RNA–Protein interactions for RNA: ENST00000362006.11

CCDC7-203, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-203ENST00000362006 PRR15Q8IV56 129 aa10.19□□□□□ -0.78
CCDC7-203ENST00000362006 K7EQZ3 153 aa10.18□□□□□ -0.78
CCDC7-203ENST00000362006 Q8N9L7 120 aa10.16□□□□□ -0.78
CCDC7-203ENST00000362006 A0A1B0GVX0 72 aa10.16□□□□□ -0.78
CCDC7-203ENST00000362006 FP248Q71RG6 208 aaPredicted RBP10.13□□□□□ -0.79
CCDC7-203ENST00000362006 RETNLBQ9BQ08 111 aa10.12□□□□□ -0.79
CCDC7-203ENST00000362006 IGHV6-1A0A0B4J1U7 121 aa10.11□□□□□ -0.79
CCDC7-203ENST00000362006 C8orf87E5RJ46 101 aa10.1□□□□□ -0.79
CCDC7-203ENST00000362006 A0A087WVE0 104 aa10.09□□□□□ -0.79
CCDC7-203ENST00000362006 C8orf17Q9NRJ1 99 aa10.07□□□□□ -0.8
CCDC7-203ENST00000362006 HCG22E2RYF7 251 aa10.07□□□□□ -0.8
CCDC7-203ENST00000362006 LINC00313P59037 77 aa10.06□□□□□ -0.8
CCDC7-203ENST00000362006 MMP24-AS1A0A0U1RRL7 71 aa10.04□□□□□ -0.8
CCDC7-203ENST00000362006 CASC2Q6XLA1 102 aa10.02□□□□□ -0.81
CCDC7-203ENST00000362006 IGLV7-46A0A075B6I9 117 aa10.01□□□□□ -0.81
CCDC7-203ENST00000362006 hDV103S1A0JD37 113 aa10.01□□□□□ -0.81
CCDC7-203ENST00000362006 NOTCH2NLQ7Z3S9 236 aa10□□□□□ -0.81
CCDC7-203ENST00000362006 WFDC13Q8IUB5 93 aa10□□□□□ -0.81
CCDC7-203ENST00000362006 FAM236AA0A1B0GUQ0 79 aa10□□□□□ -0.81
CCDC7-203ENST00000362006 FAM236BA0A1B0GV22 79 aa10□□□□□ -0.81
CCDC7-203ENST00000362006 PRR4Q16378 134 aa9.99□□□□□ -0.81
CCDC7-203ENST00000362006 TMEM254Q8TBM7 123 aa9.99□□□□□ -0.81
CCDC7-203ENST00000362006 MRPL34Q9BQ48 92 aaKnown RBP9.95□□□□□ -0.82
CCDC7-203ENST00000362006 PCLOQ9Y6V0 5065 aa9.94□□□□□ -0.82
CCDC7-203ENST00000362006 C9orf92A6NGG3 77 aa9.92□□□□□ -0.82
CCDC7-203ENST00000362006 KRTAP16-1A8MUX0 517 aa9.92□□□□□ -0.82
CCDC7-203ENST00000362006 ATOX1O00244 68 aa9.92□□□□□ -0.82
CCDC7-203ENST00000362006 KRTAP13-3Q3SY46 172 aa9.91□□□□□ -0.82
CCDC7-203ENST00000362006 SMIM20Q8N5G0 67 aa9.89□□□□□ -0.83
CCDC7-203ENST00000362006 TPRXLQ17RH7 258 aa9.89□□□□□ -0.83
CCDC7-203ENST00000362006 Q8N9P0 234 aaPredicted RBP9.88□□□□□ -0.83
CCDC7-203ENST00000362006 SVIPQ8NHG7 77 aa9.88□□□□□ -0.83
CCDC7-203ENST00000362006 TP53AIP1Q9HCN2 124 aa9.86□□□□□ -0.83
CCDC7-203ENST00000362006 NDUFS5O43920 106 aa9.85□□□□□ -0.83
CCDC7-203ENST00000362006 C20orf166-AS1Q96NR2 134 aa9.83□□□□□ -0.84
CCDC7-203ENST00000362006 OCR1Q9BZK8 76 aa9.83□□□□□ -0.84
CCDC7-203ENST00000362006 A8MUU9 505 aa9.82□□□□□ -0.84
CCDC7-203ENST00000362006 TRAV7A0A075B6U4 112 aa9.81□□□□□ -0.84
CCDC7-203ENST00000362006 UQCRQO14949 82 aa9.8□□□□□ -0.84
CCDC7-203ENST00000362006 Q75L30 129 aa9.79□□□□□ -0.84
CCDC7-203ENST00000362006 ANAPC13Q9BS18 74 aa9.79□□□□□ -0.84
CCDC7-203ENST00000362006 XP32Q5T750 250 aa9.78□□□□□ -0.84
CCDC7-203ENST00000362006 SERP2Q8N6R1 65 aa9.77□□□□□ -0.84
CCDC7-203ENST00000362006 C5orf47Q569G3 176 aa9.73□□□□□ -0.85
CCDC7-203ENST00000362006 RPL37P61927 97 aaKnown RBP9.72□□□□□ -0.85
CCDC7-203ENST00000362006 TRAV22A0A0B4J277 110 aa9.7□□□□□ -0.86
CCDC7-203ENST00000362006 ZCCHC13Q8WW36 166 aaKnown RBP9.7□□□□□ -0.86
CCDC7-203ENST00000362006 COX7CP15954 63 aa9.69□□□□□ -0.86
CCDC7-203ENST00000362006 MP68P56378 58 aa9.68□□□□□ -0.86
CCDC7-203ENST00000362006 ATP11AUNQ6ZP68 121 aa9.68□□□□□ -0.86
CCDC7-203ENST00000362006 Q5W150 140 aa9.67□□□□□ -0.86
CCDC7-203ENST00000362006 H0Y9P7 68 aa9.66□□□□□ -0.86
CCDC7-203ENST00000362006 H3BPC8 53 aa9.65□□□□□ -0.86
CCDC7-203ENST00000362006 CCDC179H3BU77 68 aa9.64□□□□□ -0.87
CCDC7-203ENST00000362006 HERC1Q15751 4861 aa9.64□□□□□ -0.87
CCDC7-203ENST00000362006 LINC00208Q96KT6 92 aa9.58□□□□□ -0.88
CCDC7-203ENST00000362006 LPAP08519 4548 aa9.58□□□□□ -0.88
CCDC7-203ENST00000362006 LOC101927531A0A1B0GV80 90 aa9.58□□□□□ -0.88
CCDC7-203ENST00000362006 SEC61BP60468 96 aaKnown RBP9.58□□□□□ -0.88
CCDC7-203ENST00000362006 C1orf64Q8NEQ6 169 aa9.58□□□□□ -0.88
CCDC7-203ENST00000362006 C20orf197Q8N268 126 aa9.57□□□□□ -0.88
CCDC7-203ENST00000362006 A0A0U1RQV1 116 aa9.56□□□□□ -0.88
CCDC7-203ENST00000362006 HMCN2Q8NDA2 5059 aa9.54□□□□□ -0.88
CCDC7-203ENST00000362006 PCOTHQ58A44 107 aa9.54□□□□□ -0.88
CCDC7-203ENST00000362006 KLKP1Q107X0 134 aa9.53□□□□□ -0.88
CCDC7-203ENST00000362006 IGKV2-30P06310 120 aa9.53□□□□□ -0.88
CCDC7-203ENST00000362006 LRP2P98164 4655 aa9.51□□□□□ -0.89
CCDC7-203ENST00000362006 SNURFQ9Y675 71 aa9.5□□□□□ -0.89
CCDC7-203ENST00000362006 C7orf65Q6ZTY9 151 aa9.5□□□□□ -0.89
CCDC7-203ENST00000362006 CYP4F30PQ9H0H9 118 aa9.49□□□□□ -0.89
CCDC7-203ENST00000362006 IGKV2D-30A0A075B6S6 120 aa9.49□□□□□ -0.89
CCDC7-203ENST00000362006 SPINK7P58062 85 aa9.46□□□□□ -0.89
CCDC7-203ENST00000362006 NDUFC1O43677 76 aa9.45□□□□□ -0.9
CCDC7-203ENST00000362006 MUC17Q685J3 4493 aa9.38□□□□□ -0.91
CCDC7-203ENST00000362006 CYSTM1Q9H1C7 97 aa9.35□□□□□ -0.91
CCDC7-203ENST00000362006 H7BZZ5 65 aa9.35□□□□□ -0.91
CCDC7-203ENST00000362006 HRES1P13985 223 aa9.32□□□□□ -0.92
CCDC7-203ENST00000362006 SPANXA2-OT1Q8N9U9 137 aa9.3□□□□□ -0.92
CCDC7-203ENST00000362006 KRTAP4-1Q9BYQ7 146 aa9.26□□□□□ -0.93
CCDC7-203ENST00000362006 TMEM258P61165 79 aa9.24□□□□□ -0.93
CCDC7-203ENST00000362006 C4orf26Q17RF5 130 aa9.24□□□□□ -0.93
CCDC7-203ENST00000362006 RPS28P62857 69 aaKnown RBP9.22□□□□□ -0.93
CCDC7-203ENST00000362006 RBM12B-AS1Q9P1G2 102 aa9.22□□□□□ -0.93
CCDC7-203ENST00000362006 COX6B2Q6YFQ2 88 aa9.21□□□□□ -0.94
CCDC7-203ENST00000362006 MPLKIPQ8TAP9 179 aa9.21□□□□□ -0.94
CCDC7-203ENST00000362006 ATP5EP56381 51 aaPredicted RBP9.2□□□□□ -0.94
CCDC7-203ENST00000362006 A8MUN3 132 aa9.18□□□□□ -0.94
CCDC7-203ENST00000362006 FAM236DA0A1B0GTK5 79 aa9.17□□□□□ -0.94
CCDC7-203ENST00000362006 FAM236CP0DP71 79 aa9.17□□□□□ -0.94
CCDC7-203ENST00000362006 DMAC1Q96GE9 116 aa9.16□□□□□ -0.94
CCDC7-203ENST00000362006 ACYP2P14621 99 aa9.11□□□□□ -0.95
CCDC7-203ENST00000362006 KRTAP3-1Q9BYR8 98 aa9.1□□□□□ -0.95
CCDC7-203ENST00000362006 UBR4Q5T4S7 5183 aa9.08□□□□□ -0.96
CCDC7-203ENST00000362006 H1FX-AS1Q4G0G2 97 aa9.05□□□□□ -0.96
CCDC7-203ENST00000362006 RNF213Q63HN8 5207 aa9.02□□□□□ -0.97
CCDC7-203ENST00000362006 KRTAP19-2Q3LHN2 52 aa8.99□□□□□ -0.97
CCDC7-203ENST00000362006 MUC2Q02817 5179 aa8.98□□□□□ -0.97
CCDC7-203ENST00000362006 COA5Q86WW8 74 aa8.96□□□□□ -0.97
CCDC7-203ENST00000362006 SERP1Q9Y6X1 66 aa8.96□□□□□ -0.98
CCDC7-203ENST00000362006 CHKB-CPT1BH3BT56 60 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms