RNA–Protein interactions for RNA: ENST00000367338.7

CACNA1S-202, Transcript of calcium voltage-gated channel subunit alpha1 S, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1S, Length 5,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1S-202ENST00000367338 M0QZ58 72 aa5.66□□□□□ -1.5
CACNA1S-202ENST00000367338 A6NN06 94 aa5.64□□□□□ -1.51
CACNA1S-202ENST00000367338 ITPR2Q14571 2701 aa5.62□□□□□ -1.51
CACNA1S-202ENST00000367338 A0A087X002 238 aa5.61□□□□□ -1.51
CACNA1S-202ENST00000367338 NOTCH2NLQ7Z3S9 236 aa5.61□□□□□ -1.51
CACNA1S-202ENST00000367338 ZFHX4Q86UP3 3567 aa5.6□□□□□ -1.51
CACNA1S-202ENST00000367338 ADM2Q7Z4H4 148 aa5.59□□□□□ -1.51
CACNA1S-202ENST00000367338 A8MU10 97 aa5.58□□□□□ -1.52
CACNA1S-202ENST00000367338 SPATA8Q6RVD6 105 aa5.58□□□□□ -1.52
CACNA1S-202ENST00000367338 ZANQ9Y493 2812 aa5.58□□□□□ -1.52
CACNA1S-202ENST00000367338 FLG2Q5D862 2391 aaPredicted RBP5.58□□□□□ -1.52
CACNA1S-202ENST00000367338 ASPMQ8IZT6 3477 aa5.56□□□□□ -1.52
CACNA1S-202ENST00000367338 FBN2P35556 2912 aa5.55□□□□□ -1.52
CACNA1S-202ENST00000367338 NSD1Q96L73 2696 aaPredicted RBP5.55□□□□□ -1.52
CACNA1S-202ENST00000367338 BSNQ9UPA5 3926 aa5.55□□□□□ -1.52
CACNA1S-202ENST00000367338 CFAP47Q6ZTR5 3102 aa5.54□□□□□ -1.52
CACNA1S-202ENST00000367338 KRTAP13-2Q52LG2 175 aa5.54□□□□□ -1.52
CACNA1S-202ENST00000367338 RELNP78509 3460 aa5.54□□□□□ -1.52
CACNA1S-202ENST00000367338 LAMA5O15230 3695 aa5.54□□□□□ -1.52
CACNA1S-202ENST00000367338 HIVEP1P15822 2718 aa5.53□□□□□ -1.52
CACNA1S-202ENST00000367338 SMG1Q96Q15 3661 aaKnown RBP5.53□□□□□ -1.52
CACNA1S-202ENST00000367338 C20orf166-AS1Q96NR2 134 aa5.52□□□□□ -1.53
CACNA1S-202ENST00000367338 COL6A5A8TX70 2615 aa5.52□□□□□ -1.53
CACNA1S-202ENST00000367338 DCHS2Q6V1P9 2916 aa5.51□□□□□ -1.53
CACNA1S-202ENST00000367338 NOTCH1P46531 2555 aa5.49□□□□□ -1.53
CACNA1S-202ENST00000367338 STAB1Q9NY15 2570 aa5.49□□□□□ -1.53
CACNA1S-202ENST00000367338 MUC3AQ02505 3323 aa5.48□□□□□ -1.53
CACNA1S-202ENST00000367338 KRTAP16-1A8MUX0 517 aa5.48□□□□□ -1.53
CACNA1S-202ENST00000367338 CELSR2Q9HCU4 2923 aa5.47□□□□□ -1.53
CACNA1S-202ENST00000367338 KRTAP21-3Q3LHN1 58 aa5.47□□□□□ -1.53
CACNA1S-202ENST00000367338 MXRA5Q9NR99 2828 aa5.47□□□□□ -1.53
CACNA1S-202ENST00000367338 NIPBLQ6KC79 2804 aaeCLIP5.46□□□□□ -1.54
CACNA1S-202ENST00000367338 KRTAP25-1Q3LHN0 102 aa5.46□□□□□ -1.54
CACNA1S-202ENST00000367338 ANK3Q12955 4377 aaKnown RBP5.45□□□□□ -1.54
CACNA1S-202ENST00000367338 DCHS1Q96JQ0 3298 aa5.45□□□□□ -1.54
CACNA1S-202ENST00000367338 PDZD2O15018 2839 aa5.44□□□□□ -1.54
CACNA1S-202ENST00000367338 CRYBG3Q68DQ2 2970 aa5.44□□□□□ -1.54
CACNA1S-202ENST00000367338 A8MUU9 505 aa5.43□□□□□ -1.54
CACNA1S-202ENST00000367338 CSMD1Q96PZ7 3565 aa5.43□□□□□ -1.54
CACNA1S-202ENST00000367338 KRTAP1-4P0C5Y4 121 aa5.39□□□□□ -1.55
CACNA1S-202ENST00000367338 SPENQ96T58 3664 aaKnown RBP5.37□□□□□ -1.55
CACNA1S-202ENST00000367338 NBEAL1Q6ZS30 2694 aa5.37□□□□□ -1.55
CACNA1S-202ENST00000367338 NF1P21359 2839 aa5.36□□□□□ -1.55
CACNA1S-202ENST00000367338 BAHCC1Q9P281 2608 aa5.36□□□□□ -1.55
CACNA1S-202ENST00000367338 ASH1LQ9NR48 2969 aaKnown RBP5.35□□□□□ -1.55
CACNA1S-202ENST00000367338 NDUFAF8A1L188 74 aa5.34□□□□□ -1.55
CACNA1S-202ENST00000367338 TNP1P09430 55 aa5.34□□□□□ -1.55
CACNA1S-202ENST00000367338 CELSR1Q9NYQ6 3014 aa5.31□□□□□ -1.56
CACNA1S-202ENST00000367338 PP632Q6XCG6 107 aa5.3□□□□□ -1.56
CACNA1S-202ENST00000367338 P0C880 135 aa5.29□□□□□ -1.56
CACNA1S-202ENST00000367338 TENM4Q6N022 2769 aa5.28□□□□□ -1.56
CACNA1S-202ENST00000367338 KRTAP13-3Q3SY46 172 aa5.27□□□□□ -1.56
CACNA1S-202ENST00000367338 SVEP1Q4LDE5 3571 aa5.27□□□□□ -1.57
CACNA1S-202ENST00000367338 C10orf95Q9H7T3 257 aa5.27□□□□□ -1.57
CACNA1S-202ENST00000367338 NBPF19A0A087WUL8 3843 aa5.22□□□□□ -1.57
CACNA1S-202ENST00000367338 TENM3Q9P273 2699 aa5.21□□□□□ -1.58
CACNA1S-202ENST00000367338 STAB2Q8WWQ8 2551 aa5.2□□□□□ -1.58
CACNA1S-202ENST00000367338 OTOGQ6ZRI0 2925 aa5.19□□□□□ -1.58
CACNA1S-202ENST00000367338 DMBT1Q9UGM3 2413 aaPredicted RBP5.17□□□□□ -1.58
CACNA1S-202ENST00000367338 TENM1Q9UKZ4 2725 aa5.15□□□□□ -1.58
CACNA1S-202ENST00000367338 KRTAP10-8P60410 259 aa5.13□□□□□ -1.59
CACNA1S-202ENST00000367338 A0A1B0GVY2 172 aa5.12□□□□□ -1.59
CACNA1S-202ENST00000367338 XP32Q5T750 250 aa5.12□□□□□ -1.59
CACNA1S-202ENST00000367338 AKAP9Q99996 3911 aa5.1□□□□□ -1.59
CACNA1S-202ENST00000367338 CSMD2Q7Z408 3487 aa5.1□□□□□ -1.59
CACNA1S-202ENST00000367338 TPRXLQ17RH7 258 aa5.09□□□□□ -1.59
CACNA1S-202ENST00000367338 VWFP04275 2813 aa5.09□□□□□ -1.59
CACNA1S-202ENST00000367338 H0YAA0 97 aa5.08□□□□□ -1.6
CACNA1S-202ENST00000367338 HUWE1Q7Z6Z7 4374 aaKnown RBP5.08□□□□□ -1.6
CACNA1S-202ENST00000367338 VPS13CQ709C8 3753 aa5.05□□□□□ -1.6
CACNA1S-202ENST00000367338 PRO2289Q9P1D8 64 aa5.05□□□□□ -1.6
CACNA1S-202ENST00000367338 FBN1P35555 2871 aaKnown RBP5.01□□□□□ -1.61
CACNA1S-202ENST00000367338 TRRAPQ9Y4A5 3859 aa5.01□□□□□ -1.61
CACNA1S-202ENST00000367338 ZFHX3Q15911 3703 aa5□□□□□ -1.61
CACNA1S-202ENST00000367338 ZNF469Q96JG9 3925 aaPredicted RBP4.95□□□□□ -1.62
CACNA1S-202ENST00000367338 KRTAP10-10P60014 251 aa4.92□□□□□ -1.62
CACNA1S-202ENST00000367338 KRTAP3-1Q9BYR8 98 aa4.9□□□□□ -1.62
CACNA1S-202ENST00000367338 ALMS1Q8TCU4 4167 aa4.89□□□□□ -1.63
CACNA1S-202ENST00000367338 TENM2Q9NT68 2774 aa4.87□□□□□ -1.63
CACNA1S-202ENST00000367338 DNAH9Q9NYC9 4486 aa4.87□□□□□ -1.63
CACNA1S-202ENST00000367338 TGP01266 2768 aa4.87□□□□□ -1.63
CACNA1S-202ENST00000367338 PKD1L1Q8TDX9 2849 aa4.86□□□□□ -1.63
CACNA1S-202ENST00000367338 CUBNO60494 3623 aa4.85□□□□□ -1.63
CACNA1S-202ENST00000367338 KRTAP10-4P60372 401 aaPredicted RBP4.79□□□□□ -1.64
CACNA1S-202ENST00000367338 KRTAP13-4Q3LI77 160 aa4.76□□□□□ -1.65
CACNA1S-202ENST00000367338 DNAH3Q8TD57 4116 aa4.75□□□□□ -1.65
CACNA1S-202ENST00000367338 DNAH1Q9P2D7 4330 aa4.74□□□□□ -1.65
CACNA1S-202ENST00000367338 KRTAP12-2P59991 146 aa4.74□□□□□ -1.65
CACNA1S-202ENST00000367338 KRTAP10-6P60371 365 aaPredicted RBP4.73□□□□□ -1.65
CACNA1S-202ENST00000367338 VPS13DQ5THJ4 4388 aa4.73□□□□□ -1.65
CACNA1S-202ENST00000367338 MEGF8Q7Z7M0 2845 aa4.72□□□□□ -1.65
CACNA1S-202ENST00000367338 DNAH17Q9UFH2 4485 aa4.71□□□□□ -1.65
CACNA1S-202ENST00000367338 KRTAP12-1P59990 96 aa4.7□□□□□ -1.66
CACNA1S-202ENST00000367338 PLECQ15149 4684 aaKnown RBP4.7□□□□□ -1.66
CACNA1S-202ENST00000367338 DNAH10Q8IVF4 4471 aa4.7□□□□□ -1.66
CACNA1S-202ENST00000367338 MT1HL1P0DM35 61 aa4.67□□□□□ -1.66
CACNA1S-202ENST00000367338 FBN3Q75N90 2809 aa4.66□□□□□ -1.66
CACNA1S-202ENST00000367338 KRTAP3-3Q9BYR6 98 aa4.65□□□□□ -1.66
CACNA1S-202ENST00000367338 SRRM2Q9UQ35 2752 aaKnown RBP4.65□□□□□ -1.67
CACNA1S-202ENST00000367338 DYNC2H1Q8NCM8 4307 aaKnown RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms