RNA–Protein interactions for RNA: ENST00000377798.8

POLR1E-202, Transcript of RNA polymerase I subunit E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR1E, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1E-202ENST00000377798 KRTAP10-8P60410 259 aa8.43□□□□□ -1.06
POLR1E-202ENST00000377798 IGHV6-1A0A0B4J1U7 121 aa8.41□□□□□ -1.06
POLR1E-202ENST00000377798 WFDC13Q8IUB5 93 aa8.4□□□□□ -1.06
POLR1E-202ENST00000377798 MMP24-AS1A0A0U1RRL7 71 aa8.4□□□□□ -1.07
POLR1E-202ENST00000377798 KRTAP29-1A8MX34 341 aaPredicted RBP8.39□□□□□ -1.07
POLR1E-202ENST00000377798 CASC2Q6XLA1 102 aa8.38□□□□□ -1.07
POLR1E-202ENST00000377798 SMIM20Q8N5G0 67 aa8.38□□□□□ -1.07
POLR1E-202ENST00000377798 C8orf17Q9NRJ1 99 aa8.38□□□□□ -1.07
POLR1E-202ENST00000377798 FLG2Q5D862 2391 aaPredicted RBP8.38□□□□□ -1.07
POLR1E-202ENST00000377798 SERP2Q8N6R1 65 aa8.37□□□□□ -1.07
POLR1E-202ENST00000377798 HERC2O95714 4834 aa8.37□□□□□ -1.07
POLR1E-202ENST00000377798 hDV103S1A0JD37 113 aa8.36□□□□□ -1.07
POLR1E-202ENST00000377798 TRAV7A0A075B6U4 112 aa8.35□□□□□ -1.07
POLR1E-202ENST00000377798 KRTAP4-5Q9BYR2 181 aa8.35□□□□□ -1.07
POLR1E-202ENST00000377798 COX7CP15954 63 aa8.34□□□□□ -1.07
POLR1E-202ENST00000377798 NOTCH2NLQ7Z3S9 236 aa8.34□□□□□ -1.07
POLR1E-202ENST00000377798 OCR1Q9BZK8 76 aa8.34□□□□□ -1.07
POLR1E-202ENST00000377798 C8orf87E5RJ46 101 aa8.33□□□□□ -1.08
POLR1E-202ENST00000377798 UQCRQO14949 82 aa8.32□□□□□ -1.08
POLR1E-202ENST00000377798 MT1HL1P0DM35 61 aa8.32□□□□□ -1.08
POLR1E-202ENST00000377798 CCDC179H3BU77 68 aa8.3□□□□□ -1.08
POLR1E-202ENST00000377798 TMEM254Q8TBM7 123 aa8.3□□□□□ -1.08
POLR1E-202ENST00000377798 OXTP01178 125 aa8.3□□□□□ -1.08
POLR1E-202ENST00000377798 LINC00313P59037 77 aa8.3□□□□□ -1.08
POLR1E-202ENST00000377798 MRPL34Q9BQ48 92 aaKnown RBP8.29□□□□□ -1.08
POLR1E-202ENST00000377798 ABCA13Q86UQ4 5058 aa8.29□□□□□ -1.08
POLR1E-202ENST00000377798 RETNLBQ9BQ08 111 aa8.27□□□□□ -1.09
POLR1E-202ENST00000377798 DMBT1Q9UGM3 2413 aaPredicted RBP8.23□□□□□ -1.09
POLR1E-202ENST00000377798 KRTAP16-1A8MUX0 517 aa8.22□□□□□ -1.09
POLR1E-202ENST00000377798 NDUFS5O43920 106 aa8.22□□□□□ -1.09
POLR1E-202ENST00000377798 C20orf197Q8N268 126 aa8.21□□□□□ -1.09
POLR1E-202ENST00000377798 TP53AIP1Q9HCN2 124 aa8.21□□□□□ -1.09
POLR1E-202ENST00000377798 C5orf47Q569G3 176 aa8.19□□□□□ -1.1
POLR1E-202ENST00000377798 Q8N9P0 234 aaPredicted RBP8.19□□□□□ -1.1
POLR1E-202ENST00000377798 PCLOQ9Y6V0 5065 aa8.19□□□□□ -1.1
POLR1E-202ENST00000377798 FP248Q71RG6 208 aaPredicted RBP8.18□□□□□ -1.1
POLR1E-202ENST00000377798 KLKP1Q107X0 134 aa8.17□□□□□ -1.1
POLR1E-202ENST00000377798 TRAV22A0A0B4J277 110 aa8.15□□□□□ -1.1
POLR1E-202ENST00000377798 SNURFQ9Y675 71 aa8.15□□□□□ -1.1
POLR1E-202ENST00000377798 C9orf92A6NGG3 77 aa8.15□□□□□ -1.11
POLR1E-202ENST00000377798 A0A0U1RQV1 116 aa8.14□□□□□ -1.11
POLR1E-202ENST00000377798 H0Y9P7 68 aa8.14□□□□□ -1.11
POLR1E-202ENST00000377798 MP68P56378 58 aa8.14□□□□□ -1.11
POLR1E-202ENST00000377798 CYSTM1Q9H1C7 97 aa8.14□□□□□ -1.11
POLR1E-202ENST00000377798 IGLV7-46A0A075B6I9 117 aa8.1□□□□□ -1.11
POLR1E-202ENST00000377798 H3BPC8 53 aa8.1□□□□□ -1.11
POLR1E-202ENST00000377798 ZCCHC13Q8WW36 166 aaKnown RBP8.09□□□□□ -1.11
POLR1E-202ENST00000377798 LINC00208Q96KT6 92 aa8.09□□□□□ -1.11
POLR1E-202ENST00000377798 Q5W150 140 aa8.09□□□□□ -1.12
POLR1E-202ENST00000377798 J3QL48 77 aa8.08□□□□□ -1.12
POLR1E-202ENST00000377798 KRTAP13-3Q3SY46 172 aa8.08□□□□□ -1.12
POLR1E-202ENST00000377798 C20orf166-AS1Q96NR2 134 aa8.07□□□□□ -1.12
POLR1E-202ENST00000377798 A8MUU9 505 aa8.06□□□□□ -1.12
POLR1E-202ENST00000377798 NDUFC1O43677 76 aa8.06□□□□□ -1.12
POLR1E-202ENST00000377798 C1orf64Q8NEQ6 169 aa8.06□□□□□ -1.12
POLR1E-202ENST00000377798 H7BZZ5 65 aa8.05□□□□□ -1.12
POLR1E-202ENST00000377798 PRR4Q16378 134 aa8.05□□□□□ -1.12
POLR1E-202ENST00000377798 Q75L30 129 aa8□□□□□ -1.13
POLR1E-202ENST00000377798 LOC101927531A0A1B0GV80 90 aa8□□□□□ -1.13
POLR1E-202ENST00000377798 TMEM258P61165 79 aa8□□□□□ -1.13
POLR1E-202ENST00000377798 TPRXLQ17RH7 258 aa7.97□□□□□ -1.13
POLR1E-202ENST00000377798 XP32Q5T750 250 aa7.97□□□□□ -1.13
POLR1E-202ENST00000377798 LPAP08519 4548 aa7.95□□□□□ -1.14
POLR1E-202ENST00000377798 IGKV2-30P06310 120 aa7.94□□□□□ -1.14
POLR1E-202ENST00000377798 CYP4F30PQ9H0H9 118 aa7.94□□□□□ -1.14
POLR1E-202ENST00000377798 RPL37P61927 97 aaKnown RBP7.93□□□□□ -1.14
POLR1E-202ENST00000377798 FAM236DA0A1B0GTK5 79 aa7.92□□□□□ -1.14
POLR1E-202ENST00000377798 FAM236CP0DP71 79 aa7.92□□□□□ -1.14
POLR1E-202ENST00000377798 PCOTHQ58A44 107 aa7.92□□□□□ -1.14
POLR1E-202ENST00000377798 LRP2P98164 4655 aa7.9□□□□□ -1.15
POLR1E-202ENST00000377798 IGKV2D-30A0A075B6S6 120 aa7.89□□□□□ -1.15
POLR1E-202ENST00000377798 ATP5EP56381 51 aaPredicted RBP7.88□□□□□ -1.15
POLR1E-202ENST00000377798 ATP11AUNQ6ZP68 121 aa7.88□□□□□ -1.15
POLR1E-202ENST00000377798 SPANXA2-OT1Q8N9U9 137 aa7.87□□□□□ -1.15
POLR1E-202ENST00000377798 C7orf65Q6ZTY9 151 aa7.87□□□□□ -1.15
POLR1E-202ENST00000377798 HERC1Q15751 4861 aa7.85□□□□□ -1.15
POLR1E-202ENST00000377798 HRES1P13985 223 aa7.81□□□□□ -1.16
POLR1E-202ENST00000377798 SPINK7P58062 85 aa7.79□□□□□ -1.16
POLR1E-202ENST00000377798 HMCN2Q8NDA2 5059 aa7.76□□□□□ -1.17
POLR1E-202ENST00000377798 SERP1Q9Y6X1 66 aa7.75□□□□□ -1.17
POLR1E-202ENST00000377798 RPS28P62857 69 aaKnown RBP7.72□□□□□ -1.17
POLR1E-202ENST00000377798 DMAC1Q96GE9 116 aa7.7□□□□□ -1.18
POLR1E-202ENST00000377798 C4orf26Q17RF5 130 aa7.69□□□□□ -1.18
POLR1E-202ENST00000377798 MUC17Q685J3 4493 aa7.69□□□□□ -1.18
POLR1E-202ENST00000377798 SEC61BP60468 96 aaKnown RBP7.68□□□□□ -1.18
POLR1E-202ENST00000377798 ACYP2P14621 99 aa7.64□□□□□ -1.19
POLR1E-202ENST00000377798 COA5Q86WW8 74 aa7.64□□□□□ -1.19
POLR1E-202ENST00000377798 A8MUN3 132 aa7.62□□□□□ -1.19
POLR1E-202ENST00000377798 COX6B2Q6YFQ2 88 aa7.6□□□□□ -1.19
POLR1E-202ENST00000377798 KRTAP3-1Q9BYR8 98 aa7.58□□□□□ -1.2
POLR1E-202ENST00000377798 SMIM26A0A096LP01 95 aa7.53□□□□□ -1.2
POLR1E-202ENST00000377798 CHKB-CPT1BH3BT56 60 aa7.53□□□□□ -1.2
POLR1E-202ENST00000377798 MPLKIPQ8TAP9 179 aa7.53□□□□□ -1.2
POLR1E-202ENST00000377798 KRTAP4-1Q9BYQ7 146 aa7.51□□□□□ -1.21
POLR1E-202ENST00000377798 RBM12B-AS1Q9P1G2 102 aa7.49□□□□□ -1.21
POLR1E-202ENST00000377798 MUC2Q02817 5179 aa7.44□□□□□ -1.22
POLR1E-202ENST00000377798 H1FX-AS1Q4G0G2 97 aa7.41□□□□□ -1.22
POLR1E-202ENST00000377798 Q1T7F1 81 aa7.4□□□□□ -1.23
POLR1E-202ENST00000377798 SPTSSBQ8NFR3 76 aa7.37□□□□□ -1.23
POLR1E-202ENST00000377798 V9GYY9 64 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms