RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 A8MWP4 228 aa12.23□□□□□ -0.45
HLA-C-201ENST00000376228 PRR26Q8N8Z3 221 aa12.21□□□□□ -0.45
HLA-C-201ENST00000376228 PRR15Q8IV56 129 aa12.2□□□□□ -0.46
HLA-C-201ENST00000376228 NDUFB1O75438 58 aa12.16□□□□□ -0.46
HLA-C-201ENST00000376228 SPINK1P00995 79 aa12.16□□□□□ -0.46
HLA-C-201ENST00000376228 LIMD2Q9BT23 127 aa12.16□□□□□ -0.46
HLA-C-201ENST00000376228 RPS29P62273 56 aaKnown RBP12.16□□□□□ -0.46
HLA-C-201ENST00000376228 C4orf48Q5BLP8 95 aa12.16□□□□□ -0.46
HLA-C-201ENST00000376228 SPAG11AQ6PDA7 123 aa12.16□□□□□ -0.46
HLA-C-201ENST00000376228 SMIM20Q8N5G0 67 aa12.16□□□□□ -0.46
HLA-C-201ENST00000376228 HCG22E2RYF7 251 aa12.13□□□□□ -0.47
HLA-C-201ENST00000376228 SERP2Q8N6R1 65 aa12.13□□□□□ -0.47
HLA-C-201ENST00000376228 LINC00304Q8N9R0 145 aa12.11□□□□□ -0.47
HLA-C-201ENST00000376228 COX7CP15954 63 aa12.1□□□□□ -0.47
HLA-C-201ENST00000376228 TRAV7A0A075B6U4 112 aa12.09□□□□□ -0.47
HLA-C-201ENST00000376228 A0A1B0GVX0 72 aa12.08□□□□□ -0.48
HLA-C-201ENST00000376228 UQCRQO14949 82 aa12.07□□□□□ -0.48
HLA-C-201ENST00000376228 C1orf195Q5TG92 126 aa12.07□□□□□ -0.48
HLA-C-201ENST00000376228 UBR4Q5T4S7 5183 aa12.04□□□□□ -0.48
HLA-C-201ENST00000376228 MMP24-AS1A0A0U1RRL7 71 aa12.04□□□□□ -0.48
HLA-C-201ENST00000376228 OCR1Q9BZK8 76 aa12.04□□□□□ -0.48
HLA-C-201ENST00000376228 CASC2Q6XLA1 102 aa12.02□□□□□ -0.48
HLA-C-201ENST00000376228 C8orf17Q9NRJ1 99 aa12.01□□□□□ -0.49
HLA-C-201ENST00000376228 CCDC179H3BU77 68 aa12.01□□□□□ -0.49
HLA-C-201ENST00000376228 WFDC13Q8IUB5 93 aa12□□□□□ -0.49
HLA-C-201ENST00000376228 LRP2P98164 4655 aa12□□□□□ -0.49
HLA-C-201ENST00000376228 IGHV6-1A0A0B4J1U7 121 aa11.98□□□□□ -0.49
HLA-C-201ENST00000376228 hDV103S1A0JD37 113 aa11.96□□□□□ -0.49
HLA-C-201ENST00000376228 C8orf87E5RJ46 101 aa11.96□□□□□ -0.49
HLA-C-201ENST00000376228 TMEM254Q8TBM7 123 aa11.92□□□□□ -0.5
HLA-C-201ENST00000376228 LPAP08519 4548 aa11.9□□□□□ -0.5
HLA-C-201ENST00000376228 NOTCH2NLQ7Z3S9 236 aa11.89□□□□□ -0.51
HLA-C-201ENST00000376228 MRPL34Q9BQ48 92 aaKnown RBP11.88□□□□□ -0.51
HLA-C-201ENST00000376228 LINC00313P59037 77 aa11.86□□□□□ -0.51
HLA-C-201ENST00000376228 C5orf47Q569G3 176 aa11.84□□□□□ -0.51
HLA-C-201ENST00000376228 TP53AIP1Q9HCN2 124 aa11.84□□□□□ -0.51
HLA-C-201ENST00000376228 KLKP1Q107X0 134 aa11.83□□□□□ -0.52
HLA-C-201ENST00000376228 C20orf197Q8N268 126 aa11.83□□□□□ -0.52
HLA-C-201ENST00000376228 PRR4Q16378 134 aa11.81□□□□□ -0.52
HLA-C-201ENST00000376228 A0A0U1RQV1 116 aa11.77□□□□□ -0.52
HLA-C-201ENST00000376228 KRTAP16-1A8MUX0 517 aa11.76□□□□□ -0.53
HLA-C-201ENST00000376228 Q8N9P0 234 aaPredicted RBP11.76□□□□□ -0.53
HLA-C-201ENST00000376228 RETNLBQ9BQ08 111 aa11.74□□□□□ -0.53
HLA-C-201ENST00000376228 H3BPC8 53 aa11.73□□□□□ -0.53
HLA-C-201ENST00000376228 CYSTM1Q9H1C7 97 aa11.73□□□□□ -0.53
HLA-C-201ENST00000376228 RNF213Q63HN8 5207 aa11.72□□□□□ -0.53
HLA-C-201ENST00000376228 MP68P56378 58 aa11.71□□□□□ -0.53
HLA-C-201ENST00000376228 NDUFC1O43677 76 aa11.7□□□□□ -0.54
HLA-C-201ENST00000376228 NDUFS5O43920 106 aa11.7□□□□□ -0.54
HLA-C-201ENST00000376228 ZCCHC13Q8WW36 166 aaKnown RBP11.7□□□□□ -0.54
HLA-C-201ENST00000376228 SNURFQ9Y675 71 aa11.7□□□□□ -0.54
HLA-C-201ENST00000376228 TRAV22A0A0B4J277 110 aa11.7□□□□□ -0.54
HLA-C-201ENST00000376228 H0Y9P7 68 aa11.68□□□□□ -0.54
HLA-C-201ENST00000376228 FP248Q71RG6 208 aaPredicted RBP11.66□□□□□ -0.54
HLA-C-201ENST00000376228 H7BZZ5 65 aa11.65□□□□□ -0.55
HLA-C-201ENST00000376228 TMEM258P61165 79 aa11.61□□□□□ -0.55
HLA-C-201ENST00000376228 KRTAP13-3Q3SY46 172 aa11.61□□□□□ -0.55
HLA-C-201ENST00000376228 LINC00208Q96KT6 92 aa11.61□□□□□ -0.55
HLA-C-201ENST00000376228 C1orf64Q8NEQ6 169 aa11.57□□□□□ -0.56
HLA-C-201ENST00000376228 Q5W150 140 aa11.56□□□□□ -0.56
HLA-C-201ENST00000376228 IGLV7-46A0A075B6I9 117 aa11.54□□□□□ -0.56
HLA-C-201ENST00000376228 C20orf166-AS1Q96NR2 134 aa11.54□□□□□ -0.56
HLA-C-201ENST00000376228 A8MUU9 505 aa11.52□□□□□ -0.57
HLA-C-201ENST00000376228 C9orf92A6NGG3 77 aa11.5□□□□□ -0.57
HLA-C-201ENST00000376228 LOC101927531A0A1B0GV80 90 aa11.5□□□□□ -0.57
HLA-C-201ENST00000376228 TPRXLQ17RH7 258 aa11.47□□□□□ -0.57
HLA-C-201ENST00000376228 ATP5EP56381 51 aaPredicted RBP11.46□□□□□ -0.57
HLA-C-201ENST00000376228 FAM236DA0A1B0GTK5 79 aa11.45□□□□□ -0.58
HLA-C-201ENST00000376228 FAM236CP0DP71 79 aa11.45□□□□□ -0.58
HLA-C-201ENST00000376228 MUC2Q02817 5179 aa11.42□□□□□ -0.58
HLA-C-201ENST00000376228 Q75L30 129 aa11.42□□□□□ -0.58
HLA-C-201ENST00000376228 SPANXA2-OT1Q8N9U9 137 aa11.4□□□□□ -0.58
HLA-C-201ENST00000376228 CYP4F30PQ9H0H9 118 aa11.4□□□□□ -0.58
HLA-C-201ENST00000376228 IGKV2-30P06310 120 aa11.39□□□□□ -0.59
HLA-C-201ENST00000376228 MUC17Q685J3 4493 aa11.32□□□□□ -0.6
HLA-C-201ENST00000376228 RPS28P62857 69 aaKnown RBP11.31□□□□□ -0.6
HLA-C-201ENST00000376228 PCOTHQ58A44 107 aa11.31□□□□□ -0.6
HLA-C-201ENST00000376228 XP32Q5T750 250 aa11.3□□□□□ -0.6
HLA-C-201ENST00000376228 RPL37P61927 97 aaKnown RBP11.28□□□□□ -0.6
HLA-C-201ENST00000376228 C7orf65Q6ZTY9 151 aa11.25□□□□□ -0.61
HLA-C-201ENST00000376228 SERP1Q9Y6X1 66 aa11.25□□□□□ -0.61
HLA-C-201ENST00000376228 IGKV2D-30A0A075B6S6 120 aa11.24□□□□□ -0.61
HLA-C-201ENST00000376228 ATP11AUNQ6ZP68 121 aa11.2□□□□□ -0.62
HLA-C-201ENST00000376228 HRES1P13985 223 aa11.19□□□□□ -0.62
HLA-C-201ENST00000376228 SPINK7P58062 85 aa11.11□□□□□ -0.63
HLA-C-201ENST00000376228 FAT4Q6V0I7 4981 aa11.1□□□□□ -0.63
HLA-C-201ENST00000376228 SEC61BP60468 96 aaKnown RBP11.09□□□□□ -0.63
HLA-C-201ENST00000376228 DMAC1Q96GE9 116 aa11.08□□□□□ -0.64
HLA-C-201ENST00000376228 KRTAP4-1Q9BYQ7 146 aa11.06□□□□□ -0.64
HLA-C-201ENST00000376228 ACYP2P14621 99 aa11.02□□□□□ -0.65
HLA-C-201ENST00000376228 COA5Q86WW8 74 aa10.99□□□□□ -0.65
HLA-C-201ENST00000376228 SMIM26A0A096LP01 95 aa10.98□□□□□ -0.65
HLA-C-201ENST00000376228 A8MUN3 132 aa10.98□□□□□ -0.65
HLA-C-201ENST00000376228 C4orf26Q17RF5 130 aa10.94□□□□□ -0.66
HLA-C-201ENST00000376228 LCE2AQ5TA79 106 aaPredicted RBP10.9□□□□□ -0.66
HLA-C-201ENST00000376228 COX6B2Q6YFQ2 88 aa10.88□□□□□ -0.67
HLA-C-201ENST00000376228 KRTAP3-1Q9BYR8 98 aa10.85□□□□□ -0.67
HLA-C-201ENST00000376228 CHKB-CPT1BH3BT56 60 aa10.78□□□□□ -0.68
HLA-C-201ENST00000376228 MPLKIPQ8TAP9 179 aa10.78□□□□□ -0.68
HLA-C-201ENST00000376228 Q1T7F1 81 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms