RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 CRYBG3Q68DQ2 2970 aa9.62□□□□□ -0.87
SNX27-203ENST00000368843 KALRNO60229 2985 aa9.6□□□□□ -0.87
SNX27-203ENST00000368843 MAP1AP78559 2803 aaPredicted RBP9.59□□□□□ -0.87
SNX27-203ENST00000368843 SPTBN5Q9NRC6 3674 aaKnown RBP9.56□□□□□ -0.88
SNX27-203ENST00000368843 UBR5O95071 2799 aaPredicted RBP9.56□□□□□ -0.88
SNX27-203ENST00000368843 NSD1Q96L73 2696 aaPredicted RBP9.56□□□□□ -0.88
SNX27-203ENST00000368843 LRBAP50851 2863 aa9.54□□□□□ -0.88
SNX27-203ENST00000368843 SPEGQ15772 3267 aa9.53□□□□□ -0.88
SNX27-203ENST00000368843 APCP25054 2843 aa9.52□□□□□ -0.89
SNX27-203ENST00000368843 KRTAP1-4P0C5Y4 121 aa9.52□□□□□ -0.89
SNX27-203ENST00000368843 KRTAP10-10P60014 251 aa9.52□□□□□ -0.89
SNX27-203ENST00000368843 LAMA1P25391 3075 aa9.5□□□□□ -0.89
SNX27-203ENST00000368843 UTP20O75691 2785 aaKnown RBP9.44□□□□□ -0.9
SNX27-203ENST00000368843 TPRXLQ17RH7 258 aa9.44□□□□□ -0.9
SNX27-203ENST00000368843 ITPR1Q14643 2758 aa9.44□□□□□ -0.9
SNX27-203ENST00000368843 USP34Q70CQ2 3546 aa9.43□□□□□ -0.9
SNX27-203ENST00000368843 PP632Q6XCG6 107 aa9.38□□□□□ -0.91
SNX27-203ENST00000368843 DMXL2Q8TDJ6 3036 aa9.36□□□□□ -0.91
SNX27-203ENST00000368843 ATMQ13315 3056 aa9.36□□□□□ -0.91
SNX27-203ENST00000368843 PRO2289Q9P1D8 64 aa9.36□□□□□ -0.91
SNX27-203ENST00000368843 TACC2O95359 2948 aa9.35□□□□□ -0.91
SNX27-203ENST00000368843 FRYLO94915 3013 aa9.35□□□□□ -0.91
SNX27-203ENST00000368843 BOD1L1Q8NFC6 3051 aa9.34□□□□□ -0.91
SNX27-203ENST00000368843 MYO15AQ9UKN7 3530 aa9.34□□□□□ -0.91
SNX27-203ENST00000368843 COL12A1Q99715 3063 aa9.34□□□□□ -0.91
SNX27-203ENST00000368843 HIVEP1P15822 2718 aa9.32□□□□□ -0.92
SNX27-203ENST00000368843 H0YAA0 97 aa9.32□□□□□ -0.92
SNX27-203ENST00000368843 ASH1LQ9NR48 2969 aaKnown RBP9.26□□□□□ -0.93
SNX27-203ENST00000368843 KRTAP13-3Q3SY46 172 aa9.25□□□□□ -0.93
SNX27-203ENST00000368843 ADGRG4Q8IZF6 3080 aa9.23□□□□□ -0.93
SNX27-203ENST00000368843 ASPMQ8IZT6 3477 aa9.22□□□□□ -0.93
SNX27-203ENST00000368843 EYSQ5T1H1 3165 aa9.18□□□□□ -0.94
SNX27-203ENST00000368843 P0C880 135 aa9.14□□□□□ -0.95
SNX27-203ENST00000368843 WDFY3Q8IZQ1 3526 aa9.14□□□□□ -0.95
SNX27-203ENST00000368843 DCHS1Q96JQ0 3298 aa9.12□□□□□ -0.95
SNX27-203ENST00000368843 TENM4Q6N022 2769 aa9.08□□□□□ -0.96
SNX27-203ENST00000368843 ZZEF1O43149 2961 aa9.07□□□□□ -0.96
SNX27-203ENST00000368843 FLNCQ14315 2725 aa9.07□□□□□ -0.96
SNX27-203ENST00000368843 CELSR2Q9HCU4 2923 aa9.04□□□□□ -0.96
SNX27-203ENST00000368843 NBEAQ8NFP9 2946 aa9.04□□□□□ -0.96
SNX27-203ENST00000368843 TNRC18O15417 2968 aaPredicted RBP9.03□□□□□ -0.96
SNX27-203ENST00000368843 LOC400499M0QZD8 3231 aa8.95□□□□□ -0.98
SNX27-203ENST00000368843 DCHS2Q6V1P9 2916 aa8.93□□□□□ -0.98
SNX27-203ENST00000368843 DMXL1Q9Y485 3027 aa8.91□□□□□ -0.98
SNX27-203ENST00000368843 KRTAP12-2P59991 146 aa8.91□□□□□ -0.98
SNX27-203ENST00000368843 ZFHX4Q86UP3 3567 aa8.91□□□□□ -0.98
SNX27-203ENST00000368843 CSMD1Q96PZ7 3565 aa8.87□□□□□ -0.99
SNX27-203ENST00000368843 TENM1Q9UKZ4 2725 aa8.85□□□□□ -0.99
SNX27-203ENST00000368843 NBPF19A0A087WUL8 3843 aa8.84□□□□□ -0.99
SNX27-203ENST00000368843 NIPBLQ6KC79 2804 aaeCLIP8.84□□□□□ -0.99
SNX27-203ENST00000368843 TENM2Q9NT68 2774 aa8.81□□□□□ -1
SNX27-203ENST00000368843 LAMA5O15230 3695 aa8.8□□□□□ -1
SNX27-203ENST00000368843 CELSR1Q9NYQ6 3014 aa8.8□□□□□ -1
SNX27-203ENST00000368843 HRNRQ86YZ3 2850 aaPredicted RBP8.79□□□□□ -1
SNX27-203ENST00000368843 NF1P21359 2839 aa8.72□□□□□ -1.01
SNX27-203ENST00000368843 ZANQ9Y493 2812 aa8.71□□□□□ -1.02
SNX27-203ENST00000368843 RELNP78509 3460 aa8.7□□□□□ -1.02
SNX27-203ENST00000368843 FBN2P35556 2912 aa8.67□□□□□ -1.02
SNX27-203ENST00000368843 KRTAP13-4Q3LI77 160 aa8.66□□□□□ -1.02
SNX27-203ENST00000368843 TGP01266 2768 aa8.62□□□□□ -1.03
SNX27-203ENST00000368843 KRTAP12-1P59990 96 aa8.57□□□□□ -1.04
SNX27-203ENST00000368843 TENM3Q9P273 2699 aa8.55□□□□□ -1.04
SNX27-203ENST00000368843 KRTAP15-1Q3LI76 137 aa8.53□□□□□ -1.04
SNX27-203ENST00000368843 CRCT1Q9UGL9 99 aa8.53□□□□□ -1.04
SNX27-203ENST00000368843 SMG1Q96Q15 3661 aaKnown RBP8.49□□□□□ -1.05
SNX27-203ENST00000368843 KRTAP3-1Q9BYR8 98 aa8.43□□□□□ -1.06
SNX27-203ENST00000368843 DMDP11532 3685 aa8.42□□□□□ -1.06
SNX27-203ENST00000368843 PKD1L1Q8TDX9 2849 aa8.39□□□□□ -1.07
SNX27-203ENST00000368843 SPENQ96T58 3664 aaKnown RBP8.39□□□□□ -1.07
SNX27-203ENST00000368843 SVEP1Q4LDE5 3571 aa8.39□□□□□ -1.07
SNX27-203ENST00000368843 VWFP04275 2813 aa8.34□□□□□ -1.07
SNX27-203ENST00000368843 MXRA5Q9NR99 2828 aa8.34□□□□□ -1.07
SNX27-203ENST00000368843 ANK3Q12955 4377 aaKnown RBP8.26□□□□□ -1.09
SNX27-203ENST00000368843 PDZD2O15018 2839 aa8.23□□□□□ -1.09
SNX27-203ENST00000368843 CUBNO60494 3623 aa8.21□□□□□ -1.09
SNX27-203ENST00000368843 ZFHX3Q15911 3703 aa8.21□□□□□ -1.1
SNX27-203ENST00000368843 KRTAP10-6P60371 365 aaPredicted RBP8.16□□□□□ -1.1
SNX27-203ENST00000368843 MT1HL1P0DM35 61 aa8.14□□□□□ -1.11
SNX27-203ENST00000368843 KRTAP10-12P60413 245 aa8.1□□□□□ -1.11
SNX27-203ENST00000368843 CSMD2Q7Z408 3487 aa8.08□□□□□ -1.12
SNX27-203ENST00000368843 KRTAP4-5Q9BYR2 181 aa8.07□□□□□ -1.12
SNX27-203ENST00000368843 HUWE1Q7Z6Z7 4374 aaKnown RBP7.97□□□□□ -1.13
SNX27-203ENST00000368843 ALMS1Q8TCU4 4167 aa7.94□□□□□ -1.14
SNX27-203ENST00000368843 TRRAPQ9Y4A5 3859 aa7.91□□□□□ -1.14
SNX27-203ENST00000368843 VPS13CQ709C8 3753 aa7.9□□□□□ -1.14
SNX27-203ENST00000368843 FBN1P35555 2871 aaKnown RBP7.89□□□□□ -1.15
SNX27-203ENST00000368843 KRTAP3-3Q9BYR6 98 aa7.88□□□□□ -1.15
SNX27-203ENST00000368843 OTOGQ6ZRI0 2925 aa7.86□□□□□ -1.15
SNX27-203ENST00000368843 MEGF8Q7Z7M0 2845 aa7.85□□□□□ -1.15
SNX27-203ENST00000368843 MUC3AQ02505 3323 aa7.84□□□□□ -1.15
SNX27-203ENST00000368843 KRTAP3-2Q9BYR7 98 aa7.83□□□□□ -1.16
SNX27-203ENST00000368843 FBN3Q75N90 2809 aa7.83□□□□□ -1.16
SNX27-203ENST00000368843 BSNQ9UPA5 3926 aa7.82□□□□□ -1.16
SNX27-203ENST00000368843 CSMD3Q7Z407 3707 aa7.81□□□□□ -1.16
SNX27-203ENST00000368843 KRTAP12-3P60328 96 aa7.79□□□□□ -1.16
SNX27-203ENST00000368843 LCE3AQ5TA76 89 aa7.77□□□□□ -1.17
SNX27-203ENST00000368843 KRTAP10-4P60372 401 aaPredicted RBP7.77□□□□□ -1.17
SNX27-203ENST00000368843 INE1O15225 51 aa7.75□□□□□ -1.17
SNX27-203ENST00000368843 COL7A1Q02388 2944 aa7.72□□□□□ -1.17
SNX27-203ENST00000368843 AKAP9Q99996 3911 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms