RNA–Protein interactions for RNA: ENST00000361917.5

COL11A2-202, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-202ENST00000361917 UBR5O95071 2799 aaPredicted RBP7.95□□□□□ -1.14
COL11A2-202ENST00000361917 XP32Q5T750 250 aa7.94□□□□□ -1.14
COL11A2-202ENST00000361917 REV3LO60673 3130 aa7.93□□□□□ -1.14
COL11A2-202ENST00000361917 ITPR2Q14571 2701 aa7.93□□□□□ -1.14
COL11A2-202ENST00000361917 DMXL2Q8TDJ6 3036 aa7.92□□□□□ -1.14
COL11A2-202ENST00000361917 ASH1LQ9NR48 2969 aaKnown RBP7.92□□□□□ -1.14
COL11A2-202ENST00000361917 BOD1L1Q8NFC6 3051 aa7.92□□□□□ -1.14
COL11A2-202ENST00000361917 FRYLO94915 3013 aa7.9□□□□□ -1.14
COL11A2-202ENST00000361917 ADGRG4Q8IZF6 3080 aa7.9□□□□□ -1.14
COL11A2-202ENST00000361917 CFAP47Q6ZTR5 3102 aa7.89□□□□□ -1.15
COL11A2-202ENST00000361917 ATMQ13315 3056 aa7.89□□□□□ -1.15
COL11A2-202ENST00000361917 KRTAP1-4P0C5Y4 121 aa7.89□□□□□ -1.15
COL11A2-202ENST00000361917 ITPR1Q14643 2758 aa7.89□□□□□ -1.15
COL11A2-202ENST00000361917 APCP25054 2843 aa7.87□□□□□ -1.15
COL11A2-202ENST00000361917 NSD1Q96L73 2696 aaPredicted RBP7.86□□□□□ -1.15
COL11A2-202ENST00000361917 TACC2O95359 2948 aa7.85□□□□□ -1.15
COL11A2-202ENST00000361917 KMT2BQ9UMN6 2715 aaPredicted RBP7.83□□□□□ -1.16
COL11A2-202ENST00000361917 PP632Q6XCG6 107 aa7.81□□□□□ -1.16
COL11A2-202ENST00000361917 H0YAA0 97 aa7.8□□□□□ -1.16
COL11A2-202ENST00000361917 SPEGQ15772 3267 aa7.8□□□□□ -1.16
COL11A2-202ENST00000361917 UTP20O75691 2785 aaKnown RBP7.79□□□□□ -1.16
COL11A2-202ENST00000361917 HIVEP1P15822 2718 aa7.78□□□□□ -1.16
COL11A2-202ENST00000361917 COL12A1Q99715 3063 aa7.78□□□□□ -1.16
COL11A2-202ENST00000361917 ZZEF1O43149 2961 aa7.76□□□□□ -1.17
COL11A2-202ENST00000361917 KRTAP10-10P60014 251 aa7.75□□□□□ -1.17
COL11A2-202ENST00000361917 SPTBN5Q9NRC6 3674 aaKnown RBP7.74□□□□□ -1.17
COL11A2-202ENST00000361917 TPRXLQ17RH7 258 aa7.71□□□□□ -1.17
COL11A2-202ENST00000361917 CRYBG3Q68DQ2 2970 aa7.69□□□□□ -1.18
COL11A2-202ENST00000361917 USP34Q70CQ2 3546 aa7.68□□□□□ -1.18
COL11A2-202ENST00000361917 P0C880 135 aa7.68□□□□□ -1.18
COL11A2-202ENST00000361917 FLNCQ14315 2725 aa7.62□□□□□ -1.19
COL11A2-202ENST00000361917 KRTAP13-3Q3SY46 172 aa7.61□□□□□ -1.19
COL11A2-202ENST00000361917 PRO2289Q9P1D8 64 aa7.6□□□□□ -1.19
COL11A2-202ENST00000361917 CELSR2Q9HCU4 2923 aa7.59□□□□□ -1.19
COL11A2-202ENST00000361917 MYO15AQ9UKN7 3530 aa7.56□□□□□ -1.2
COL11A2-202ENST00000361917 TENM4Q6N022 2769 aa7.56□□□□□ -1.2
COL11A2-202ENST00000361917 EYSQ5T1H1 3165 aa7.53□□□□□ -1.2
COL11A2-202ENST00000361917 TNRC18O15417 2968 aaPredicted RBP7.5□□□□□ -1.21
COL11A2-202ENST00000361917 DCHS2Q6V1P9 2916 aa7.48□□□□□ -1.21
COL11A2-202ENST00000361917 HRNRQ86YZ3 2850 aaPredicted RBP7.47□□□□□ -1.21
COL11A2-202ENST00000361917 LOC400499M0QZD8 3231 aa7.45□□□□□ -1.22
COL11A2-202ENST00000361917 ZANQ9Y493 2812 aa7.44□□□□□ -1.22
COL11A2-202ENST00000361917 NIPBLQ6KC79 2804 aaeCLIP7.43□□□□□ -1.22
COL11A2-202ENST00000361917 DMXL1Q9Y485 3027 aa7.41□□□□□ -1.22
COL11A2-202ENST00000361917 KRTAP12-2P59991 146 aa7.4□□□□□ -1.23
COL11A2-202ENST00000361917 WDFY3Q8IZQ1 3526 aa7.39□□□□□ -1.23
COL11A2-202ENST00000361917 FBN2P35556 2912 aa7.39□□□□□ -1.23
COL11A2-202ENST00000361917 DCHS1Q96JQ0 3298 aa7.33□□□□□ -1.24
COL11A2-202ENST00000361917 NF1P21359 2839 aa7.26□□□□□ -1.25
COL11A2-202ENST00000361917 ZFHX4Q86UP3 3567 aa7.26□□□□□ -1.25
COL11A2-202ENST00000361917 TGP01266 2768 aa7.26□□□□□ -1.25
COL11A2-202ENST00000361917 ASPMQ8IZT6 3477 aa7.26□□□□□ -1.25
COL11A2-202ENST00000361917 CSMD1Q96PZ7 3565 aa7.23□□□□□ -1.25
COL11A2-202ENST00000361917 KRTAP13-4Q3LI77 160 aa7.22□□□□□ -1.25
COL11A2-202ENST00000361917 RELNP78509 3460 aa7.21□□□□□ -1.25
COL11A2-202ENST00000361917 CELSR1Q9NYQ6 3014 aa7.21□□□□□ -1.25
COL11A2-202ENST00000361917 TENM2Q9NT68 2774 aa7.2□□□□□ -1.26
COL11A2-202ENST00000361917 KRTAP12-1P59990 96 aa7.19□□□□□ -1.26
COL11A2-202ENST00000361917 TENM1Q9UKZ4 2725 aa7.16□□□□□ -1.26
COL11A2-202ENST00000361917 KRTAP3-1Q9BYR8 98 aa7.1□□□□□ -1.27
COL11A2-202ENST00000361917 MXRA5Q9NR99 2828 aa7.06□□□□□ -1.28
COL11A2-202ENST00000361917 KRTAP15-1Q3LI76 137 aa7.06□□□□□ -1.28
COL11A2-202ENST00000361917 TENM3Q9P273 2699 aa7.04□□□□□ -1.28
COL11A2-202ENST00000361917 LAMA5O15230 3695 aa7.03□□□□□ -1.28
COL11A2-202ENST00000361917 SMG1Q96Q15 3661 aaKnown RBP7.02□□□□□ -1.29
COL11A2-202ENST00000361917 NBPF19A0A087WUL8 3843 aa6.9□□□□□ -1.31
COL11A2-202ENST00000361917 PDZD2O15018 2839 aa6.89□□□□□ -1.31
COL11A2-202ENST00000361917 KRTAP10-6P60371 365 aaPredicted RBP6.89□□□□□ -1.31
COL11A2-202ENST00000361917 SVEP1Q4LDE5 3571 aa6.88□□□□□ -1.31
COL11A2-202ENST00000361917 PKD1L1Q8TDX9 2849 aa6.85□□□□□ -1.31
COL11A2-202ENST00000361917 DMDP11532 3685 aa6.84□□□□□ -1.31
COL11A2-202ENST00000361917 VWFP04275 2813 aa6.83□□□□□ -1.32
COL11A2-202ENST00000361917 CRCT1Q9UGL9 99 aa6.78□□□□□ -1.32
COL11A2-202ENST00000361917 CUBNO60494 3623 aa6.75□□□□□ -1.33
COL11A2-202ENST00000361917 ANK3Q12955 4377 aaKnown RBP6.7□□□□□ -1.34
COL11A2-202ENST00000361917 MT1HL1P0DM35 61 aa6.68□□□□□ -1.34
COL11A2-202ENST00000361917 SPENQ96T58 3664 aaKnown RBP6.67□□□□□ -1.34
COL11A2-202ENST00000361917 KRTAP10-12P60413 245 aa6.67□□□□□ -1.34
COL11A2-202ENST00000361917 FBN1P35555 2871 aaKnown RBP6.64□□□□□ -1.35
COL11A2-202ENST00000361917 KRTAP3-2Q9BYR7 98 aa6.62□□□□□ -1.35
COL11A2-202ENST00000361917 KRTAP3-3Q9BYR6 98 aa6.62□□□□□ -1.35
COL11A2-202ENST00000361917 FBN3Q75N90 2809 aa6.6□□□□□ -1.35
COL11A2-202ENST00000361917 CSMD2Q7Z408 3487 aa6.58□□□□□ -1.36
COL11A2-202ENST00000361917 MEGF8Q7Z7M0 2845 aa6.56□□□□□ -1.36
COL11A2-202ENST00000361917 INE1O15225 51 aa6.55□□□□□ -1.36
COL11A2-202ENST00000361917 ZFHX3Q15911 3703 aa6.55□□□□□ -1.36
COL11A2-202ENST00000361917 KRTAP4-5Q9BYR2 181 aa6.54□□□□□ -1.36
COL11A2-202ENST00000361917 OTOGQ6ZRI0 2925 aa6.51□□□□□ -1.37
COL11A2-202ENST00000361917 TRRAPQ9Y4A5 3859 aa6.5□□□□□ -1.37
COL11A2-202ENST00000361917 SRRM2Q9UQ35 2752 aaKnown RBP6.48□□□□□ -1.37
COL11A2-202ENST00000361917 MUC3AQ02505 3323 aa6.47□□□□□ -1.37
COL11A2-202ENST00000361917 KRTAP12-3P60328 96 aa6.47□□□□□ -1.37
COL11A2-202ENST00000361917 LCE3AQ5TA76 89 aa6.44□□□□□ -1.38
COL11A2-202ENST00000361917 HUWE1Q7Z6Z7 4374 aaKnown RBP6.43□□□□□ -1.38
COL11A2-202ENST00000361917 KRTAP10-4P60372 401 aaPredicted RBP6.42□□□□□ -1.38
COL11A2-202ENST00000361917 BSNQ9UPA5 3926 aa6.39□□□□□ -1.39
COL11A2-202ENST00000361917 VPS13CQ709C8 3753 aa6.39□□□□□ -1.39
COL11A2-202ENST00000361917 COL7A1Q02388 2944 aa6.35□□□□□ -1.39
COL11A2-202ENST00000361917 ALMS1Q8TCU4 4167 aa6.34□□□□□ -1.39
COL11A2-202ENST00000361917 LORP23490 312 aaPredicted RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms