RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 LAMA1P25391 3075 aa5.55□□□□□ -1.52
SPEN-201ENST00000375759 DNAH14Q0VDD8 3507 aa5.54□□□□□ -1.52
SPEN-201ENST00000375759 CRYBG3Q68DQ2 2970 aa5.52□□□□□ -1.53
SPEN-201ENST00000375759 NIPBLQ6KC79 2804 aaeCLIP5.52□□□□□ -1.531e-6■■■□□ 18.8
SPEN-201ENST00000375759 KRTAP11-1Q8IUC1 163 aa5.51□□□□□ -1.53
SPEN-201ENST00000375759 TNP1P09430 55 aa5.51□□□□□ -1.53
SPEN-201ENST00000375759 ZZEF1O43149 2961 aa5.5□□□□□ -1.53
SPEN-201ENST00000375759 BOD1L1Q8NFC6 3051 aa5.49□□□□□ -1.53
SPEN-201ENST00000375759 KRTAP13-1Q8IUC0 172 aa5.48□□□□□ -1.53
SPEN-201ENST00000375759 COL6A3P12111 3177 aa5.47□□□□□ -1.53
SPEN-201ENST00000375759 ADGRG4Q8IZF6 3080 aa5.47□□□□□ -1.53
SPEN-201ENST00000375759 NF1P21359 2839 aa5.47□□□□□ -1.53
SPEN-201ENST00000375759 C10orf95Q9H7T3 257 aa5.46□□□□□ -1.53
SPEN-201ENST00000375759 Q6ZRN7 208 aaPredicted RBP5.46□□□□□ -1.54
SPEN-201ENST00000375759 PP632Q6XCG6 107 aa5.46□□□□□ -1.54
SPEN-201ENST00000375759 KRTAP7-1Q8IUC3 87 aa5.46□□□□□ -1.54
SPEN-201ENST00000375759 TENM1Q9UKZ4 2725 aa5.46□□□□□ -1.54
SPEN-201ENST00000375759 CDH23Q9H251 3354 aa5.45□□□□□ -1.54
SPEN-201ENST00000375759 KRTAP13-2Q52LG2 175 aa5.45□□□□□ -1.54
SPEN-201ENST00000375759 VCANP13611 3396 aa5.43□□□□□ -1.54
SPEN-201ENST00000375759 DCHS2Q6V1P9 2916 aa5.42□□□□□ -1.54
SPEN-201ENST00000375759 USP34Q70CQ2 3546 aa5.42□□□□□ -1.54
SPEN-201ENST00000375759 ATMQ13315 3056 aa5.41□□□□□ -1.54
SPEN-201ENST00000375759 TGP01266 2768 aa5.37□□□□□ -1.55
SPEN-201ENST00000375759 TNRC18O15417 2968 aaPredicted RBP5.37□□□□□ -1.55
SPEN-201ENST00000375759 TENM3Q9P273 2699 aa5.37□□□□□ -1.55
SPEN-201ENST00000375759 ZANQ9Y493 2812 aa5.37□□□□□ -1.55
SPEN-201ENST00000375759 CFAP47Q6ZTR5 3102 aa5.36□□□□□ -1.55
SPEN-201ENST00000375759 DMXL1Q9Y485 3027 aa5.36□□□□□ -1.55
SPEN-201ENST00000375759 FBN2P35556 2912 aa5.32□□□□□ -1.56
SPEN-201ENST00000375759 PDZD2O15018 2839 aa5.31□□□□□ -1.56
SPEN-201ENST00000375759 H0YAA0 97 aa5.3□□□□□ -1.56
SPEN-201ENST00000375759 TENM4Q6N022 2769 aa5.3□□□□□ -1.56
SPEN-201ENST00000375759 P0C880 135 aa5.29□□□□□ -1.56
SPEN-201ENST00000375759 SPEGQ15772 3267 aa5.27□□□□□ -1.57
SPEN-201ENST00000375759 CELSR1Q9NYQ6 3014 aa5.25□□□□□ -1.57
SPEN-201ENST00000375759 HRNRQ86YZ3 2850 aaPredicted RBP5.22□□□□□ -1.57
SPEN-201ENST00000375759 KRTAP10-8P60410 259 aa5.22□□□□□ -1.57
SPEN-201ENST00000375759 SZT2Q5T011 3432 aa5.22□□□□□ -1.57
SPEN-201ENST00000375759 XP32Q5T750 250 aa5.18□□□□□ -1.58
SPEN-201ENST00000375759 SPTBN5Q9NRC6 3674 aaKnown RBP5.17□□□□□ -1.58
SPEN-201ENST00000375759 EYSQ5T1H1 3165 aa5.16□□□□□ -1.58
SPEN-201ENST00000375759 MXRA5Q9NR99 2828 aa5.15□□□□□ -1.59
SPEN-201ENST00000375759 KRTAP1-4P0C5Y4 121 aa5.14□□□□□ -1.59
SPEN-201ENST00000375759 PRO2289Q9P1D8 64 aa5.12□□□□□ -1.59
SPEN-201ENST00000375759 VWFP04275 2813 aa5.12□□□□□ -1.59
SPEN-201ENST00000375759 PKD1L1Q8TDX9 2849 aa5.12□□□□□ -1.59
SPEN-201ENST00000375759 TPRXLQ17RH7 258 aa5.1□□□□□ -1.59
SPEN-201ENST00000375759 MYO15AQ9UKN7 3530 aa5.07□□□□□ -1.6
SPEN-201ENST00000375759 WDFY3Q8IZQ1 3526 aa5.04□□□□□ -1.6
SPEN-201ENST00000375759 A0A1B0GVY2 172 aa5.04□□□□□ -1.6
SPEN-201ENST00000375759 LOC400499M0QZD8 3231 aa5.03□□□□□ -1.6
SPEN-201ENST00000375759 KRTAP21-3Q3LHN1 58 aa5.02□□□□□ -1.61
SPEN-201ENST00000375759 SRRM2Q9UQ35 2752 aaKnown RBP5.01□□□□□ -1.61
SPEN-201ENST00000375759 KRTAP10-10P60014 251 aa5.01□□□□□ -1.61
SPEN-201ENST00000375759 KRTAP13-3Q3SY46 172 aa4.98□□□□□ -1.61
SPEN-201ENST00000375759 TENM2Q9NT68 2774 aa4.94□□□□□ -1.62
SPEN-201ENST00000375759 NBPF19A0A087WUL8 3843 aa4.94□□□□□ -1.62
SPEN-201ENST00000375759 KRTAP12-2P59991 146 aa4.93□□□□□ -1.62
SPEN-201ENST00000375759 KRTAP13-4Q3LI77 160 aa4.92□□□□□ -1.62
SPEN-201ENST00000375759 ZFHX4Q86UP3 3567 aa4.9□□□□□ -1.62
SPEN-201ENST00000375759 COL7A1Q02388 2944 aa4.9□□□□□ -1.63
SPEN-201ENST00000375759 LAMA5O15230 3695 aa4.88□□□□□ -1.63
SPEN-201ENST00000375759 ASPMQ8IZT6 3477 aa4.86□□□□□ -1.63
SPEN-201ENST00000375759 MEGF8Q7Z7M0 2845 aa4.85□□□□□ -1.63
SPEN-201ENST00000375759 KRTAP12-1P59990 96 aa4.84□□□□□ -1.63
SPEN-201ENST00000375759 CSMD1Q96PZ7 3565 aa4.8□□□□□ -1.64
SPEN-201ENST00000375759 DCHS1Q96JQ0 3298 aa4.8□□□□□ -1.64
SPEN-201ENST00000375759 RELNP78509 3460 aa4.79□□□□□ -1.64
SPEN-201ENST00000375759 FBN1P35555 2871 aaKnown RBP4.79□□□□□ -1.64
SPEN-201ENST00000375759 FBN3Q75N90 2809 aa4.78□□□□□ -1.64
SPEN-201ENST00000375759 ZFHX3Q15911 3703 aa4.78□□□□□ -1.64
SPEN-201ENST00000375759 SMG1Q96Q15 3661 aaKnown RBP4.77□□□□□ -1.65
SPEN-201ENST00000375759 SPENQ96T58 3664 aaKnown RBP4.72□□□□□ -1.65
SPEN-201ENST00000375759 KRTAP15-1Q3LI76 137 aa4.71□□□□□ -1.66
SPEN-201ENST00000375759 INE1O15225 51 aa4.7□□□□□ -1.66
SPEN-201ENST00000375759 DMDP11532 3685 aa4.69□□□□□ -1.66
SPEN-201ENST00000375759 KRTAP3-1Q9BYR8 98 aa4.67□□□□□ -1.66
SPEN-201ENST00000375759 OTOGQ6ZRI0 2925 aa4.62□□□□□ -1.67
SPEN-201ENST00000375759 KRTAP10-6P60371 365 aaPredicted RBP4.62□□□□□ -1.67
SPEN-201ENST00000375759 TRRAPQ9Y4A5 3859 aa4.61□□□□□ -1.67
SPEN-201ENST00000375759 SVEP1Q4LDE5 3571 aa4.58□□□□□ -1.68
SPEN-201ENST00000375759 CUBNO60494 3623 aa4.57□□□□□ -1.68
SPEN-201ENST00000375759 VPS13CQ709C8 3753 aa4.55□□□□□ -1.68
SPEN-201ENST00000375759 MUC3AQ02505 3323 aa4.47□□□□□ -1.69
SPEN-201ENST00000375759 KRTAP10-12P60413 245 aa4.44□□□□□ -1.7
SPEN-201ENST00000375759 KRTAP23-1A1A580 65 aa4.42□□□□□ -1.7
SPEN-201ENST00000375759 KRTAP3-2Q9BYR7 98 aa4.41□□□□□ -1.7
SPEN-201ENST00000375759 AKAP9Q99996 3911 aa4.39□□□□□ -1.71
SPEN-201ENST00000375759 KRTAP3-3Q9BYR6 98 aa4.38□□□□□ -1.71
SPEN-201ENST00000375759 CSMD3Q7Z407 3707 aa4.38□□□□□ -1.71
SPEN-201ENST00000375759 BSNQ9UPA5 3926 aa4.34□□□□□ -1.72
SPEN-201ENST00000375759 KRTAP12-3P60328 96 aa4.33□□□□□ -1.72
SPEN-201ENST00000375759 CSMD2Q7Z408 3487 aa4.3□□□□□ -1.72
SPEN-201ENST00000375759 CRCT1Q9UGL9 99 aa4.28□□□□□ -1.72
SPEN-201ENST00000375759 ANK3Q12955 4377 aaKnown RBP4.26□□□□□ -1.73
SPEN-201ENST00000375759 MT1HL1P0DM35 61 aa4.24□□□□□ -1.73
SPEN-201ENST00000375759 ALMS1Q8TCU4 4167 aa4.23□□□□□ -1.73
SPEN-201ENST00000375759 LCE3AQ5TA76 89 aa4.21□□□□□ -1.74
SPEN-201ENST00000375759 HUWE1Q7Z6Z7 4374 aaKnown RBP4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 444 ms