RNA–Protein interactions for RNA: ENST00000369301.3

NHLRC2-201, Transcript of NHL repeat containing 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NHLRC2, Length 11,051 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC2-201ENST00000369301 KRTAP1-4P0C5Y4 121 aa4.25□□□□□ -1.73
NHLRC2-201ENST00000369301 TENM2Q9NT68 2774 aa4.23□□□□□ -1.73
NHLRC2-201ENST00000369301 FRYQ5TBA9 3013 aa4.22□□□□□ -1.73
NHLRC2-201ENST00000369301 MKI67P46013 3256 aaKnown RBP4.21□□□□□ -1.74
NHLRC2-201ENST00000369301 TNRC18O15417 2968 aaPredicted RBP4.21□□□□□ -1.74
NHLRC2-201ENST00000369301 CRYBG3Q68DQ2 2970 aa4.19□□□□□ -1.74
NHLRC2-201ENST00000369301 HTTP42858 3142 aa4.19□□□□□ -1.74
NHLRC2-201ENST00000369301 KRTAP10-6P60371 365 aaPredicted RBP4.18□□□□□ -1.74
NHLRC2-201ENST00000369301 PCNTO95613 3336 aa4.16□□□□□ -1.74
NHLRC2-201ENST00000369301 VWFP04275 2813 aa4.14□□□□□ -1.75
NHLRC2-201ENST00000369301 CRCT1Q9UGL9 99 aa4.14□□□□□ -1.75
NHLRC2-201ENST00000369301 A0A0C4DFX4 3053 aa4.13□□□□□ -1.75
NHLRC2-201ENST00000369301 DNAH12Q6ZR08 3092 aa4.12□□□□□ -1.75
NHLRC2-201ENST00000369301 SRRM2Q9UQ35 2752 aaKnown RBP4.12□□□□□ -1.75
NHLRC2-201ENST00000369301 RANBP2P49792 3224 aaKnown RBP4.1□□□□□ -1.75
NHLRC2-201ENST00000369301 CELSR2Q9HCU4 2923 aa4.1□□□□□ -1.75
NHLRC2-201ENST00000369301 CHD7Q9P2D1 2997 aa4.1□□□□□ -1.75
NHLRC2-201ENST00000369301 LAMA3Q16787 3333 aa4.1□□□□□ -1.75
NHLRC2-201ENST00000369301 KRTAP10-12P60413 245 aa4.09□□□□□ -1.75
NHLRC2-201ENST00000369301 KRTAP12-1P59990 96 aa4.08□□□□□ -1.76
NHLRC2-201ENST00000369301 ASH1LQ9NR48 2969 aaKnown RBP4.08□□□□□ -1.76
NHLRC2-201ENST00000369301 PKD1L1Q8TDX9 2849 aa4.07□□□□□ -1.76
NHLRC2-201ENST00000369301 ZANQ9Y493 2812 aa4.06□□□□□ -1.76
NHLRC2-201ENST00000369301 BRCA2P51587 3418 aa4.05□□□□□ -1.76
NHLRC2-201ENST00000369301 C5orf42Q9H799 3197 aa4.04□□□□□ -1.76
NHLRC2-201ENST00000369301 LAMA2P24043 3122 aaKnown RBP4.04□□□□□ -1.76
NHLRC2-201ENST00000369301 MGAQ8IWI9 3026 aa4.02□□□□□ -1.77
NHLRC2-201ENST00000369301 REV3LO60673 3130 aa4.02□□□□□ -1.77
NHLRC2-201ENST00000369301 FRYLO94915 3013 aa3.99□□□□□ -1.77
NHLRC2-201ENST00000369301 UNC80Q8N2C7 3258 aa3.98□□□□□ -1.77
NHLRC2-201ENST00000369301 FBN3Q75N90 2809 aa3.96□□□□□ -1.78
NHLRC2-201ENST00000369301 PRUNE2Q8WUY3 3088 aa3.95□□□□□ -1.78
NHLRC2-201ENST00000369301 DCHS2Q6V1P9 2916 aa3.95□□□□□ -1.78
NHLRC2-201ENST00000369301 LAMA1P25391 3075 aa3.92□□□□□ -1.78
NHLRC2-201ENST00000369301 CFAP54Q96N23 3096 aa3.91□□□□□ -1.78
NHLRC2-201ENST00000369301 KRTAP12-3P60328 96 aa3.9□□□□□ -1.79
NHLRC2-201ENST00000369301 KRTAP10-5P60370 271 aa3.89□□□□□ -1.79
NHLRC2-201ENST00000369301 SZT2Q5T011 3432 aa3.88□□□□□ -1.79
NHLRC2-201ENST00000369301 XIRP2A4UGR9 3374 aa3.87□□□□□ -1.79
NHLRC2-201ENST00000369301 KRTAP23-1A1A580 65 aa3.86□□□□□ -1.79
NHLRC2-201ENST00000369301 COL6A3P12111 3177 aa3.86□□□□□ -1.79
NHLRC2-201ENST00000369301 CDH23Q9H251 3354 aa3.85□□□□□ -1.79
NHLRC2-201ENST00000369301 DMXL2Q8TDJ6 3036 aa3.85□□□□□ -1.79
NHLRC2-201ENST00000369301 COL12A1Q99715 3063 aa3.83□□□□□ -1.8
NHLRC2-201ENST00000369301 MXRA5Q9NR99 2828 aa3.82□□□□□ -1.8
NHLRC2-201ENST00000369301 VCANP13611 3396 aa3.82□□□□□ -1.8
NHLRC2-201ENST00000369301 COL7A1Q02388 2944 aa3.81□□□□□ -1.8
NHLRC2-201ENST00000369301 TACC2O95359 2948 aa3.81□□□□□ -1.8
NHLRC2-201ENST00000369301 KRTAP8-1Q8IUC2 63 aa3.8□□□□□ -1.8
NHLRC2-201ENST00000369301 WDFY4Q6ZS81 3184 aa3.78□□□□□ -1.8
NHLRC2-201ENST00000369301 EYSQ5T1H1 3165 aa3.76□□□□□ -1.81
NHLRC2-201ENST00000369301 DMXL1Q9Y485 3027 aa3.76□□□□□ -1.81
NHLRC2-201ENST00000369301 KRTAP10-7P60409 375 aaPredicted RBP3.75□□□□□ -1.81
NHLRC2-201ENST00000369301 NBEAQ8NFP9 2946 aa3.75□□□□□ -1.81
NHLRC2-201ENST00000369301 CELSR1Q9NYQ6 3014 aa3.74□□□□□ -1.81
NHLRC2-201ENST00000369301 ZZEF1O43149 2961 aa3.73□□□□□ -1.81
NHLRC2-201ENST00000369301 ATMQ13315 3056 aa3.71□□□□□ -1.82
NHLRC2-201ENST00000369301 MEGF8Q7Z7M0 2845 aa3.7□□□□□ -1.82
NHLRC2-201ENST00000369301 KRTAP3-1Q9BYR8 98 aa3.66□□□□□ -1.82
NHLRC2-201ENST00000369301 LCE3AQ5TA76 89 aa3.65□□□□□ -1.83
NHLRC2-201ENST00000369301 LORP23490 312 aaPredicted RBP3.6□□□□□ -1.83
NHLRC2-201ENST00000369301 CELSR3Q9NYQ7 3312 aa3.58□□□□□ -1.84
NHLRC2-201ENST00000369301 VPS13AQ96RL7 3174 aa3.58□□□□□ -1.84
NHLRC2-201ENST00000369301 FBN2P35556 2912 aa3.57□□□□□ -1.84
NHLRC2-201ENST00000369301 ADGRG4Q8IZF6 3080 aa3.55□□□□□ -1.84
NHLRC2-201ENST00000369301 SPEGQ15772 3267 aa3.55□□□□□ -1.84
NHLRC2-201ENST00000369301 FREM2Q5SZK8 3169 aa3.55□□□□□ -1.84
NHLRC2-201ENST00000369301 MUC3AQ02505 3323 aa3.49□□□□□ -1.85
NHLRC2-201ENST00000369301 CFAP47Q6ZTR5 3102 aa3.48□□□□□ -1.85
NHLRC2-201ENST00000369301 KRTAP19-4Q3LI73 84 aa3.48□□□□□ -1.85
NHLRC2-201ENST00000369301 SPTBN5Q9NRC6 3674 aaKnown RBP3.48□□□□□ -1.85
NHLRC2-201ENST00000369301 SPRR2FQ96RM1 72 aa3.46□□□□□ -1.86
NHLRC2-201ENST00000369301 KRTAP3-2Q9BYR7 98 aa3.46□□□□□ -1.86
NHLRC2-201ENST00000369301 BOD1L1Q8NFC6 3051 aa3.43□□□□□ -1.86
NHLRC2-201ENST00000369301 DNHD1Q96M86 4753 aa3.43□□□□□ -1.86
NHLRC2-201ENST00000369301 HRNRQ86YZ3 2850 aaPredicted RBP3.43□□□□□ -1.86
NHLRC2-201ENST00000369301 USP34Q70CQ2 3546 aa3.42□□□□□ -1.86
NHLRC2-201ENST00000369301 KRTAP3-3Q9BYR6 98 aa3.41□□□□□ -1.86
NHLRC2-201ENST00000369301 MT1HL1P0DM35 61 aa3.41□□□□□ -1.86
NHLRC2-201ENST00000369301 DNAH14Q0VDD8 3507 aa3.41□□□□□ -1.86
NHLRC2-201ENST00000369301 DCHS1Q96JQ0 3298 aa3.4□□□□□ -1.86
NHLRC2-201ENST00000369301 KRTAP10-4P60372 401 aaPredicted RBP3.4□□□□□ -1.87
NHLRC2-201ENST00000369301 OTOGQ6ZRI0 2925 aa3.37□□□□□ -1.87
NHLRC2-201ENST00000369301 LOC400499M0QZD8 3231 aa3.36□□□□□ -1.87
NHLRC2-201ENST00000369301 ANK3Q12955 4377 aaKnown RBP3.36□□□□□ -1.87
NHLRC2-201ENST00000369301 FBN1P35555 2871 aaKnown RBP3.36□□□□□ -1.87
NHLRC2-201ENST00000369301 MYO15AQ9UKN7 3530 aa3.34□□□□□ -1.87
NHLRC2-201ENST00000369301 KRTAP12-4P60329 112 aa3.32□□□□□ -1.88
NHLRC2-201ENST00000369301 RELNP78509 3460 aa3.32□□□□□ -1.88
NHLRC2-201ENST00000369301 ZFHX4Q86UP3 3567 aa3.32□□□□□ -1.88
NHLRC2-201ENST00000369301 LCE3CQ5T5A8 94 aa3.31□□□□□ -1.88
NHLRC2-201ENST00000369301 MT3P25713 68 aa3.29□□□□□ -1.88
NHLRC2-201ENST00000369301 SPRR2EP22531 72 aa3.27□□□□□ -1.89
NHLRC2-201ENST00000369301 SPRR2BP35325 72 aa3.27□□□□□ -1.89
NHLRC2-201ENST00000369301 SPRR2AP35326 72 aa3.27□□□□□ -1.89
NHLRC2-201ENST00000369301 ASPMQ8IZT6 3477 aa3.23□□□□□ -1.89
NHLRC2-201ENST00000369301 KRTAP19-5Q3LI72 72 aa3.22□□□□□ -1.89
NHLRC2-201ENST00000369301 SPRR2DP22532 72 aa3.22□□□□□ -1.89
NHLRC2-201ENST00000369301 LCE3BQ5TA77 95 aa3.2□□□□□ -1.9
NHLRC2-201ENST00000369301 LCE2BO14633 110 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms