RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 KRTAP7-1Q8IUC3 87 aa6.68□□□□□ -1.34
TPR-201ENST00000367478 CRYBG3Q68DQ2 2970 aa6.67□□□□□ -1.34
TPR-201ENST00000367478 COL12A1Q99715 3063 aa6.67□□□□□ -1.34
TPR-201ENST00000367478 NIPBLQ6KC79 2804 aaeCLIP6.67□□□□□ -1.34
TPR-201ENST00000367478 H0YAA0 97 aa6.67□□□□□ -1.34
TPR-201ENST00000367478 CELSR2Q9HCU4 2923 aa6.65□□□□□ -1.34
TPR-201ENST00000367478 REV3LO60673 3130 aa6.63□□□□□ -1.35
TPR-201ENST00000367478 TGP01266 2768 aa6.63□□□□□ -1.35
TPR-201ENST00000367478 UNC80Q8N2C7 3258 aa6.57□□□□□ -1.36
TPR-201ENST00000367478 XP32Q5T750 250 aa6.55□□□□□ -1.36
TPR-201ENST00000367478 TPRXLQ17RH7 258 aa6.54□□□□□ -1.36
TPR-201ENST00000367478 RANBP2P49792 3224 aaKnown RBP6.53□□□□□ -1.36
TPR-201ENST00000367478 MKI67P46013 3256 aaKnown RBP6.52□□□□□ -1.37
TPR-201ENST00000367478 PDZD2O15018 2839 aa6.52□□□□□ -1.37
TPR-201ENST00000367478 CELSR3Q9NYQ7 3312 aa6.51□□□□□ -1.37
TPR-201ENST00000367478 LAMA1P25391 3075 aa6.51□□□□□ -1.37
TPR-201ENST00000367478 XIRP2A4UGR9 3374 aa6.5□□□□□ -1.37
TPR-201ENST00000367478 TACC2O95359 2948 aa6.47□□□□□ -1.37
TPR-201ENST00000367478 TENM4Q6N022 2769 aa6.47□□□□□ -1.37
TPR-201ENST00000367478 DCHS2Q6V1P9 2916 aa6.47□□□□□ -1.37
TPR-201ENST00000367478 KRTAP10-10P60014 251 aa6.46□□□□□ -1.37
TPR-201ENST00000367478 ZZEF1O43149 2961 aa6.45□□□□□ -1.38
TPR-201ENST00000367478 NBEAQ8NFP9 2946 aa6.44□□□□□ -1.38
TPR-201ENST00000367478 KRTAP21-3Q3LHN1 58 aa6.44□□□□□ -1.38
TPR-201ENST00000367478 TNRC18O15417 2968 aaPredicted RBP6.44□□□□□ -1.38
TPR-201ENST00000367478 BOD1L1Q8NFC6 3051 aa6.42□□□□□ -1.38
TPR-201ENST00000367478 KRTAP1-4P0C5Y4 121 aa6.39□□□□□ -1.39
TPR-201ENST00000367478 A0A1B0GVY2 172 aa6.39□□□□□ -1.39
TPR-201ENST00000367478 HTTP42858 3142 aa6.35□□□□□ -1.39
TPR-201ENST00000367478 LAMA3Q16787 3333 aa6.34□□□□□ -1.39
TPR-201ENST00000367478 ADGRG4Q8IZF6 3080 aa6.32□□□□□ -1.4
TPR-201ENST00000367478 KRTAP13-4Q3LI77 160 aa6.32□□□□□ -1.4
TPR-201ENST00000367478 CELSR1Q9NYQ6 3014 aa6.31□□□□□ -1.4
TPR-201ENST00000367478 ATMQ13315 3056 aa6.31□□□□□ -1.4
TPR-201ENST00000367478 COL6A3P12111 3177 aa6.3□□□□□ -1.4
TPR-201ENST00000367478 KRTAP13-3Q3SY46 172 aa6.28□□□□□ -1.4
TPR-201ENST00000367478 DMXL1Q9Y485 3027 aa6.26□□□□□ -1.41
TPR-201ENST00000367478 ZANQ9Y493 2812 aa6.25□□□□□ -1.41
TPR-201ENST00000367478 USP34Q70CQ2 3546 aa6.23□□□□□ -1.41
TPR-201ENST00000367478 KRTAP12-2P59991 146 aa6.22□□□□□ -1.41
TPR-201ENST00000367478 FBN2P35556 2912 aa6.22□□□□□ -1.41
TPR-201ENST00000367478 PKD1L1Q8TDX9 2849 aa6.2□□□□□ -1.42
TPR-201ENST00000367478 CFAP47Q6ZTR5 3102 aa6.2□□□□□ -1.42
TPR-201ENST00000367478 INE1O15225 51 aa6.19□□□□□ -1.42
TPR-201ENST00000367478 VWFP04275 2813 aa6.19□□□□□ -1.42
TPR-201ENST00000367478 SRRM2Q9UQ35 2752 aaKnown RBP6.16□□□□□ -1.42
TPR-201ENST00000367478 BRCA2P51587 3418 aa6.14□□□□□ -1.43
TPR-201ENST00000367478 DNAH14Q0VDD8 3507 aa6.14□□□□□ -1.43
TPR-201ENST00000367478 VCANP13611 3396 aa6.12□□□□□ -1.43
TPR-201ENST00000367478 KRTAP12-1P59990 96 aa6.1□□□□□ -1.43
TPR-201ENST00000367478 TENM2Q9NT68 2774 aa6.1□□□□□ -1.43
TPR-201ENST00000367478 KRTAP15-1Q3LI76 137 aa6.09□□□□□ -1.44
TPR-201ENST00000367478 SPEGQ15772 3267 aa6.08□□□□□ -1.44
TPR-201ENST00000367478 MXRA5Q9NR99 2828 aa6.06□□□□□ -1.44
TPR-201ENST00000367478 CDH23Q9H251 3354 aa6.02□□□□□ -1.45
TPR-201ENST00000367478 HRNRQ86YZ3 2850 aaPredicted RBP6□□□□□ -1.45
TPR-201ENST00000367478 COL7A1Q02388 2944 aa5.99□□□□□ -1.45
TPR-201ENST00000367478 MEGF8Q7Z7M0 2845 aa5.9□□□□□ -1.47
TPR-201ENST00000367478 ZFHX4Q86UP3 3567 aa5.87□□□□□ -1.47
TPR-201ENST00000367478 EYSQ5T1H1 3165 aa5.84□□□□□ -1.48
TPR-201ENST00000367478 FBN3Q75N90 2809 aa5.74□□□□□ -1.49
TPR-201ENST00000367478 KRTAP3-1Q9BYR8 98 aa5.74□□□□□ -1.49
TPR-201ENST00000367478 KRTAP10-6P60371 365 aaPredicted RBP5.73□□□□□ -1.49
TPR-201ENST00000367478 MYO15AQ9UKN7 3530 aa5.72□□□□□ -1.49
TPR-201ENST00000367478 KRTAP23-1A1A580 65 aa5.72□□□□□ -1.49
TPR-201ENST00000367478 SZT2Q5T011 3432 aa5.72□□□□□ -1.49
TPR-201ENST00000367478 NBPF19A0A087WUL8 3843 aa5.71□□□□□ -1.49
TPR-201ENST00000367478 KRTAP10-12P60413 245 aa5.71□□□□□ -1.5
TPR-201ENST00000367478 WDFY3Q8IZQ1 3526 aa5.67□□□□□ -1.5
TPR-201ENST00000367478 LOC400499M0QZD8 3231 aa5.64□□□□□ -1.51
TPR-201ENST00000367478 SPTBN5Q9NRC6 3674 aaKnown RBP5.57□□□□□ -1.52
TPR-201ENST00000367478 FBN1P35555 2871 aaKnown RBP5.57□□□□□ -1.52
TPR-201ENST00000367478 KRTAP12-3P60328 96 aa5.54□□□□□ -1.52
TPR-201ENST00000367478 ZFHX3Q15911 3703 aa5.53□□□□□ -1.52
TPR-201ENST00000367478 ASPMQ8IZT6 3477 aa5.5□□□□□ -1.53
TPR-201ENST00000367478 CRCT1Q9UGL9 99 aa5.5□□□□□ -1.53
TPR-201ENST00000367478 DCHS1Q96JQ0 3298 aa5.49□□□□□ -1.53
TPR-201ENST00000367478 KRTAP3-2Q9BYR7 98 aa5.43□□□□□ -1.54
TPR-201ENST00000367478 LAMA5O15230 3695 aa5.42□□□□□ -1.54
TPR-201ENST00000367478 OTOGQ6ZRI0 2925 aa5.41□□□□□ -1.54
TPR-201ENST00000367478 RELNP78509 3460 aa5.4□□□□□ -1.55
TPR-201ENST00000367478 KRTAP3-3Q9BYR6 98 aa5.39□□□□□ -1.55
TPR-201ENST00000367478 CSMD1Q96PZ7 3565 aa5.33□□□□□ -1.56
TPR-201ENST00000367478 SPENQ96T58 3664 aaKnown RBP5.32□□□□□ -1.56
TPR-201ENST00000367478 SMG1Q96Q15 3661 aaKnown RBP5.32□□□□□ -1.56
TPR-201ENST00000367478 LCE3AQ5TA76 89 aa5.3□□□□□ -1.56
TPR-201ENST00000367478 KRTAP10-5P60370 271 aa5.3□□□□□ -1.56
TPR-201ENST00000367478 TRRAPQ9Y4A5 3859 aa5.26□□□□□ -1.57
TPR-201ENST00000367478 DMDP11532 3685 aa5.23□□□□□ -1.57
TPR-201ENST00000367478 MT1HL1P0DM35 61 aa5.22□□□□□ -1.57
TPR-201ENST00000367478 KRTAP8-1Q8IUC2 63 aa5.17□□□□□ -1.58
TPR-201ENST00000367478 MUC3AQ02505 3323 aa5.1□□□□□ -1.59
TPR-201ENST00000367478 CUBNO60494 3623 aa5.06□□□□□ -1.6
TPR-201ENST00000367478 VPS13CQ709C8 3753 aa5.05□□□□□ -1.6
TPR-201ENST00000367478 KRTAP19-4Q3LI73 84 aa5.02□□□□□ -1.61
TPR-201ENST00000367478 CSMD3Q7Z407 3707 aa4.98□□□□□ -1.61
TPR-201ENST00000367478 SVEP1Q4LDE5 3571 aa4.98□□□□□ -1.61
TPR-201ENST00000367478 AKAP9Q99996 3911 aa4.95□□□□□ -1.62
TPR-201ENST00000367478 KRTAP10-4P60372 401 aaPredicted RBP4.94□□□□□ -1.62
TPR-201ENST00000367478 ALMS1Q8TCU4 4167 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms