RNA–Protein interactions for RNA: ENST00000372739.5

SPTAN1-203, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPTAN1, Length 7,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-203ENST00000372739 MUC3AQ02505 3323 aa5.29□□□□□ -1.56
SPTAN1-203ENST00000372739 STAB2Q8WWQ8 2551 aa5.29□□□□□ -1.56
SPTAN1-203ENST00000372739 NBEAL2Q6ZNJ1 2754 aa5.29□□□□□ -1.56
SPTAN1-203ENST00000372739 LOC400499M0QZD8 3231 aa5.28□□□□□ -1.56
SPTAN1-203ENST00000372739 KRTAP13-2Q52LG2 175 aa5.28□□□□□ -1.56
SPTAN1-203ENST00000372739 KRTAP13-1Q8IUC0 172 aa5.28□□□□□ -1.56
SPTAN1-203ENST00000372739 CFAP47Q6ZTR5 3102 aa5.28□□□□□ -1.56
SPTAN1-203ENST00000372739 A8MU10 97 aa5.26□□□□□ -1.57
SPTAN1-203ENST00000372739 KRTAP7-1Q8IUC3 87 aa5.26□□□□□ -1.57
SPTAN1-203ENST00000372739 NSD1Q96L73 2696 aaPredicted RBP5.25□□□□□ -1.57
SPTAN1-203ENST00000372739 KRTAP16-1A8MUX0 517 aa5.25□□□□□ -1.57
SPTAN1-203ENST00000372739 RELNP78509 3460 aa5.25□□□□□ -1.57
SPTAN1-203ENST00000372739 A6NN06 94 aa5.25□□□□□ -1.57
SPTAN1-203ENST00000372739 TNP1P09430 55 aa5.22□□□□□ -1.57
SPTAN1-203ENST00000372739 COL12A1Q99715 3063 aa5.21□□□□□ -1.58
SPTAN1-203ENST00000372739 DSPP15924 2871 aaKnown RBP5.2□□□□□ -1.58
SPTAN1-203ENST00000372739 APCP25054 2843 aa5.2□□□□□ -1.58
SPTAN1-203ENST00000372739 UBR5O95071 2799 aaPredicted RBP5.17□□□□□ -1.58
SPTAN1-203ENST00000372739 ADGRG4Q8IZF6 3080 aa5.15□□□□□ -1.59
SPTAN1-203ENST00000372739 CSMD1Q96PZ7 3565 aa5.14□□□□□ -1.59
SPTAN1-203ENST00000372739 CUBNO60494 3623 aa5.12□□□□□ -1.59
SPTAN1-203ENST00000372739 ATMQ13315 3056 aa5.12□□□□□ -1.59
SPTAN1-203ENST00000372739 KRTAP10-8P60410 259 aa5.11□□□□□ -1.59
SPTAN1-203ENST00000372739 UTP20O75691 2785 aaKnown RBP5.1□□□□□ -1.59
SPTAN1-203ENST00000372739 PP632Q6XCG6 107 aa5.1□□□□□ -1.59
SPTAN1-203ENST00000372739 C10orf95Q9H7T3 257 aa5.1□□□□□ -1.59
SPTAN1-203ENST00000372739 NDUFAF8A1L188 74 aa5.1□□□□□ -1.59
SPTAN1-203ENST00000372739 KALRNO60229 2985 aa5.1□□□□□ -1.59
SPTAN1-203ENST00000372739 SPENQ96T58 3664 aaKnown RBP5.1□□□□□ -1.59
SPTAN1-203ENST00000372739 ITPR1Q14643 2758 aa5.1□□□□□ -1.59
SPTAN1-203ENST00000372739 PRO2289Q9P1D8 64 aa5.09□□□□□ -1.59
SPTAN1-203ENST00000372739 NBEAQ8NFP9 2946 aa5.09□□□□□ -1.59
SPTAN1-203ENST00000372739 SMG1Q96Q15 3661 aaKnown RBP5.06□□□□□ -1.6
SPTAN1-203ENST00000372739 LRBAP50851 2863 aa5.05□□□□□ -1.6
SPTAN1-203ENST00000372739 XP32Q5T750 250 aa5.04□□□□□ -1.6
SPTAN1-203ENST00000372739 P0C880 135 aa5.04□□□□□ -1.6
SPTAN1-203ENST00000372739 SVEP1Q4LDE5 3571 aa5.04□□□□□ -1.6
SPTAN1-203ENST00000372739 FLNCQ14315 2725 aa5.03□□□□□ -1.6
SPTAN1-203ENST00000372739 A0A1B0GVY2 172 aa5.02□□□□□ -1.61
SPTAN1-203ENST00000372739 KRTAP10-10P60014 251 aa5.02□□□□□ -1.61
SPTAN1-203ENST00000372739 ZFHX3Q15911 3703 aa5.01□□□□□ -1.61
SPTAN1-203ENST00000372739 KRTAP1-4P0C5Y4 121 aa5□□□□□ -1.61
SPTAN1-203ENST00000372739 ASH1LQ9NR48 2969 aaKnown RBP5□□□□□ -1.61
SPTAN1-203ENST00000372739 DMXL2Q8TDJ6 3036 aa5□□□□□ -1.61
SPTAN1-203ENST00000372739 TACC2O95359 2948 aa5□□□□□ -1.61
SPTAN1-203ENST00000372739 TPRXLQ17RH7 258 aa5□□□□□ -1.61
SPTAN1-203ENST00000372739 HIVEP1P15822 2718 aa5□□□□□ -1.61
SPTAN1-203ENST00000372739 DMXL1Q9Y485 3027 aa5□□□□□ -1.61
SPTAN1-203ENST00000372739 CRYBG3Q68DQ2 2970 aa4.99□□□□□ -1.61
SPTAN1-203ENST00000372739 CSMD2Q7Z408 3487 aa4.96□□□□□ -1.61
SPTAN1-203ENST00000372739 ZZEF1O43149 2961 aa4.94□□□□□ -1.62
SPTAN1-203ENST00000372739 H0YAA0 97 aa4.92□□□□□ -1.62
SPTAN1-203ENST00000372739 NIPBLQ6KC79 2804 aaeCLIP4.88□□□□□ -1.63
SPTAN1-203ENST00000372739 CELSR2Q9HCU4 2923 aa4.86□□□□□ -1.63
SPTAN1-203ENST00000372739 KRTAP13-3Q3SY46 172 aa4.86□□□□□ -1.63
SPTAN1-203ENST00000372739 TENM4Q6N022 2769 aa4.84□□□□□ -1.63
SPTAN1-203ENST00000372739 VPS13CQ709C8 3753 aa4.83□□□□□ -1.64
SPTAN1-203ENST00000372739 TENM1Q9UKZ4 2725 aa4.8□□□□□ -1.64
SPTAN1-203ENST00000372739 DCHS2Q6V1P9 2916 aa4.79□□□□□ -1.64
SPTAN1-203ENST00000372739 CELSR1Q9NYQ6 3014 aa4.78□□□□□ -1.64
SPTAN1-203ENST00000372739 NBPF19A0A087WUL8 3843 aa4.76□□□□□ -1.65
SPTAN1-203ENST00000372739 HRNRQ86YZ3 2850 aaPredicted RBP4.72□□□□□ -1.65
SPTAN1-203ENST00000372739 NF1P21359 2839 aa4.71□□□□□ -1.66
SPTAN1-203ENST00000372739 ZANQ9Y493 2812 aa4.71□□□□□ -1.66
SPTAN1-203ENST00000372739 TGP01266 2768 aa4.7□□□□□ -1.66
SPTAN1-203ENST00000372739 BSNQ9UPA5 3926 aa4.67□□□□□ -1.66
SPTAN1-203ENST00000372739 FBN2P35556 2912 aa4.65□□□□□ -1.66
SPTAN1-203ENST00000372739 TENM3Q9P273 2699 aa4.65□□□□□ -1.66
SPTAN1-203ENST00000372739 KRTAP12-2P59991 146 aa4.64□□□□□ -1.67
SPTAN1-203ENST00000372739 KRTAP13-4Q3LI77 160 aa4.63□□□□□ -1.67
SPTAN1-203ENST00000372739 PDZD2O15018 2839 aa4.63□□□□□ -1.67
SPTAN1-203ENST00000372739 MXRA5Q9NR99 2828 aa4.61□□□□□ -1.67
SPTAN1-203ENST00000372739 TENM2Q9NT68 2774 aa4.6□□□□□ -1.67
SPTAN1-203ENST00000372739 KRTAP12-1P59990 96 aa4.55□□□□□ -1.68
SPTAN1-203ENST00000372739 PKD1L1Q8TDX9 2849 aa4.48□□□□□ -1.69
SPTAN1-203ENST00000372739 OTOGQ6ZRI0 2925 aa4.48□□□□□ -1.69
SPTAN1-203ENST00000372739 KRTAP15-1Q3LI76 137 aa4.47□□□□□ -1.69
SPTAN1-203ENST00000372739 VWFP04275 2813 aa4.45□□□□□ -1.7
SPTAN1-203ENST00000372739 KRTAP3-1Q9BYR8 98 aa4.44□□□□□ -1.7
SPTAN1-203ENST00000372739 ZNF469Q96JG9 3925 aaPredicted RBP4.38□□□□□ -1.71
SPTAN1-203ENST00000372739 KRTAP10-6P60371 365 aaPredicted RBP4.35□□□□□ -1.71
SPTAN1-203ENST00000372739 AKAP9Q99996 3911 aa4.34□□□□□ -1.71
SPTAN1-203ENST00000372739 CRCT1Q9UGL9 99 aa4.33□□□□□ -1.72
SPTAN1-203ENST00000372739 CSMD3Q7Z407 3707 aa4.32□□□□□ -1.72
SPTAN1-203ENST00000372739 ANK3Q12955 4377 aaKnown RBP4.3□□□□□ -1.72
SPTAN1-203ENST00000372739 INE1O15225 51 aa4.27□□□□□ -1.73
SPTAN1-203ENST00000372739 KRTAP10-12P60413 245 aa4.26□□□□□ -1.73
SPTAN1-203ENST00000372739 MEGF8Q7Z7M0 2845 aa4.25□□□□□ -1.73
SPTAN1-203ENST00000372739 FBN3Q75N90 2809 aa4.25□□□□□ -1.73
SPTAN1-203ENST00000372739 MT1HL1P0DM35 61 aa4.23□□□□□ -1.73
SPTAN1-203ENST00000372739 TRRAPQ9Y4A5 3859 aa4.22□□□□□ -1.73
SPTAN1-203ENST00000372739 ALMS1Q8TCU4 4167 aa4.22□□□□□ -1.73
SPTAN1-203ENST00000372739 COL7A1Q02388 2944 aa4.2□□□□□ -1.74
SPTAN1-203ENST00000372739 FBN1P35555 2871 aaKnown RBP4.2□□□□□ -1.74
SPTAN1-203ENST00000372739 KRTAP3-3Q9BYR6 98 aa4.17□□□□□ -1.74
SPTAN1-203ENST00000372739 KRTAP3-2Q9BYR7 98 aa4.17□□□□□ -1.74
SPTAN1-203ENST00000372739 SRRM2Q9UQ35 2752 aaKnown RBP4.14□□□□□ -1.75
SPTAN1-203ENST00000372739 KRTAP23-1A1A580 65 aa4.14□□□□□ -1.75
SPTAN1-203ENST00000372739 KRTAP12-3P60328 96 aa4.12□□□□□ -1.75
SPTAN1-203ENST00000372739 KRTAP10-4P60372 401 aaPredicted RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms