST00000380833 KRTAP10-5P60370 271 aa4.69□□□□□ -1.66
CLCN4-202ENST00000380833 BSNQ9UPA5 3926 aa4.69□□□□□ -1.66
CLCN4-202ENST00000380833 MEGF8Q7Z7M0 2845 aa4.65□□□□□ -1.66
CLCN4-202ENST00000380833 KRTAP3-3Q9BYR6 98 aa4.65□□□□□ -1.66
CLCN4-202ENST00000380833 FBN1P35555 2871 aaKnown RBP4.65□□□□□ -1.67
CLCN4-202ENST00000380833 MT1HL1P0DM35 61 aa4.65□□□□□ -1.67
CLCN4-202ENST00000380833 ANK3Q12955 4377 aaKnown RBP4.63□□□□□ -1.67
CLCN4-202ENST00000380833 LCE3AQ5TA76 89 aa4.63□□□□□ -1.67
CLCN4-202ENST00000380833 FBN3Q75N90 2809 aa4.62□□□□□ -1.67
CLCN4-202ENST00000380833 KRTAP12-3P60328 96 aa4.62□□□□□ -1.67
CLCN4-202ENST00000380833 COL7A1Q02388 2944 aa4.62□□□□□ -1.67
CLCN4-202ENST00000380833 KRTAP8-1Q8IUC2 63 aa4.62□□□□□ -1.67
CLCN4-202ENST00000380833 VPS13CQ709C8 3753 aa4.59□□□□□ -1.67
CLCN4-202ENST00000380833 CSMD3Q7Z407 3707 aa4.59□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms