RNA–Protein interactions for RNA: ENST00000370203.8

TMEM56-201, Transcript of transmembrane protein 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM56, Length 6,822 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-201ENST00000370203 FRYLO94915 3013 aa6.87□□□□□ -1.31
TMEM56-201ENST00000370203 STAB2Q8WWQ8 2551 aa6.87□□□□□ -1.31
TMEM56-201ENST00000370203 KRTAP25-1Q3LHN0 102 aa6.86□□□□□ -1.31
TMEM56-201ENST00000370203 ASH1LQ9NR48 2969 aaKnown RBP6.85□□□□□ -1.31
TMEM56-201ENST00000370203 COL12A1Q99715 3063 aa6.85□□□□□ -1.31
TMEM56-201ENST00000370203 UBR5O95071 2799 aaPredicted RBP6.85□□□□□ -1.31
TMEM56-201ENST00000370203 KRTAP10-8P60410 259 aa6.85□□□□□ -1.31
TMEM56-201ENST00000370203 ITPR2Q14571 2701 aa6.85□□□□□ -1.31
TMEM56-201ENST00000370203 KRTAP13-1Q8IUC0 172 aa6.84□□□□□ -1.31
TMEM56-201ENST00000370203 ASB16-AS1Q495Z4 193 aa6.82□□□□□ -1.32
TMEM56-201ENST00000370203 RPS29P62273 56 aaKnown RBP6.81□□□□□ -1.32
TMEM56-201ENST00000370203 NDUFAF8A1L188 74 aa6.81□□□□□ -1.32
TMEM56-201ENST00000370203 HIVEP1P15822 2718 aa6.79□□□□□ -1.32
TMEM56-201ENST00000370203 TNP1P09430 55 aa6.79□□□□□ -1.32
TMEM56-201ENST00000370203 ADGRG4Q8IZF6 3080 aa6.79□□□□□ -1.32
TMEM56-201ENST00000370203 KRTAP16-1A8MUX0 517 aa6.77□□□□□ -1.33
TMEM56-201ENST00000370203 ASPMQ8IZT6 3477 aa6.76□□□□□ -1.33
TMEM56-201ENST00000370203 UTP20O75691 2785 aaKnown RBP6.75□□□□□ -1.33
TMEM56-201ENST00000370203 NSD1Q96L73 2696 aaPredicted RBP6.75□□□□□ -1.33
TMEM56-201ENST00000370203 A6NN06 94 aa6.75□□□□□ -1.33
TMEM56-201ENST00000370203 ITPR1Q14643 2758 aa6.75□□□□□ -1.33
TMEM56-201ENST00000370203 XP32Q5T750 250 aa6.73□□□□□ -1.33
TMEM56-201ENST00000370203 APCP25054 2843 aa6.72□□□□□ -1.33
TMEM56-201ENST00000370203 WDFY3Q8IZQ1 3526 aa6.72□□□□□ -1.33
TMEM56-201ENST00000370203 NBEAQ8NFP9 2946 aa6.7□□□□□ -1.34
TMEM56-201ENST00000370203 KRTAP10-10P60014 251 aa6.7□□□□□ -1.34
TMEM56-201ENST00000370203 ZZEF1O43149 2961 aa6.67□□□□□ -1.34
TMEM56-201ENST00000370203 KMT2BQ9UMN6 2715 aaPredicted RBP6.67□□□□□ -1.34
TMEM56-201ENST00000370203 KRTAP1-4P0C5Y4 121 aa6.64□□□□□ -1.35
TMEM56-201ENST00000370203 DCHS1Q96JQ0 3298 aa6.58□□□□□ -1.36
TMEM56-201ENST00000370203 DMXL1Q9Y485 3027 aa6.58□□□□□ -1.36
TMEM56-201ENST00000370203 LOC400499M0QZD8 3231 aa6.57□□□□□ -1.36
TMEM56-201ENST00000370203 ZFHX4Q86UP3 3567 aa6.56□□□□□ -1.36
TMEM56-201ENST00000370203 CELSR2Q9HCU4 2923 aa6.55□□□□□ -1.36
TMEM56-201ENST00000370203 RELNP78509 3460 aa6.53□□□□□ -1.36
TMEM56-201ENST00000370203 KRTAP21-3Q3LHN1 58 aa6.53□□□□□ -1.36
TMEM56-201ENST00000370203 TNRC18O15417 2968 aaPredicted RBP6.52□□□□□ -1.37
TMEM56-201ENST00000370203 TENM4Q6N022 2769 aa6.51□□□□□ -1.37
TMEM56-201ENST00000370203 H0YAA0 97 aa6.5□□□□□ -1.37
TMEM56-201ENST00000370203 NBPF19A0A087WUL8 3843 aa6.49□□□□□ -1.37
TMEM56-201ENST00000370203 P0C880 135 aa6.48□□□□□ -1.37
TMEM56-201ENST00000370203 FLNCQ14315 2725 aa6.47□□□□□ -1.37
TMEM56-201ENST00000370203 DCHS2Q6V1P9 2916 aa6.46□□□□□ -1.38
TMEM56-201ENST00000370203 CSMD1Q96PZ7 3565 aa6.45□□□□□ -1.38
TMEM56-201ENST00000370203 TPRXLQ17RH7 258 aa6.44□□□□□ -1.38
TMEM56-201ENST00000370203 LAMA5O15230 3695 aa6.43□□□□□ -1.38
TMEM56-201ENST00000370203 KRTAP13-3Q3SY46 172 aa6.4□□□□□ -1.38
TMEM56-201ENST00000370203 TENM2Q9NT68 2774 aa6.37□□□□□ -1.39
TMEM56-201ENST00000370203 PRO2289Q9P1D8 64 aa6.36□□□□□ -1.39
TMEM56-201ENST00000370203 FBN2P35556 2912 aa6.3□□□□□ -1.4
TMEM56-201ENST00000370203 PP632Q6XCG6 107 aa6.3□□□□□ -1.4
TMEM56-201ENST00000370203 CELSR1Q9NYQ6 3014 aa6.3□□□□□ -1.4
TMEM56-201ENST00000370203 ZANQ9Y493 2812 aa6.29□□□□□ -1.4
TMEM56-201ENST00000370203 HRNRQ86YZ3 2850 aaPredicted RBP6.28□□□□□ -1.4
TMEM56-201ENST00000370203 DMDP11532 3685 aa6.28□□□□□ -1.4
TMEM56-201ENST00000370203 TENM1Q9UKZ4 2725 aa6.26□□□□□ -1.41
TMEM56-201ENST00000370203 KRTAP12-2P59991 146 aa6.25□□□□□ -1.41
TMEM56-201ENST00000370203 NF1P21359 2839 aa6.24□□□□□ -1.41
TMEM56-201ENST00000370203 SMG1Q96Q15 3661 aaKnown RBP6.22□□□□□ -1.41
TMEM56-201ENST00000370203 SVEP1Q4LDE5 3571 aa6.18□□□□□ -1.42
TMEM56-201ENST00000370203 NIPBLQ6KC79 2804 aaeCLIP6.17□□□□□ -1.42
TMEM56-201ENST00000370203 PKD1L1Q8TDX9 2849 aa6.14□□□□□ -1.43
TMEM56-201ENST00000370203 CUBNO60494 3623 aa6.13□□□□□ -1.43
TMEM56-201ENST00000370203 VWFP04275 2813 aa6.12□□□□□ -1.43
TMEM56-201ENST00000370203 ZFHX3Q15911 3703 aa6.11□□□□□ -1.43
TMEM56-201ENST00000370203 SPENQ96T58 3664 aaKnown RBP6.11□□□□□ -1.43
TMEM56-201ENST00000370203 TGP01266 2768 aa6.1□□□□□ -1.43
TMEM56-201ENST00000370203 CSMD2Q7Z408 3487 aa6.08□□□□□ -1.44
TMEM56-201ENST00000370203 CRCT1Q9UGL9 99 aa6.07□□□□□ -1.44
TMEM56-201ENST00000370203 TENM3Q9P273 2699 aa6.07□□□□□ -1.44
TMEM56-201ENST00000370203 MXRA5Q9NR99 2828 aa6□□□□□ -1.45
TMEM56-201ENST00000370203 KRTAP12-1P59990 96 aa5.98□□□□□ -1.45
TMEM56-201ENST00000370203 KRTAP15-1Q3LI76 137 aa5.97□□□□□ -1.45
TMEM56-201ENST00000370203 KRTAP13-4Q3LI77 160 aa5.95□□□□□ -1.46
TMEM56-201ENST00000370203 KRTAP3-1Q9BYR8 98 aa5.95□□□□□ -1.46
TMEM56-201ENST00000370203 ANK3Q12955 4377 aaKnown RBP5.94□□□□□ -1.46
TMEM56-201ENST00000370203 MUC3AQ02505 3323 aa5.87□□□□□ -1.47
TMEM56-201ENST00000370203 PDZD2O15018 2839 aa5.87□□□□□ -1.47
TMEM56-201ENST00000370203 KRTAP4-5Q9BYR2 181 aa5.86□□□□□ -1.47
TMEM56-201ENST00000370203 TRRAPQ9Y4A5 3859 aa5.79□□□□□ -1.48
TMEM56-201ENST00000370203 FBN1P35555 2871 aaKnown RBP5.78□□□□□ -1.48
TMEM56-201ENST00000370203 VPS13CQ709C8 3753 aa5.71□□□□□ -1.5
TMEM56-201ENST00000370203 KRTAP10-6P60371 365 aaPredicted RBP5.71□□□□□ -1.5
TMEM56-201ENST00000370203 HUWE1Q7Z6Z7 4374 aaKnown RBP5.7□□□□□ -1.5
TMEM56-201ENST00000370203 MT1HL1P0DM35 61 aa5.69□□□□□ -1.5
TMEM56-201ENST00000370203 BSNQ9UPA5 3926 aa5.68□□□□□ -1.5
TMEM56-201ENST00000370203 CSMD3Q7Z407 3707 aa5.68□□□□□ -1.5
TMEM56-201ENST00000370203 SRRM2Q9UQ35 2752 aaKnown RBP5.67□□□□□ -1.5
TMEM56-201ENST00000370203 OTOGQ6ZRI0 2925 aa5.65□□□□□ -1.51
TMEM56-201ENST00000370203 KRTAP10-12P60413 245 aa5.63□□□□□ -1.51
TMEM56-201ENST00000370203 FBN3Q75N90 2809 aa5.62□□□□□ -1.51
TMEM56-201ENST00000370203 MEGF8Q7Z7M0 2845 aa5.59□□□□□ -1.52
TMEM56-201ENST00000370203 KRTAP3-3Q9BYR6 98 aa5.53□□□□□ -1.52
TMEM56-201ENST00000370203 COL7A1Q02388 2944 aa5.52□□□□□ -1.53
TMEM56-201ENST00000370203 LORP23490 312 aaPredicted RBP5.49□□□□□ -1.53
TMEM56-201ENST00000370203 LCE3AQ5TA76 89 aa5.49□□□□□ -1.53
TMEM56-201ENST00000370203 KRTAP3-2Q9BYR7 98 aa5.48□□□□□ -1.53
TMEM56-201ENST00000370203 ALMS1Q8TCU4 4167 aa5.43□□□□□ -1.54
TMEM56-201ENST00000370203 KRTAP12-3P60328 96 aa5.42□□□□□ -1.54
TMEM56-201ENST00000370203 KRTAP10-4P60372 401 aaPredicted RBP5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms