RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 H0YAA0 97 aa4.77□□□□□ -1.65
PCDH9-202ENST00000377865 M0QZ58 72 aa4.76□□□□□ -1.65
PCDH9-202ENST00000377865 Q5VSD8 79 aa4.76□□□□□ -1.65
PCDH9-202ENST00000377865 DMXL1Q9Y485 3027 aa4.76□□□□□ -1.65
PCDH9-202ENST00000377865 MAST4O15021 2626 aa4.73□□□□□ -1.65
PCDH9-202ENST00000377865 SEC61BP60468 96 aaKnown RBP4.73□□□□□ -1.65
PCDH9-202ENST00000377865 FLNCQ14315 2725 aa4.72□□□□□ -1.65
PCDH9-202ENST00000377865 UBR5O95071 2799 aaPredicted RBP4.72□□□□□ -1.65
PCDH9-202ENST00000377865 APCP25054 2843 aa4.72□□□□□ -1.65
PCDH9-202ENST00000377865 COL12A1Q99715 3063 aa4.71□□□□□ -1.65
PCDH9-202ENST00000377865 DCHS1Q96JQ0 3298 aa4.7□□□□□ -1.66
PCDH9-202ENST00000377865 ITPR2Q14571 2701 aa4.7□□□□□ -1.66
PCDH9-202ENST00000377865 ZFHX4Q86UP3 3567 aa4.68□□□□□ -1.66
PCDH9-202ENST00000377865 CFAP47Q6ZTR5 3102 aa4.67□□□□□ -1.66
PCDH9-202ENST00000377865 MGAM2Q2M2H8 2515 aa4.66□□□□□ -1.66
PCDH9-202ENST00000377865 SMG1Q96Q15 3661 aaKnown RBP4.66□□□□□ -1.66
PCDH9-202ENST00000377865 FLNBO75369 2602 aaKnown RBP4.66□□□□□ -1.66
PCDH9-202ENST00000377865 DCHS2Q6V1P9 2916 aa4.65□□□□□ -1.66
PCDH9-202ENST00000377865 ZANQ9Y493 2812 aa4.65□□□□□ -1.67
PCDH9-202ENST00000377865 NDUFAF8A1L188 74 aa4.65□□□□□ -1.67
PCDH9-202ENST00000377865 CSMD1Q96PZ7 3565 aa4.64□□□□□ -1.67
PCDH9-202ENST00000377865 NBEAL1Q6ZS30 2694 aa4.63□□□□□ -1.67
PCDH9-202ENST00000377865 ASPMQ8IZT6 3477 aa4.62□□□□□ -1.67
PCDH9-202ENST00000377865 BAHCC1Q9P281 2608 aa4.62□□□□□ -1.67
PCDH9-202ENST00000377865 NSD1Q96L73 2696 aaPredicted RBP4.62□□□□□ -1.67
PCDH9-202ENST00000377865 BSNQ9UPA5 3926 aa4.62□□□□□ -1.67
PCDH9-202ENST00000377865 DMDP11532 3685 aa4.62□□□□□ -1.67
PCDH9-202ENST00000377865 ANK3Q12955 4377 aaKnown RBP4.61□□□□□ -1.67
PCDH9-202ENST00000377865 FBN2P35556 2912 aa4.6□□□□□ -1.67
PCDH9-202ENST00000377865 MXRA5Q9NR99 2828 aa4.58□□□□□ -1.68
PCDH9-202ENST00000377865 ASH1LQ9NR48 2969 aaKnown RBP4.58□□□□□ -1.68
PCDH9-202ENST00000377865 NIPBLQ6KC79 2804 aaeCLIP4.58□□□□□ -1.68
PCDH9-202ENST00000377865 NOTCH1P46531 2555 aa4.57□□□□□ -1.68
PCDH9-202ENST00000377865 XP32Q5T750 250 aa4.56□□□□□ -1.68
PCDH9-202ENST00000377865 STAB1Q9NY15 2570 aa4.54□□□□□ -1.68
PCDH9-202ENST00000377865 RELNP78509 3460 aa4.54□□□□□ -1.68
PCDH9-202ENST00000377865 C10orf95Q9H7T3 257 aa4.54□□□□□ -1.68
PCDH9-202ENST00000377865 PP632Q6XCG6 107 aa4.53□□□□□ -1.68
PCDH9-202ENST00000377865 HIVEP1P15822 2718 aa4.53□□□□□ -1.68
PCDH9-202ENST00000377865 COL6A5A8TX70 2615 aa4.52□□□□□ -1.69
PCDH9-202ENST00000377865 P0C880 135 aa4.51□□□□□ -1.69
PCDH9-202ENST00000377865 CELSR1Q9NYQ6 3014 aa4.51□□□□□ -1.69
PCDH9-202ENST00000377865 PLAC4Q8WY50 150 aa4.51□□□□□ -1.69
PCDH9-202ENST00000377865 LAMA5O15230 3695 aa4.5□□□□□ -1.69
PCDH9-202ENST00000377865 PDZD2O15018 2839 aa4.49□□□□□ -1.69
PCDH9-202ENST00000377865 KRTAP21-3Q3LHN1 58 aa4.49□□□□□ -1.69
PCDH9-202ENST00000377865 CELSR2Q9HCU4 2923 aa4.49□□□□□ -1.69
PCDH9-202ENST00000377865 STAB2Q8WWQ8 2551 aa4.48□□□□□ -1.69
PCDH9-202ENST00000377865 M0R2T5 61 aa4.48□□□□□ -1.69
PCDH9-202ENST00000377865 CRYBG3Q68DQ2 2970 aa4.47□□□□□ -1.69
PCDH9-202ENST00000377865 SPENQ96T58 3664 aaKnown RBP4.46□□□□□ -1.7
PCDH9-202ENST00000377865 NF1P21359 2839 aa4.45□□□□□ -1.7
PCDH9-202ENST00000377865 KRTAP3-1Q9BYR8 98 aa4.45□□□□□ -1.7
PCDH9-202ENST00000377865 DMBT1Q9UGM3 2413 aaPredicted RBP4.45□□□□□ -1.7
PCDH9-202ENST00000377865 TNP1P09430 55 aa4.45□□□□□ -1.7
PCDH9-202ENST00000377865 TPRXLQ17RH7 258 aa4.43□□□□□ -1.7
PCDH9-202ENST00000377865 TENM3Q9P273 2699 aa4.41□□□□□ -1.7
PCDH9-202ENST00000377865 AKAP9Q99996 3911 aa4.4□□□□□ -1.7
PCDH9-202ENST00000377865 SVEP1Q4LDE5 3571 aa4.4□□□□□ -1.7
PCDH9-202ENST00000377865 KRTAP12-2P59991 146 aa4.4□□□□□ -1.71
PCDH9-202ENST00000377865 A0A1B0GVY2 172 aa4.39□□□□□ -1.71
PCDH9-202ENST00000377865 KRTAP10-8P60410 259 aa4.38□□□□□ -1.71
PCDH9-202ENST00000377865 KRTAP12-1P59990 96 aa4.35□□□□□ -1.71
PCDH9-202ENST00000377865 HUWE1Q7Z6Z7 4374 aaKnown RBP4.35□□□□□ -1.71
PCDH9-202ENST00000377865 KRTAP10-6P60371 365 aaPredicted RBP4.34□□□□□ -1.72
PCDH9-202ENST00000377865 FLG2Q5D862 2391 aaPredicted RBP4.32□□□□□ -1.72
PCDH9-202ENST00000377865 TGP01266 2768 aa4.31□□□□□ -1.72
PCDH9-202ENST00000377865 KRTAP13-4Q3LI77 160 aa4.3□□□□□ -1.72
PCDH9-202ENST00000377865 MUC3AQ02505 3323 aa4.29□□□□□ -1.72
PCDH9-202ENST00000377865 ZFHX3Q15911 3703 aa4.28□□□□□ -1.72
PCDH9-202ENST00000377865 NBPF19A0A087WUL8 3843 aa4.28□□□□□ -1.72
PCDH9-202ENST00000377865 VPS13CQ709C8 3753 aa4.27□□□□□ -1.73
PCDH9-202ENST00000377865 TENM1Q9UKZ4 2725 aa4.27□□□□□ -1.73
PCDH9-202ENST00000377865 TENM4Q6N022 2769 aa4.27□□□□□ -1.73
PCDH9-202ENST00000377865 KRTAP15-1Q3LI76 137 aa4.25□□□□□ -1.73
PCDH9-202ENST00000377865 VWFP04275 2813 aa4.24□□□□□ -1.73
PCDH9-202ENST00000377865 KRTAP3-2Q9BYR7 98 aa4.23□□□□□ -1.73
PCDH9-202ENST00000377865 OTOGQ6ZRI0 2925 aa4.22□□□□□ -1.73
PCDH9-202ENST00000377865 ALMS1Q8TCU4 4167 aa4.22□□□□□ -1.73
PCDH9-202ENST00000377865 KRTAP3-3Q9BYR6 98 aa4.22□□□□□ -1.73
PCDH9-202ENST00000377865 CSMD2Q7Z408 3487 aa4.17□□□□□ -1.74
PCDH9-202ENST00000377865 TRRAPQ9Y4A5 3859 aa4.16□□□□□ -1.74
PCDH9-202ENST00000377865 DNAH3Q8TD57 4116 aa4.14□□□□□ -1.75
PCDH9-202ENST00000377865 KRTAP10-4P60372 401 aaPredicted RBP4.12□□□□□ -1.75
PCDH9-202ENST00000377865 DNAH9Q9NYC9 4486 aa4.11□□□□□ -1.75
PCDH9-202ENST00000377865 PKD1L1Q8TDX9 2849 aa4.11□□□□□ -1.75
PCDH9-202ENST00000377865 CUBNO60494 3623 aa4.1□□□□□ -1.75
PCDH9-202ENST00000377865 FBN1P35555 2871 aaKnown RBP4.1□□□□□ -1.75
PCDH9-202ENST00000377865 TENM2Q9NT68 2774 aa4.09□□□□□ -1.75
PCDH9-202ENST00000377865 DNAH10Q8IVF4 4471 aa4.09□□□□□ -1.75
PCDH9-202ENST00000377865 DNAH17Q9UFH2 4485 aa4.09□□□□□ -1.76
PCDH9-202ENST00000377865 DNAH1Q9P2D7 4330 aa4.08□□□□□ -1.76
PCDH9-202ENST00000377865 ZNF469Q96JG9 3925 aaPredicted RBP4.07□□□□□ -1.76
PCDH9-202ENST00000377865 VPS13DQ5THJ4 4388 aa4.04□□□□□ -1.76
PCDH9-202ENST00000377865 SRRM2Q9UQ35 2752 aaKnown RBP4.04□□□□□ -1.76
PCDH9-202ENST00000377865 DNAH2Q9P225 4427 aa4.02□□□□□ -1.77
PCDH9-202ENST00000377865 MT1HL1P0DM35 61 aa4.02□□□□□ -1.77
PCDH9-202ENST00000377865 KRTAP10-10P60014 251 aa4.01□□□□□ -1.77
PCDH9-202ENST00000377865 PRO2289Q9P1D8 64 aa4.01□□□□□ -1.77
PCDH9-202ENST00000377865 MEGF8Q7Z7M0 2845 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 392.6 ms