RNA–Protein interactions for RNA: ENST00000374723.5

SLC44A1-202, Transcript of solute carrier family 44 member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SLC44A1, Length 9,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1-202ENST00000374723 ASH1LQ9NR48 2969 aaKnown RBP7.1□□□□□ -1.27
SLC44A1-202ENST00000374723 ITPR1Q14643 2758 aa7.08□□□□□ -1.28
SLC44A1-202ENST00000374723 PP632Q6XCG6 107 aa7.08□□□□□ -1.28
SLC44A1-202ENST00000374723 DNAH14Q0VDD8 3507 aa7.06□□□□□ -1.28
SLC44A1-202ENST00000374723 HIVEP1P15822 2718 aa7.06□□□□□ -1.28
SLC44A1-202ENST00000374723 FRYLO94915 3013 aa7.05□□□□□ -1.28
SLC44A1-202ENST00000374723 HTTP42858 3142 aa7.05□□□□□ -1.28
SLC44A1-202ENST00000374723 PRO2289Q9P1D8 64 aa7.04□□□□□ -1.28
SLC44A1-202ENST00000374723 CDH23Q9H251 3354 aa7.03□□□□□ -1.28
SLC44A1-202ENST00000374723 KRTAP10-10P60014 251 aa7.03□□□□□ -1.28
SLC44A1-202ENST00000374723 KRTAP21-3Q3LHN1 58 aa7.02□□□□□ -1.29
SLC44A1-202ENST00000374723 XP32Q5T750 250 aa7□□□□□ -1.29
SLC44A1-202ENST00000374723 COL6A3P12111 3177 aa6.98□□□□□ -1.29
SLC44A1-202ENST00000374723 COL12A1Q99715 3063 aa6.97□□□□□ -1.29
SLC44A1-202ENST00000374723 CFAP47Q6ZTR5 3102 aa6.97□□□□□ -1.29
SLC44A1-202ENST00000374723 LAMA1P25391 3075 aa6.96□□□□□ -1.29
SLC44A1-202ENST00000374723 TACC2O95359 2948 aa6.94□□□□□ -1.3
SLC44A1-202ENST00000374723 VCANP13611 3396 aa6.93□□□□□ -1.3
SLC44A1-202ENST00000374723 TENM1Q9UKZ4 2725 aa6.93□□□□□ -1.3
SLC44A1-202ENST00000374723 USP34Q70CQ2 3546 aa6.93□□□□□ -1.3
SLC44A1-202ENST00000374723 SPEGQ15772 3267 aa6.93□□□□□ -1.3
SLC44A1-202ENST00000374723 FLNCQ14315 2725 aa6.92□□□□□ -1.3
SLC44A1-202ENST00000374723 P0C880 135 aa6.9□□□□□ -1.3
SLC44A1-202ENST00000374723 CELSR2Q9HCU4 2923 aa6.9□□□□□ -1.31
SLC44A1-202ENST00000374723 BOD1L1Q8NFC6 3051 aa6.89□□□□□ -1.31
SLC44A1-202ENST00000374723 TPRXLQ17RH7 258 aa6.89□□□□□ -1.31
SLC44A1-202ENST00000374723 TENM4Q6N022 2769 aa6.81□□□□□ -1.32
SLC44A1-202ENST00000374723 H0YAA0 97 aa6.8□□□□□ -1.32
SLC44A1-202ENST00000374723 KRTAP1-4P0C5Y4 121 aa6.8□□□□□ -1.32
SLC44A1-202ENST00000374723 SZT2Q5T011 3432 aa6.79□□□□□ -1.32
SLC44A1-202ENST00000374723 ATMQ13315 3056 aa6.79□□□□□ -1.32
SLC44A1-202ENST00000374723 ZZEF1O43149 2961 aa6.78□□□□□ -1.32
SLC44A1-202ENST00000374723 NF1P21359 2839 aa6.77□□□□□ -1.33
SLC44A1-202ENST00000374723 ADGRG4Q8IZF6 3080 aa6.76□□□□□ -1.33
SLC44A1-202ENST00000374723 DCHS2Q6V1P9 2916 aa6.74□□□□□ -1.33
SLC44A1-202ENST00000374723 NBEAQ8NFP9 2946 aa6.72□□□□□ -1.33
SLC44A1-202ENST00000374723 TENM3Q9P273 2699 aa6.71□□□□□ -1.33
SLC44A1-202ENST00000374723 TNRC18O15417 2968 aaPredicted RBP6.7□□□□□ -1.34
SLC44A1-202ENST00000374723 KRTAP13-3Q3SY46 172 aa6.68□□□□□ -1.34
SLC44A1-202ENST00000374723 NIPBLQ6KC79 2804 aaeCLIP6.66□□□□□ -1.34
SLC44A1-202ENST00000374723 CELSR1Q9NYQ6 3014 aa6.65□□□□□ -1.35
SLC44A1-202ENST00000374723 TGP01266 2768 aa6.65□□□□□ -1.35
SLC44A1-202ENST00000374723 SPTBN5Q9NRC6 3674 aaKnown RBP6.59□□□□□ -1.36
SLC44A1-202ENST00000374723 EYSQ5T1H1 3165 aa6.58□□□□□ -1.36
SLC44A1-202ENST00000374723 DMXL1Q9Y485 3027 aa6.56□□□□□ -1.36
SLC44A1-202ENST00000374723 NBPF19A0A087WUL8 3843 aa6.55□□□□□ -1.36
SLC44A1-202ENST00000374723 PDZD2O15018 2839 aa6.54□□□□□ -1.36
SLC44A1-202ENST00000374723 FBN2P35556 2912 aa6.52□□□□□ -1.37
SLC44A1-202ENST00000374723 PKD1L1Q8TDX9 2849 aa6.5□□□□□ -1.37
SLC44A1-202ENST00000374723 ZANQ9Y493 2812 aa6.5□□□□□ -1.37
SLC44A1-202ENST00000374723 VWFP04275 2813 aa6.49□□□□□ -1.37
SLC44A1-202ENST00000374723 TENM2Q9NT68 2774 aa6.49□□□□□ -1.37
SLC44A1-202ENST00000374723 KRTAP12-2P59991 146 aa6.48□□□□□ -1.37
SLC44A1-202ENST00000374723 ZFHX4Q86UP3 3567 aa6.44□□□□□ -1.38
SLC44A1-202ENST00000374723 ASPMQ8IZT6 3477 aa6.41□□□□□ -1.38
SLC44A1-202ENST00000374723 KRTAP13-4Q3LI77 160 aa6.41□□□□□ -1.38
SLC44A1-202ENST00000374723 WDFY3Q8IZQ1 3526 aa6.4□□□□□ -1.39
SLC44A1-202ENST00000374723 LOC400499M0QZD8 3231 aa6.4□□□□□ -1.39
SLC44A1-202ENST00000374723 HRNRQ86YZ3 2850 aaPredicted RBP6.38□□□□□ -1.39
SLC44A1-202ENST00000374723 KRTAP15-1Q3LI76 137 aa6.37□□□□□ -1.39
SLC44A1-202ENST00000374723 MYO15AQ9UKN7 3530 aa6.34□□□□□ -1.39
SLC44A1-202ENST00000374723 MXRA5Q9NR99 2828 aa6.3□□□□□ -1.4
SLC44A1-202ENST00000374723 KRTAP12-1P59990 96 aa6.27□□□□□ -1.41
SLC44A1-202ENST00000374723 LAMA5O15230 3695 aa6.21□□□□□ -1.42
SLC44A1-202ENST00000374723 DCHS1Q96JQ0 3298 aa6.2□□□□□ -1.42
SLC44A1-202ENST00000374723 ZFHX3Q15911 3703 aa6.18□□□□□ -1.42
SLC44A1-202ENST00000374723 CRCT1Q9UGL9 99 aa6.16□□□□□ -1.42
SLC44A1-202ENST00000374723 CSMD1Q96PZ7 3565 aa6.1□□□□□ -1.43
SLC44A1-202ENST00000374723 RELNP78509 3460 aa6.1□□□□□ -1.43
SLC44A1-202ENST00000374723 COL7A1Q02388 2944 aa6.1□□□□□ -1.43
SLC44A1-202ENST00000374723 SRRM2Q9UQ35 2752 aaKnown RBP6.08□□□□□ -1.44
SLC44A1-202ENST00000374723 MEGF8Q7Z7M0 2845 aa6.02□□□□□ -1.44
SLC44A1-202ENST00000374723 KRTAP3-1Q9BYR8 98 aa6.02□□□□□ -1.45
SLC44A1-202ENST00000374723 KRTAP10-12P60413 245 aa5.99□□□□□ -1.45
SLC44A1-202ENST00000374723 SPENQ96T58 3664 aaKnown RBP5.98□□□□□ -1.45
SLC44A1-202ENST00000374723 SMG1Q96Q15 3661 aaKnown RBP5.97□□□□□ -1.45
SLC44A1-202ENST00000374723 DMDP11532 3685 aa5.96□□□□□ -1.46
SLC44A1-202ENST00000374723 FBN3Q75N90 2809 aa5.93□□□□□ -1.46
SLC44A1-202ENST00000374723 INE1O15225 51 aa5.92□□□□□ -1.46
SLC44A1-202ENST00000374723 KRTAP10-6P60371 365 aaPredicted RBP5.88□□□□□ -1.47
SLC44A1-202ENST00000374723 FBN1P35555 2871 aaKnown RBP5.88□□□□□ -1.47
SLC44A1-202ENST00000374723 TRRAPQ9Y4A5 3859 aa5.81□□□□□ -1.48
SLC44A1-202ENST00000374723 KRTAP12-3P60328 96 aa5.75□□□□□ -1.49
SLC44A1-202ENST00000374723 CUBNO60494 3623 aa5.74□□□□□ -1.49
SLC44A1-202ENST00000374723 MT1HL1P0DM35 61 aa5.73□□□□□ -1.49
SLC44A1-202ENST00000374723 SVEP1Q4LDE5 3571 aa5.72□□□□□ -1.49
SLC44A1-202ENST00000374723 MUC3AQ02505 3323 aa5.7□□□□□ -1.5
SLC44A1-202ENST00000374723 VPS13CQ709C8 3753 aa5.67□□□□□ -1.5
SLC44A1-202ENST00000374723 LCE3AQ5TA76 89 aa5.64□□□□□ -1.51
SLC44A1-202ENST00000374723 KRTAP10-5P60370 271 aa5.63□□□□□ -1.51
SLC44A1-202ENST00000374723 KRTAP3-3Q9BYR6 98 aa5.63□□□□□ -1.51
SLC44A1-202ENST00000374723 CSMD2Q7Z408 3487 aa5.62□□□□□ -1.51
SLC44A1-202ENST00000374723 KRTAP8-1Q8IUC2 63 aa5.62□□□□□ -1.51
SLC44A1-202ENST00000374723 KRTAP4-5Q9BYR2 181 aa5.62□□□□□ -1.51
SLC44A1-202ENST00000374723 KRTAP3-2Q9BYR7 98 aa5.61□□□□□ -1.51
SLC44A1-202ENST00000374723 OTOGQ6ZRI0 2925 aa5.6□□□□□ -1.51
SLC44A1-202ENST00000374723 CSMD3Q7Z407 3707 aa5.57□□□□□ -1.52
SLC44A1-202ENST00000374723 LORP23490 312 aaPredicted RBP5.54□□□□□ -1.52
SLC44A1-202ENST00000374723 ANK3Q12955 4377 aaKnown RBP5.52□□□□□ -1.53
SLC44A1-202ENST00000374723 KRTAP23-1A1A580 65 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms