RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 FAM236BA0A1B0GV22 79 aa13.55□□□□□ -0.24
SNX3-203ENST00000368979 NDUFB1O75438 58 aa13.54□□□□□ -0.24
SNX3-203ENST00000368979 FLG2Q5D862 2391 aaPredicted RBP13.52□□□□□ -0.24
SNX3-203ENST00000368979 A0A1B0GVX0 72 aa13.5□□□□□ -0.25
SNX3-203ENST00000368979 MYCBP2O75592 4640 aa13.49□□□□□ -0.25
SNX3-203ENST00000368979 HCG22E2RYF7 251 aa13.46□□□□□ -0.25
SNX3-203ENST00000368979 IGHV6-1A0A0B4J1U7 121 aa13.45□□□□□ -0.26
SNX3-203ENST00000368979 KRTAP29-1A8MX34 341 aaPredicted RBP13.45□□□□□ -0.26
SNX3-203ENST00000368979 MMP24-AS1A0A0U1RRL7 71 aa13.44□□□□□ -0.26
SNX3-203ENST00000368979 C8orf17Q9NRJ1 99 aa13.42□□□□□ -0.26
SNX3-203ENST00000368979 WFDC13Q8IUB5 93 aa13.39□□□□□ -0.27
SNX3-203ENST00000368979 NOTCH2NLQ7Z3S9 236 aa13.39□□□□□ -0.27
SNX3-203ENST00000368979 ATOX1O00244 68 aa13.38□□□□□ -0.27
SNX3-203ENST00000368979 RETNLBQ9BQ08 111 aa13.38□□□□□ -0.27
SNX3-203ENST00000368979 C8orf87E5RJ46 101 aa13.37□□□□□ -0.27
SNX3-203ENST00000368979 CASC2Q6XLA1 102 aa13.37□□□□□ -0.27
SNX3-203ENST00000368979 hDV103S1A0JD37 113 aa13.34□□□□□ -0.27
SNX3-203ENST00000368979 HERC1Q15751 4861 aa13.3□□□□□ -0.28
SNX3-203ENST00000368979 LINC00313P59037 77 aa13.29□□□□□ -0.28
SNX3-203ENST00000368979 ANAPC13Q9BS18 74 aa13.29□□□□□ -0.28
SNX3-203ENST00000368979 TMEM254Q8TBM7 123 aa13.28□□□□□ -0.28
SNX3-203ENST00000368979 DMBT1Q9UGM3 2413 aaPredicted RBP13.27□□□□□ -0.29
SNX3-203ENST00000368979 FP248Q71RG6 208 aaPredicted RBP13.25□□□□□ -0.29
SNX3-203ENST00000368979 MRPL34Q9BQ48 92 aaKnown RBP13.25□□□□□ -0.29
SNX3-203ENST00000368979 SMIM20Q8N5G0 67 aa13.24□□□□□ -0.29
SNX3-203ENST00000368979 OCR1Q9BZK8 76 aa13.24□□□□□ -0.29
SNX3-203ENST00000368979 KRTAP16-1A8MUX0 517 aa13.23□□□□□ -0.29
SNX3-203ENST00000368979 J3QL48 77 aa13.21□□□□□ -0.29
SNX3-203ENST00000368979 PCP4P48539 62 aa13.2□□□□□ -0.3
SNX3-203ENST00000368979 SERP2Q8N6R1 65 aa13.2□□□□□ -0.3
SNX3-203ENST00000368979 TRAV7A0A075B6U4 112 aa13.19□□□□□ -0.3
SNX3-203ENST00000368979 Q8N9P0 234 aaPredicted RBP13.13□□□□□ -0.31
SNX3-203ENST00000368979 C9orf92A6NGG3 77 aa13.13□□□□□ -0.31
SNX3-203ENST00000368979 COX7CP15954 63 aa13.13□□□□□ -0.31
SNX3-203ENST00000368979 IGLV7-46A0A075B6I9 117 aa13.12□□□□□ -0.31
SNX3-203ENST00000368979 NDUFS5O43920 106 aa13.1□□□□□ -0.31
SNX3-203ENST00000368979 TP53AIP1Q9HCN2 124 aa13.09□□□□□ -0.31
SNX3-203ENST00000368979 UQCRQO14949 82 aa13.08□□□□□ -0.31
SNX3-203ENST00000368979 PRR4Q16378 134 aa13.06□□□□□ -0.32
SNX3-203ENST00000368979 KRTAP13-3Q3SY46 172 aa13.04□□□□□ -0.32
SNX3-203ENST00000368979 CCDC179H3BU77 68 aa13.02□□□□□ -0.33
SNX3-203ENST00000368979 C20orf166-AS1Q96NR2 134 aa13.01□□□□□ -0.33
SNX3-203ENST00000368979 C5orf47Q569G3 176 aa13□□□□□ -0.33
SNX3-203ENST00000368979 A8MUU9 505 aa12.98□□□□□ -0.33
SNX3-203ENST00000368979 TRAV22A0A0B4J277 110 aa12.97□□□□□ -0.33
SNX3-203ENST00000368979 C20orf197Q8N268 126 aa12.95□□□□□ -0.34
SNX3-203ENST00000368979 H0Y9P7 68 aa12.94□□□□□ -0.34
SNX3-203ENST00000368979 TPRXLQ17RH7 258 aa12.94□□□□□ -0.34
SNX3-203ENST00000368979 Q5W150 140 aa12.94□□□□□ -0.34
SNX3-203ENST00000368979 MP68P56378 58 aa12.91□□□□□ -0.34
SNX3-203ENST00000368979 Q75L30 129 aa12.91□□□□□ -0.34
SNX3-203ENST00000368979 A0A0U1RQV1 116 aa12.9□□□□□ -0.34
SNX3-203ENST00000368979 XP32Q5T750 250 aa12.9□□□□□ -0.34
SNX3-203ENST00000368979 KLKP1Q107X0 134 aa12.88□□□□□ -0.35
SNX3-203ENST00000368979 H3BPC8 53 aa12.87□□□□□ -0.35
SNX3-203ENST00000368979 SNURFQ9Y675 71 aa12.87□□□□□ -0.35
SNX3-203ENST00000368979 ZCCHC13Q8WW36 166 aaKnown RBP12.85□□□□□ -0.35
SNX3-203ENST00000368979 LINC00208Q96KT6 92 aa12.84□□□□□ -0.35
SNX3-203ENST00000368979 CYSTM1Q9H1C7 97 aa12.83□□□□□ -0.36
SNX3-203ENST00000368979 RPL37P61927 97 aaKnown RBP12.82□□□□□ -0.36
SNX3-203ENST00000368979 C1orf64Q8NEQ6 169 aa12.81□□□□□ -0.36
SNX3-203ENST00000368979 LOC101927531A0A1B0GV80 90 aa12.74□□□□□ -0.37
SNX3-203ENST00000368979 IGKV2-30P06310 120 aa12.71□□□□□ -0.38
SNX3-203ENST00000368979 LPAP08519 4548 aa12.69□□□□□ -0.38
SNX3-203ENST00000368979 H7BZZ5 65 aa12.69□□□□□ -0.38
SNX3-203ENST00000368979 NDUFC1O43677 76 aa12.69□□□□□ -0.38
SNX3-203ENST00000368979 ATP11AUNQ6ZP68 121 aa12.69□□□□□ -0.38
SNX3-203ENST00000368979 HMCN2Q8NDA2 5059 aa12.69□□□□□ -0.38
SNX3-203ENST00000368979 CYP4F30PQ9H0H9 118 aa12.67□□□□□ -0.38
SNX3-203ENST00000368979 IGKV2D-30A0A075B6S6 120 aa12.62□□□□□ -0.39
SNX3-203ENST00000368979 C7orf65Q6ZTY9 151 aa12.6□□□□□ -0.39
SNX3-203ENST00000368979 PCOTHQ58A44 107 aa12.58□□□□□ -0.4
SNX3-203ENST00000368979 LRP2P98164 4655 aa12.58□□□□□ -0.4
SNX3-203ENST00000368979 UBR4Q5T4S7 5183 aa12.57□□□□□ -0.4
SNX3-203ENST00000368979 TMEM258P61165 79 aa12.54□□□□□ -0.4
SNX3-203ENST00000368979 SPINK7P58062 85 aa12.52□□□□□ -0.4
SNX3-203ENST00000368979 LCE2DQ5TA82 110 aaPredicted RBP12.47□□□□□ -0.41
SNX3-203ENST00000368979 SPANXA2-OT1Q8N9U9 137 aa12.47□□□□□ -0.41
SNX3-203ENST00000368979 HRES1P13985 223 aa12.47□□□□□ -0.41
SNX3-203ENST00000368979 SEC61BP60468 96 aaKnown RBP12.47□□□□□ -0.41
SNX3-203ENST00000368979 FAM236DA0A1B0GTK5 79 aa12.44□□□□□ -0.42
SNX3-203ENST00000368979 FAM236CP0DP71 79 aa12.44□□□□□ -0.42
SNX3-203ENST00000368979 ATP5EP56381 51 aaPredicted RBP12.4□□□□□ -0.42
SNX3-203ENST00000368979 MUC17Q685J3 4493 aa12.36□□□□□ -0.43
SNX3-203ENST00000368979 C4orf26Q17RF5 130 aa12.31□□□□□ -0.44
SNX3-203ENST00000368979 DMAC1Q96GE9 116 aa12.27□□□□□ -0.45
SNX3-203ENST00000368979 KRTAP4-1Q9BYQ7 146 aa12.25□□□□□ -0.45
SNX3-203ENST00000368979 COX6B2Q6YFQ2 88 aa12.2□□□□□ -0.46
SNX3-203ENST00000368979 RNF213Q63HN8 5207 aa12.2□□□□□ -0.46
SNX3-203ENST00000368979 MPLKIPQ8TAP9 179 aa12.19□□□□□ -0.46
SNX3-203ENST00000368979 KRTAP3-1Q9BYR8 98 aa12.17□□□□□ -0.46
SNX3-203ENST00000368979 A8MUN3 132 aa12.16□□□□□ -0.46
SNX3-203ENST00000368979 SERP1Q9Y6X1 66 aa12.15□□□□□ -0.46
SNX3-203ENST00000368979 ACYP2P14621 99 aa12.14□□□□□ -0.47
SNX3-203ENST00000368979 COA5Q86WW8 74 aa12.09□□□□□ -0.47
SNX3-203ENST00000368979 RBM12B-AS1Q9P1G2 102 aa12.07□□□□□ -0.48
SNX3-203ENST00000368979 RPS28P62857 69 aaKnown RBP12.06□□□□□ -0.48
SNX3-203ENST00000368979 H1FX-AS1Q4G0G2 97 aa11.94□□□□□ -0.5
SNX3-203ENST00000368979 CHKB-CPT1BH3BT56 60 aa11.92□□□□□ -0.5
SNX3-203ENST00000368979 KRTAP19-2Q3LHN2 52 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms