RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 RPS29P62273 56 aaKnown RBP4.76□□□□□ -1.65
ABCA4-201ENST00000370225 TACC2O95359 2948 aa4.76□□□□□ -1.65
ABCA4-201ENST00000370225 A0A1B0GVY2 172 aa4.76□□□□□ -1.65
ABCA4-201ENST00000370225 ATMQ13315 3056 aa4.76□□□□□ -1.65
ABCA4-201ENST00000370225 KRTAP25-1Q3LHN0 102 aa4.75□□□□□ -1.65
ABCA4-201ENST00000370225 COL12A1Q99715 3063 aa4.74□□□□□ -1.65
ABCA4-201ENST00000370225 ASB16-AS1Q495Z4 193 aa4.74□□□□□ -1.65
ABCA4-201ENST00000370225 UTP20O75691 2785 aaKnown RBP4.74□□□□□ -1.65
ABCA4-201ENST00000370225 ITPR1Q14643 2758 aa4.74□□□□□ -1.65
ABCA4-201ENST00000370225 NSD1Q96L73 2696 aaPredicted RBP4.73□□□□□ -1.65
ABCA4-201ENST00000370225 APCP25054 2843 aa4.72□□□□□ -1.65
ABCA4-201ENST00000370225 ASH1LQ9NR48 2969 aaKnown RBP4.71□□□□□ -1.66
ABCA4-201ENST00000370225 KRTAP13-1Q8IUC0 172 aa4.7□□□□□ -1.66
ABCA4-201ENST00000370225 KMT2BQ9UMN6 2715 aaPredicted RBP4.7□□□□□ -1.66
ABCA4-201ENST00000370225 EYSQ5T1H1 3165 aa4.7□□□□□ -1.66
ABCA4-201ENST00000370225 HIVEP1P15822 2718 aa4.7□□□□□ -1.66
ABCA4-201ENST00000370225 A6NN06 94 aa4.69□□□□□ -1.66
ABCA4-201ENST00000370225 MYO15AQ9UKN7 3530 aa4.69□□□□□ -1.66
ABCA4-201ENST00000370225 ADGRG4Q8IZF6 3080 aa4.68□□□□□ -1.66
ABCA4-201ENST00000370225 KRTAP21-3Q3LHN1 58 aa4.67□□□□□ -1.66
ABCA4-201ENST00000370225 TNP1P09430 55 aa4.65□□□□□ -1.67
ABCA4-201ENST00000370225 KRTAP10-8P60410 259 aa4.65□□□□□ -1.67
ABCA4-201ENST00000370225 C10orf95Q9H7T3 257 aa4.64□□□□□ -1.67
ABCA4-201ENST00000370225 ASPMQ8IZT6 3477 aa4.61□□□□□ -1.67
ABCA4-201ENST00000370225 XP32Q5T750 250 aa4.61□□□□□ -1.67
ABCA4-201ENST00000370225 ZZEF1O43149 2961 aa4.6□□□□□ -1.67
ABCA4-201ENST00000370225 NBEAQ8NFP9 2946 aa4.6□□□□□ -1.67
ABCA4-201ENST00000370225 TNRC18O15417 2968 aaPredicted RBP4.6□□□□□ -1.67
ABCA4-201ENST00000370225 FLNCQ14315 2725 aa4.59□□□□□ -1.67
ABCA4-201ENST00000370225 WDFY3Q8IZQ1 3526 aa4.57□□□□□ -1.68
ABCA4-201ENST00000370225 DMXL1Q9Y485 3027 aa4.57□□□□□ -1.68
ABCA4-201ENST00000370225 KRTAP10-10P60014 251 aa4.57□□□□□ -1.68
ABCA4-201ENST00000370225 CELSR2Q9HCU4 2923 aa4.57□□□□□ -1.68
ABCA4-201ENST00000370225 TENM4Q6N022 2769 aa4.55□□□□□ -1.68
ABCA4-201ENST00000370225 KRTAP1-4P0C5Y4 121 aa4.55□□□□□ -1.68
ABCA4-201ENST00000370225 NBPF19A0A087WUL8 3843 aa4.53□□□□□ -1.68
ABCA4-201ENST00000370225 LOC400499M0QZD8 3231 aa4.51□□□□□ -1.69
ABCA4-201ENST00000370225 DCHS2Q6V1P9 2916 aa4.5□□□□□ -1.69
ABCA4-201ENST00000370225 TPRXLQ17RH7 258 aa4.47□□□□□ -1.69
ABCA4-201ENST00000370225 RELNP78509 3460 aa4.45□□□□□ -1.7
ABCA4-201ENST00000370225 PP632Q6XCG6 107 aa4.45□□□□□ -1.7
ABCA4-201ENST00000370225 ZFHX4Q86UP3 3567 aa4.43□□□□□ -1.7
ABCA4-201ENST00000370225 TENM1Q9UKZ4 2725 aa4.42□□□□□ -1.7
ABCA4-201ENST00000370225 PRO2289Q9P1D8 64 aa4.42□□□□□ -1.7
ABCA4-201ENST00000370225 DCHS1Q96JQ0 3298 aa4.41□□□□□ -1.7
ABCA4-201ENST00000370225 KRTAP13-3Q3SY46 172 aa4.41□□□□□ -1.7
ABCA4-201ENST00000370225 ZANQ9Y493 2812 aa4.41□□□□□ -1.7
ABCA4-201ENST00000370225 HRNRQ86YZ3 2850 aaPredicted RBP4.4□□□□□ -1.7
ABCA4-201ENST00000370225 LAMA5O15230 3695 aa4.4□□□□□ -1.7
ABCA4-201ENST00000370225 CELSR1Q9NYQ6 3014 aa4.4□□□□□ -1.71
ABCA4-201ENST00000370225 NF1P21359 2839 aa4.39□□□□□ -1.71
ABCA4-201ENST00000370225 H0YAA0 97 aa4.39□□□□□ -1.71
ABCA4-201ENST00000370225 TENM2Q9NT68 2774 aa4.39□□□□□ -1.71
ABCA4-201ENST00000370225 FBN2P35556 2912 aa4.39□□□□□ -1.71
ABCA4-201ENST00000370225 NIPBLQ6KC79 2804 aaeCLIP4.38□□□□□ -1.71
ABCA4-201ENST00000370225 P0C880 135 aa4.37□□□□□ -1.71
ABCA4-201ENST00000370225 CSMD1Q96PZ7 3565 aa4.35□□□□□ -1.71
ABCA4-201ENST00000370225 DMDP11532 3685 aa4.32□□□□□ -1.72
ABCA4-201ENST00000370225 TENM3Q9P273 2699 aa4.28□□□□□ -1.72
ABCA4-201ENST00000370225 PKD1L1Q8TDX9 2849 aa4.28□□□□□ -1.72
ABCA4-201ENST00000370225 ZFHX3Q15911 3703 aa4.27□□□□□ -1.73
ABCA4-201ENST00000370225 VWFP04275 2813 aa4.26□□□□□ -1.73
ABCA4-201ENST00000370225 TGP01266 2768 aa4.24□□□□□ -1.73
ABCA4-201ENST00000370225 SMG1Q96Q15 3661 aaKnown RBP4.23□□□□□ -1.73
ABCA4-201ENST00000370225 KRTAP12-2P59991 146 aa4.21□□□□□ -1.73
ABCA4-201ENST00000370225 SPENQ96T58 3664 aaKnown RBP4.21□□□□□ -1.74
ABCA4-201ENST00000370225 MXRA5Q9NR99 2828 aa4.2□□□□□ -1.74
ABCA4-201ENST00000370225 SVEP1Q4LDE5 3571 aa4.19□□□□□ -1.74
ABCA4-201ENST00000370225 CSMD2Q7Z408 3487 aa4.13□□□□□ -1.75
ABCA4-201ENST00000370225 CUBNO60494 3623 aa4.12□□□□□ -1.75
ABCA4-201ENST00000370225 PDZD2O15018 2839 aa4.11□□□□□ -1.75
ABCA4-201ENST00000370225 ANK3Q12955 4377 aaKnown RBP4.09□□□□□ -1.75
ABCA4-201ENST00000370225 KRTAP13-4Q3LI77 160 aa4.07□□□□□ -1.76
ABCA4-201ENST00000370225 KRTAP23-1A1A580 65 aa4.06□□□□□ -1.76
ABCA4-201ENST00000370225 KRTAP12-1P59990 96 aa4.06□□□□□ -1.76
ABCA4-201ENST00000370225 KRTAP15-1Q3LI76 137 aa4.05□□□□□ -1.76
ABCA4-201ENST00000370225 MUC3AQ02505 3323 aa4.04□□□□□ -1.76
ABCA4-201ENST00000370225 CRCT1Q9UGL9 99 aa4.04□□□□□ -1.76
ABCA4-201ENST00000370225 TRRAPQ9Y4A5 3859 aa4.04□□□□□ -1.76
ABCA4-201ENST00000370225 FBN1P35555 2871 aaKnown RBP4.03□□□□□ -1.76
ABCA4-201ENST00000370225 KRTAP3-1Q9BYR8 98 aa4.03□□□□□ -1.76
ABCA4-201ENST00000370225 BSNQ9UPA5 3926 aa3.98□□□□□ -1.77
ABCA4-201ENST00000370225 KRTAP4-5Q9BYR2 181 aa3.97□□□□□ -1.77
ABCA4-201ENST00000370225 VPS13CQ709C8 3753 aa3.97□□□□□ -1.77
ABCA4-201ENST00000370225 OTOGQ6ZRI0 2925 aa3.96□□□□□ -1.77
ABCA4-201ENST00000370225 SRRM2Q9UQ35 2752 aaKnown RBP3.95□□□□□ -1.78
ABCA4-201ENST00000370225 INE1O15225 51 aa3.94□□□□□ -1.78
ABCA4-201ENST00000370225 HUWE1Q7Z6Z7 4374 aaKnown RBP3.93□□□□□ -1.78
ABCA4-201ENST00000370225 MT1HL1P0DM35 61 aa3.92□□□□□ -1.78
ABCA4-201ENST00000370225 FBN3Q75N90 2809 aa3.91□□□□□ -1.78
ABCA4-201ENST00000370225 MEGF8Q7Z7M0 2845 aa3.89□□□□□ -1.79
ABCA4-201ENST00000370225 COL7A1Q02388 2944 aa3.89□□□□□ -1.79
ABCA4-201ENST00000370225 KRTAP10-6P60371 365 aaPredicted RBP3.87□□□□□ -1.79
ABCA4-201ENST00000370225 CSMD3Q7Z407 3707 aa3.87□□□□□ -1.79
ABCA4-201ENST00000370225 KRTAP10-12P60413 245 aa3.85□□□□□ -1.79
ABCA4-201ENST00000370225 ALMS1Q8TCU4 4167 aa3.84□□□□□ -1.79
ABCA4-201ENST00000370225 AKAP9Q99996 3911 aa3.79□□□□□ -1.8
ABCA4-201ENST00000370225 KRTAP3-3Q9BYR6 98 aa3.76□□□□□ -1.81
ABCA4-201ENST00000370225 KRTAP10-4P60372 401 aaPredicted RBP3.73□□□□□ -1.81
ABCA4-201ENST00000370225 KRTAP3-2Q9BYR7 98 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 160.1 ms