RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 CDH23Q9H251 3354 aa11.49□□□□□ -0.57
TGFBR1-202ENST00000374994 LAMA1P25391 3075 aa11.49□□□□□ -0.57
TGFBR1-202ENST00000374994 HIVEP1P15822 2718 aa11.47□□□□□ -0.57
TGFBR1-202ENST00000374994 NDUFAF8A1L188 74 aa11.45□□□□□ -0.58
TGFBR1-202ENST00000374994 ASH1LQ9NR48 2969 aaKnown RBP11.45□□□□□ -0.58
TGFBR1-202ENST00000374994 KRTAP1-4P0C5Y4 121 aa11.45□□□□□ -0.58
TGFBR1-202ENST00000374994 DMXL2Q8TDJ6 3036 aa11.4□□□□□ -0.58
TGFBR1-202ENST00000374994 CELSR3Q9NYQ7 3312 aa11.39□□□□□ -0.59
TGFBR1-202ENST00000374994 VCANP13611 3396 aa11.38□□□□□ -0.59
TGFBR1-202ENST00000374994 FRYLO94915 3013 aa11.36□□□□□ -0.59
TGFBR1-202ENST00000374994 BOD1L1Q8NFC6 3051 aa11.35□□□□□ -0.59
TGFBR1-202ENST00000374994 H0YAA0 97 aa11.33□□□□□ -0.6
TGFBR1-202ENST00000374994 ZANQ9Y493 2812 aa11.32□□□□□ -0.6
TGFBR1-202ENST00000374994 ZZEF1O43149 2961 aa11.32□□□□□ -0.6
TGFBR1-202ENST00000374994 CELSR2Q9HCU4 2923 aa11.3□□□□□ -0.6
TGFBR1-202ENST00000374994 HRNRQ86YZ3 2850 aaPredicted RBP11.29□□□□□ -0.6
TGFBR1-202ENST00000374994 SZT2Q5T011 3432 aa11.27□□□□□ -0.61
TGFBR1-202ENST00000374994 KRTAP13-3Q3SY46 172 aa11.22□□□□□ -0.61
TGFBR1-202ENST00000374994 PP632Q6XCG6 107 aa11.22□□□□□ -0.61
TGFBR1-202ENST00000374994 TNP1P09430 55 aa11.2□□□□□ -0.62
TGFBR1-202ENST00000374994 DCHS2Q6V1P9 2916 aa11.18□□□□□ -0.62
TGFBR1-202ENST00000374994 DNAH14Q0VDD8 3507 aa11.18□□□□□ -0.62
TGFBR1-202ENST00000374994 KRTAP21-3Q3LHN1 58 aa11.15□□□□□ -0.62
TGFBR1-202ENST00000374994 XP32Q5T750 250 aa11.15□□□□□ -0.62
TGFBR1-202ENST00000374994 TENM4Q6N022 2769 aa11.14□□□□□ -0.63
TGFBR1-202ENST00000374994 EYSQ5T1H1 3165 aa11.13□□□□□ -0.63
TGFBR1-202ENST00000374994 COL6A3P12111 3177 aa11.08□□□□□ -0.64
TGFBR1-202ENST00000374994 C10orf95Q9H7T3 257 aa11.07□□□□□ -0.64
TGFBR1-202ENST00000374994 P0C880 135 aa11.04□□□□□ -0.64
TGFBR1-202ENST00000374994 TNRC18O15417 2968 aaPredicted RBP10.98□□□□□ -0.65
TGFBR1-202ENST00000374994 FBN2P35556 2912 aa10.97□□□□□ -0.65
TGFBR1-202ENST00000374994 NF1P21359 2839 aa10.96□□□□□ -0.65
TGFBR1-202ENST00000374994 TPRXLQ17RH7 258 aa10.91□□□□□ -0.66
TGFBR1-202ENST00000374994 CFAP47Q6ZTR5 3102 aa10.85□□□□□ -0.67
TGFBR1-202ENST00000374994 REV3LO60673 3130 aa10.84□□□□□ -0.67
TGFBR1-202ENST00000374994 MXRA5Q9NR99 2828 aa10.81□□□□□ -0.68
TGFBR1-202ENST00000374994 TENM3Q9P273 2699 aa10.8□□□□□ -0.68
TGFBR1-202ENST00000374994 TGP01266 2768 aa10.77□□□□□ -0.69
TGFBR1-202ENST00000374994 DMXL1Q9Y485 3027 aa10.73□□□□□ -0.69
TGFBR1-202ENST00000374994 SPTBN5Q9NRC6 3674 aaKnown RBP10.68□□□□□ -0.7
TGFBR1-202ENST00000374994 CRYBG3Q68DQ2 2970 aa10.68□□□□□ -0.7
TGFBR1-202ENST00000374994 USP34Q70CQ2 3546 aa10.68□□□□□ -0.7
TGFBR1-202ENST00000374994 KRTAP10-8P60410 259 aa10.65□□□□□ -0.7
TGFBR1-202ENST00000374994 LOC400499M0QZD8 3231 aa10.6□□□□□ -0.71
TGFBR1-202ENST00000374994 TENM1Q9UKZ4 2725 aa10.58□□□□□ -0.72
TGFBR1-202ENST00000374994 SPEGQ15772 3267 aa10.54□□□□□ -0.72
TGFBR1-202ENST00000374994 CELSR1Q9NYQ6 3014 aa10.54□□□□□ -0.72
TGFBR1-202ENST00000374994 KRTAP12-2P59991 146 aa10.52□□□□□ -0.73
TGFBR1-202ENST00000374994 A0A1B0GVY2 172 aa10.51□□□□□ -0.73
TGFBR1-202ENST00000374994 KRTAP3-1Q9BYR8 98 aa10.5□□□□□ -0.73
TGFBR1-202ENST00000374994 TENM2Q9NT68 2774 aa10.44□□□□□ -0.74
TGFBR1-202ENST00000374994 KRTAP12-1P59990 96 aa10.42□□□□□ -0.74
TGFBR1-202ENST00000374994 PDZD2O15018 2839 aa10.42□□□□□ -0.74
TGFBR1-202ENST00000374994 KRTAP13-4Q3LI77 160 aa10.37□□□□□ -0.75
TGFBR1-202ENST00000374994 KRTAP10-10P60014 251 aa10.28□□□□□ -0.76
TGFBR1-202ENST00000374994 PRO2289Q9P1D8 64 aa10.27□□□□□ -0.77
TGFBR1-202ENST00000374994 KRTAP10-6P60371 365 aaPredicted RBP10.26□□□□□ -0.77
TGFBR1-202ENST00000374994 MYO15AQ9UKN7 3530 aa10.18□□□□□ -0.78
TGFBR1-202ENST00000374994 VWFP04275 2813 aa10.12□□□□□ -0.79
TGFBR1-202ENST00000374994 PKD1L1Q8TDX9 2849 aa10.08□□□□□ -0.8
TGFBR1-202ENST00000374994 RELNP78509 3460 aa10.06□□□□□ -0.8
TGFBR1-202ENST00000374994 WDFY3Q8IZQ1 3526 aa10.04□□□□□ -0.8
TGFBR1-202ENST00000374994 DCHS1Q96JQ0 3298 aa9.99□□□□□ -0.81
TGFBR1-202ENST00000374994 OTOGQ6ZRI0 2925 aa9.97□□□□□ -0.81
TGFBR1-202ENST00000374994 KRTAP3-2Q9BYR7 98 aa9.92□□□□□ -0.82
TGFBR1-202ENST00000374994 FBN1P35555 2871 aaKnown RBP9.92□□□□□ -0.82
TGFBR1-202ENST00000374994 KRTAP15-1Q3LI76 137 aa9.88□□□□□ -0.83
TGFBR1-202ENST00000374994 FBN3Q75N90 2809 aa9.86□□□□□ -0.83
TGFBR1-202ENST00000374994 KRTAP3-3Q9BYR6 98 aa9.86□□□□□ -0.83
TGFBR1-202ENST00000374994 ANK3Q12955 4377 aaKnown RBP9.81□□□□□ -0.84
TGFBR1-202ENST00000374994 ZFHX4Q86UP3 3567 aa9.76□□□□□ -0.85
TGFBR1-202ENST00000374994 MEGF8Q7Z7M0 2845 aa9.75□□□□□ -0.85
TGFBR1-202ENST00000374994 SRRM2Q9UQ35 2752 aaKnown RBP9.71□□□□□ -0.86
TGFBR1-202ENST00000374994 MT1HL1P0DM35 61 aa9.66□□□□□ -0.86
TGFBR1-202ENST00000374994 CSMD1Q96PZ7 3565 aa9.65□□□□□ -0.86
TGFBR1-202ENST00000374994 KRTAP10-4P60372 401 aaPredicted RBP9.63□□□□□ -0.87
TGFBR1-202ENST00000374994 LAMA5O15230 3695 aa9.61□□□□□ -0.87
TGFBR1-202ENST00000374994 SMG1Q96Q15 3661 aaKnown RBP9.57□□□□□ -0.88
TGFBR1-202ENST00000374994 ASPMQ8IZT6 3477 aa9.57□□□□□ -0.88
TGFBR1-202ENST00000374994 INE1O15225 51 aa9.54□□□□□ -0.88
TGFBR1-202ENST00000374994 KRTAP23-1A1A580 65 aa9.5□□□□□ -0.89
TGFBR1-202ENST00000374994 NBPF19A0A087WUL8 3843 aa9.41□□□□□ -0.9
TGFBR1-202ENST00000374994 COL7A1Q02388 2944 aa9.36□□□□□ -0.91
TGFBR1-202ENST00000374994 TRRAPQ9Y4A5 3859 aa9.28□□□□□ -0.92
TGFBR1-202ENST00000374994 HUWE1Q7Z6Z7 4374 aaKnown RBP9.28□□□□□ -0.92
TGFBR1-202ENST00000374994 DMDP11532 3685 aa9.27□□□□□ -0.92
TGFBR1-202ENST00000374994 SVEP1Q4LDE5 3571 aa9.27□□□□□ -0.93
TGFBR1-202ENST00000374994 KRTAP10-12P60413 245 aa9.23□□□□□ -0.93
TGFBR1-202ENST00000374994 ZFHX3Q15911 3703 aa9.19□□□□□ -0.94
TGFBR1-202ENST00000374994 MUC3AQ02505 3323 aa9.12□□□□□ -0.95
TGFBR1-202ENST00000374994 CUBNO60494 3623 aa9.09□□□□□ -0.95
TGFBR1-202ENST00000374994 KRTAP12-3P60328 96 aa9.09□□□□□ -0.95
TGFBR1-202ENST00000374994 SPENQ96T58 3664 aaKnown RBP9.07□□□□□ -0.96
TGFBR1-202ENST00000374994 CSMD2Q7Z408 3487 aa9.06□□□□□ -0.96
TGFBR1-202ENST00000374994 LORP23490 312 aaPredicted RBP9.04□□□□□ -0.96
TGFBR1-202ENST00000374994 ALMS1Q8TCU4 4167 aa8.99□□□□□ -0.97
TGFBR1-202ENST00000374994 LCE3AQ5TA76 89 aa8.98□□□□□ -0.97
TGFBR1-202ENST00000374994 BSNQ9UPA5 3926 aa8.94□□□□□ -0.98
TGFBR1-202ENST00000374994 KRTAP4-5Q9BYR2 181 aa8.92□□□□□ -0.98
TGFBR1-202ENST00000374994 DNAH5Q8TE73 4624 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms