RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 WDFY4Q6ZS81 3184 aa5.02□□□□□ -1.61
SYNE1-205ENST00000367251 H3BS24 57 aa5.01□□□□□ -1.61
SYNE1-205ENST00000367251 KRTAP21-3Q3LHN1 58 aa5.01□□□□□ -1.61
SYNE1-205ENST00000367251 ZFHX3Q15911 3703 aa5□□□□□ -1.61
SYNE1-205ENST00000367251 KRTAP25-1Q3LHN0 102 aa5□□□□□ -1.61
SYNE1-205ENST00000367251 CELSR3Q9NYQ7 3312 aa5□□□□□ -1.61
SYNE1-205ENST00000367251 CFAP47Q6ZTR5 3102 aa5□□□□□ -1.61
SYNE1-205ENST00000367251 NSD1Q96L73 2696 aaPredicted RBP5□□□□□ -1.61
SYNE1-205ENST00000367251 MAP1AP78559 2803 aaPredicted RBP4.99□□□□□ -1.61
SYNE1-205ENST00000367251 FLNCQ14315 2725 aa4.99□□□□□ -1.61
SYNE1-205ENST00000367251 A0A1B0GVY2 172 aa4.96□□□□□ -1.62
SYNE1-205ENST00000367251 C10orf95Q9H7T3 257 aa4.96□□□□□ -1.62
SYNE1-205ENST00000367251 P0C880 135 aa4.93□□□□□ -1.62
SYNE1-205ENST00000367251 KRTAP10-10P60014 251 aa4.93□□□□□ -1.62
SYNE1-205ENST00000367251 LOC400499M0QZD8 3231 aa4.92□□□□□ -1.62
SYNE1-205ENST00000367251 RELNP78509 3460 aa4.92□□□□□ -1.62
SYNE1-205ENST00000367251 A8MU10 97 aa4.91□□□□□ -1.62
SYNE1-205ENST00000367251 KRTAP16-1A8MUX0 517 aa4.9□□□□□ -1.62
SYNE1-205ENST00000367251 LAMA5O15230 3695 aa4.9□□□□□ -1.62
SYNE1-205ENST00000367251 PRO2289Q9P1D8 64 aa4.9□□□□□ -1.62
SYNE1-205ENST00000367251 UTP20O75691 2785 aaKnown RBP4.9□□□□□ -1.63
SYNE1-205ENST00000367251 UBR5O95071 2799 aaPredicted RBP4.89□□□□□ -1.63
SYNE1-205ENST00000367251 KRTAP1-4P0C5Y4 121 aa4.89□□□□□ -1.63
SYNE1-205ENST00000367251 NBEAL2Q6ZNJ1 2754 aa4.89□□□□□ -1.63
SYNE1-205ENST00000367251 DSPP15924 2871 aaKnown RBP4.88□□□□□ -1.63
SYNE1-205ENST00000367251 TENM4Q6N022 2769 aa4.88□□□□□ -1.63
SYNE1-205ENST00000367251 FRYQ5TBA9 3013 aa4.88□□□□□ -1.63
SYNE1-205ENST00000367251 ITPR2Q14571 2701 aa4.86□□□□□ -1.63
SYNE1-205ENST00000367251 SMG1Q96Q15 3661 aaKnown RBP4.86□□□□□ -1.63
SYNE1-205ENST00000367251 BOD1L1Q8NFC6 3051 aa4.82□□□□□ -1.64
SYNE1-205ENST00000367251 DCHS1Q96JQ0 3298 aa4.82□□□□□ -1.64
SYNE1-205ENST00000367251 ITPR1Q14643 2758 aa4.8□□□□□ -1.64
SYNE1-205ENST00000367251 VPS13CQ709C8 3753 aa4.79□□□□□ -1.64
SYNE1-205ENST00000367251 NDUFAF8A1L188 74 aa4.77□□□□□ -1.65
SYNE1-205ENST00000367251 XP32Q5T750 250 aa4.77□□□□□ -1.65
SYNE1-205ENST00000367251 HIVEP1P15822 2718 aa4.76□□□□□ -1.65
SYNE1-205ENST00000367251 DMXL1Q9Y485 3027 aa4.76□□□□□ -1.65
SYNE1-205ENST00000367251 PP632Q6XCG6 107 aa4.75□□□□□ -1.65
SYNE1-205ENST00000367251 KALRNO60229 2985 aa4.75□□□□□ -1.65
SYNE1-205ENST00000367251 KRTAP13-3Q3SY46 172 aa4.75□□□□□ -1.65
SYNE1-205ENST00000367251 TENM3Q9P273 2699 aa4.75□□□□□ -1.65
SYNE1-205ENST00000367251 LRBAP50851 2863 aa4.74□□□□□ -1.65
SYNE1-205ENST00000367251 NBPF19A0A087WUL8 3843 aa4.74□□□□□ -1.65
SYNE1-205ENST00000367251 H0YAA0 97 aa4.73□□□□□ -1.65
SYNE1-205ENST00000367251 TPRXLQ17RH7 258 aa4.72□□□□□ -1.65
SYNE1-205ENST00000367251 APCP25054 2843 aa4.72□□□□□ -1.65
SYNE1-205ENST00000367251 HRNRQ86YZ3 2850 aaPredicted RBP4.71□□□□□ -1.66
SYNE1-205ENST00000367251 ATMQ13315 3056 aa4.7□□□□□ -1.66
SYNE1-205ENST00000367251 ADGRG4Q8IZF6 3080 aa4.68□□□□□ -1.66
SYNE1-205ENST00000367251 NIPBLQ6KC79 2804 aaeCLIP4.68□□□□□ -1.66
SYNE1-205ENST00000367251 NBEAQ8NFP9 2946 aa4.67□□□□□ -1.66
SYNE1-205ENST00000367251 ZZEF1O43149 2961 aa4.66□□□□□ -1.66
SYNE1-205ENST00000367251 CRYBG3Q68DQ2 2970 aa4.64□□□□□ -1.67
SYNE1-205ENST00000367251 COL12A1Q99715 3063 aa4.62□□□□□ -1.67
SYNE1-205ENST00000367251 DMXL2Q8TDJ6 3036 aa4.62□□□□□ -1.67
SYNE1-205ENST00000367251 CSMD1Q96PZ7 3565 aa4.6□□□□□ -1.67
SYNE1-205ENST00000367251 TENM2Q9NT68 2774 aa4.6□□□□□ -1.67
SYNE1-205ENST00000367251 AKAP9Q99996 3911 aa4.59□□□□□ -1.67
SYNE1-205ENST00000367251 CSMD2Q7Z408 3487 aa4.58□□□□□ -1.68
SYNE1-205ENST00000367251 SVEP1Q4LDE5 3571 aa4.58□□□□□ -1.68
SYNE1-205ENST00000367251 TACC2O95359 2948 aa4.55□□□□□ -1.68
SYNE1-205ENST00000367251 TENM1Q9UKZ4 2725 aa4.55□□□□□ -1.68
SYNE1-205ENST00000367251 DCHS2Q6V1P9 2916 aa4.54□□□□□ -1.68
SYNE1-205ENST00000367251 ZANQ9Y493 2812 aa4.52□□□□□ -1.69
SYNE1-205ENST00000367251 CUBNO60494 3623 aa4.48□□□□□ -1.69
SYNE1-205ENST00000367251 CELSR2Q9HCU4 2923 aa4.46□□□□□ -1.7
SYNE1-205ENST00000367251 ZNF469Q96JG9 3925 aaPredicted RBP4.46□□□□□ -1.7
SYNE1-205ENST00000367251 ASH1LQ9NR48 2969 aaKnown RBP4.45□□□□□ -1.7
SYNE1-205ENST00000367251 NF1P21359 2839 aa4.45□□□□□ -1.7
SYNE1-205ENST00000367251 KRTAP3-1Q9BYR8 98 aa4.43□□□□□ -1.7
SYNE1-205ENST00000367251 KRTAP12-2P59991 146 aa4.41□□□□□ -1.7
SYNE1-205ENST00000367251 FBN2P35556 2912 aa4.41□□□□□ -1.7
SYNE1-205ENST00000367251 PDZD2O15018 2839 aa4.4□□□□□ -1.7
SYNE1-205ENST00000367251 KRTAP13-4Q3LI77 160 aa4.38□□□□□ -1.71
SYNE1-205ENST00000367251 MXRA5Q9NR99 2828 aa4.38□□□□□ -1.71
SYNE1-205ENST00000367251 KRTAP12-1P59990 96 aa4.38□□□□□ -1.71
SYNE1-205ENST00000367251 CELSR1Q9NYQ6 3014 aa4.37□□□□□ -1.71
SYNE1-205ENST00000367251 PKD1L1Q8TDX9 2849 aa4.37□□□□□ -1.71
SYNE1-205ENST00000367251 CRCT1Q9UGL9 99 aa4.35□□□□□ -1.71
SYNE1-205ENST00000367251 FBN3Q75N90 2809 aa4.35□□□□□ -1.71
SYNE1-205ENST00000367251 SRRM2Q9UQ35 2752 aaKnown RBP4.33□□□□□ -1.72
SYNE1-205ENST00000367251 KRTAP15-1Q3LI76 137 aa4.32□□□□□ -1.72
SYNE1-205ENST00000367251 ANK3Q12955 4377 aaKnown RBP4.32□□□□□ -1.72
SYNE1-205ENST00000367251 TGP01266 2768 aa4.32□□□□□ -1.72
SYNE1-205ENST00000367251 KRTAP10-6P60371 365 aaPredicted RBP4.31□□□□□ -1.72
SYNE1-205ENST00000367251 VWFP04275 2813 aa4.27□□□□□ -1.73
SYNE1-205ENST00000367251 ANK2Q01484 3957 aa4.23□□□□□ -1.73
SYNE1-205ENST00000367251 CSMD3Q7Z407 3707 aa4.23□□□□□ -1.73
SYNE1-205ENST00000367251 KRTAP3-2Q9BYR7 98 aa4.18□□□□□ -1.74
SYNE1-205ENST00000367251 CMYA5Q8N3K9 4069 aa4.18□□□□□ -1.74
SYNE1-205ENST00000367251 KRTAP10-4P60372 401 aaPredicted RBP4.17□□□□□ -1.74
SYNE1-205ENST00000367251 KRTAP3-3Q9BYR6 98 aa4.17□□□□□ -1.74
SYNE1-205ENST00000367251 MT1HL1P0DM35 61 aa4.17□□□□□ -1.74
SYNE1-205ENST00000367251 OTOGQ6ZRI0 2925 aa4.16□□□□□ -1.74
SYNE1-205ENST00000367251 TRRAPQ9Y4A5 3859 aa4.15□□□□□ -1.75
SYNE1-205ENST00000367251 ALMS1Q8TCU4 4167 aa4.09□□□□□ -1.75
SYNE1-205ENST00000367251 HUWE1Q7Z6Z7 4374 aaKnown RBP4.09□□□□□ -1.75
SYNE1-205ENST00000367251 KRTAP23-1A1A580 65 aa4.09□□□□□ -1.76
SYNE1-205ENST00000367251 LYSTQ99698 3801 aa4.08□□□□□ -1.76
SYNE1-205ENST00000367251 DNAH3Q8TD57 4116 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms