RNA–Protein interactions for RNA: ENST00000361303.7

LDLRAD4-202, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best)

Gene LDLRAD4, Length 8,086 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-202ENST00000361303 CYSTM1Q9H1C7 97 aa6.09□□□□□ -1.43
LDLRAD4-202ENST00000361303 ATMQ13315 3056 aa6.09□□□□□ -1.44
LDLRAD4-202ENST00000361303 NOTCH2NLQ7Z3S9 236 aa6.08□□□□□ -1.44
LDLRAD4-202ENST00000361303 ZZEF1O43149 2961 aa6.07□□□□□ -1.44
LDLRAD4-202ENST00000361303 DSPP15924 2871 aaKnown RBP6.07□□□□□ -1.44
LDLRAD4-202ENST00000361303 NBEAL2Q6ZNJ1 2754 aa6.06□□□□□ -1.44
LDLRAD4-202ENST00000361303 KALRNO60229 2985 aa6.06□□□□□ -1.44
LDLRAD4-202ENST00000361303 ADGRG4Q8IZF6 3080 aa6.04□□□□□ -1.44
LDLRAD4-202ENST00000361303 KRTAP13-2Q52LG2 175 aa6.04□□□□□ -1.44
LDLRAD4-202ENST00000361303 LOC400499M0QZD8 3231 aa6.04□□□□□ -1.44
LDLRAD4-202ENST00000361303 UBR5O95071 2799 aaPredicted RBP6.03□□□□□ -1.44
LDLRAD4-202ENST00000361303 KRTAP11-1Q8IUC1 163 aa6.03□□□□□ -1.44
LDLRAD4-202ENST00000361303 KRTAP13-1Q8IUC0 172 aa6.02□□□□□ -1.45
LDLRAD4-202ENST00000361303 TNP1P09430 55 aa6□□□□□ -1.45
LDLRAD4-202ENST00000361303 DCHS1Q96JQ0 3298 aa6□□□□□ -1.45
LDLRAD4-202ENST00000361303 SPENQ96T58 3664 aaKnown RBP6□□□□□ -1.45
LDLRAD4-202ENST00000361303 RELNP78509 3460 aa5.99□□□□□ -1.45
LDLRAD4-202ENST00000361303 APCP25054 2843 aa5.97□□□□□ -1.45
LDLRAD4-202ENST00000361303 COL12A1Q99715 3063 aa5.95□□□□□ -1.46
LDLRAD4-202ENST00000361303 DMXL2Q8TDJ6 3036 aa5.95□□□□□ -1.46
LDLRAD4-202ENST00000361303 ITPR1Q14643 2758 aa5.94□□□□□ -1.46
LDLRAD4-202ENST00000361303 KRTAP7-1Q8IUC3 87 aa5.94□□□□□ -1.46
LDLRAD4-202ENST00000361303 UTP20O75691 2785 aaKnown RBP5.92□□□□□ -1.46
LDLRAD4-202ENST00000361303 KRTAP25-1Q3LHN0 102 aa5.9□□□□□ -1.47
LDLRAD4-202ENST00000361303 A8MU10 97 aa5.89□□□□□ -1.47
LDLRAD4-202ENST00000361303 ZFHX4Q86UP3 3567 aa5.86□□□□□ -1.47
LDLRAD4-202ENST00000361303 DMDP11532 3685 aa5.85□□□□□ -1.47
LDLRAD4-202ENST00000361303 TPRXLQ17RH7 258 aa5.84□□□□□ -1.47
LDLRAD4-202ENST00000361303 PP632Q6XCG6 107 aa5.83□□□□□ -1.48
LDLRAD4-202ENST00000361303 DMXL1Q9Y485 3027 aa5.83□□□□□ -1.48
LDLRAD4-202ENST00000361303 XP32Q5T750 250 aa5.82□□□□□ -1.48
LDLRAD4-202ENST00000361303 HIVEP1P15822 2718 aa5.82□□□□□ -1.48
LDLRAD4-202ENST00000361303 TNRC18O15417 2968 aaPredicted RBP5.82□□□□□ -1.48
LDLRAD4-202ENST00000361303 PRO2289Q9P1D8 64 aa5.82□□□□□ -1.48
LDLRAD4-202ENST00000361303 KRTAP10-8P60410 259 aa5.81□□□□□ -1.48
LDLRAD4-202ENST00000361303 KRTAP16-1A8MUX0 517 aa5.81□□□□□ -1.48
LDLRAD4-202ENST00000361303 CSMD1Q96PZ7 3565 aa5.79□□□□□ -1.48
LDLRAD4-202ENST00000361303 TACC2O95359 2948 aa5.79□□□□□ -1.48
LDLRAD4-202ENST00000361303 FLNCQ14315 2725 aa5.79□□□□□ -1.48
LDLRAD4-202ENST00000361303 C10orf95Q9H7T3 257 aa5.77□□□□□ -1.49
LDLRAD4-202ENST00000361303 A6NN06 94 aa5.76□□□□□ -1.49
LDLRAD4-202ENST00000361303 ZFHX3Q15911 3703 aa5.76□□□□□ -1.49
LDLRAD4-202ENST00000361303 TENM4Q6N022 2769 aa5.75□□□□□ -1.49
LDLRAD4-202ENST00000361303 NBEAQ8NFP9 2946 aa5.74□□□□□ -1.49
LDLRAD4-202ENST00000361303 KRTAP1-4P0C5Y4 121 aa5.74□□□□□ -1.49
LDLRAD4-202ENST00000361303 SMG1Q96Q15 3661 aaKnown RBP5.73□□□□□ -1.49
LDLRAD4-202ENST00000361303 KRTAP10-10P60014 251 aa5.73□□□□□ -1.49
LDLRAD4-202ENST00000361303 A0A1B0GVY2 172 aa5.72□□□□□ -1.49
LDLRAD4-202ENST00000361303 NIPBLQ6KC79 2804 aaeCLIP5.69□□□□□ -1.5
LDLRAD4-202ENST00000361303 CELSR1Q9NYQ6 3014 aa5.65□□□□□ -1.51
LDLRAD4-202ENST00000361303 TENM1Q9UKZ4 2725 aa5.65□□□□□ -1.51
LDLRAD4-202ENST00000361303 NDUFAF8A1L188 74 aa5.64□□□□□ -1.51
LDLRAD4-202ENST00000361303 KRTAP13-3Q3SY46 172 aa5.62□□□□□ -1.51
LDLRAD4-202ENST00000361303 CELSR2Q9HCU4 2923 aa5.61□□□□□ -1.51
LDLRAD4-202ENST00000361303 CSMD2Q7Z408 3487 aa5.58□□□□□ -1.52
LDLRAD4-202ENST00000361303 DCHS2Q6V1P9 2916 aa5.55□□□□□ -1.52
LDLRAD4-202ENST00000361303 CUBNO60494 3623 aa5.55□□□□□ -1.52
LDLRAD4-202ENST00000361303 SVEP1Q4LDE5 3571 aa5.51□□□□□ -1.53
LDLRAD4-202ENST00000361303 NF1P21359 2839 aa5.5□□□□□ -1.53
LDLRAD4-202ENST00000361303 H0YAA0 97 aa5.49□□□□□ -1.53
LDLRAD4-202ENST00000361303 TENM3Q9P273 2699 aa5.49□□□□□ -1.53
LDLRAD4-202ENST00000361303 VPS13CQ709C8 3753 aa5.49□□□□□ -1.53
LDLRAD4-202ENST00000361303 P0C880 135 aa5.48□□□□□ -1.53
LDLRAD4-202ENST00000361303 BSNQ9UPA5 3926 aa5.42□□□□□ -1.54
LDLRAD4-202ENST00000361303 ZANQ9Y493 2812 aa5.41□□□□□ -1.54
LDLRAD4-202ENST00000361303 MUC3AQ02505 3323 aa5.41□□□□□ -1.54
LDLRAD4-202ENST00000361303 FBN2P35556 2912 aa5.4□□□□□ -1.55
LDLRAD4-202ENST00000361303 TENM2Q9NT68 2774 aa5.38□□□□□ -1.55
LDLRAD4-202ENST00000361303 HRNRQ86YZ3 2850 aaPredicted RBP5.37□□□□□ -1.55
LDLRAD4-202ENST00000361303 TGP01266 2768 aa5.36□□□□□ -1.55
LDLRAD4-202ENST00000361303 PKD1L1Q8TDX9 2849 aa5.34□□□□□ -1.56
LDLRAD4-202ENST00000361303 VWFP04275 2813 aa5.33□□□□□ -1.56
LDLRAD4-202ENST00000361303 MXRA5Q9NR99 2828 aa5.3□□□□□ -1.56
LDLRAD4-202ENST00000361303 KRTAP13-4Q3LI77 160 aa5.26□□□□□ -1.57
LDLRAD4-202ENST00000361303 AKAP9Q99996 3911 aa5.24□□□□□ -1.57
LDLRAD4-202ENST00000361303 PDZD2O15018 2839 aa5.23□□□□□ -1.57
LDLRAD4-202ENST00000361303 TRRAPQ9Y4A5 3859 aa5.21□□□□□ -1.57
LDLRAD4-202ENST00000361303 COL7A1Q02388 2944 aa5.21□□□□□ -1.57
LDLRAD4-202ENST00000361303 CSMD3Q7Z407 3707 aa5.21□□□□□ -1.58
LDLRAD4-202ENST00000361303 KRTAP12-2P59991 146 aa5.2□□□□□ -1.58
LDLRAD4-202ENST00000361303 KRTAP12-1P59990 96 aa5.12□□□□□ -1.59
LDLRAD4-202ENST00000361303 KRTAP15-1Q3LI76 137 aa5.11□□□□□ -1.59
LDLRAD4-202ENST00000361303 MEGF8Q7Z7M0 2845 aa5.11□□□□□ -1.59
LDLRAD4-202ENST00000361303 ZNF469Q96JG9 3925 aaPredicted RBP5.08□□□□□ -1.6
LDLRAD4-202ENST00000361303 KRTAP3-1Q9BYR8 98 aa4.98□□□□□ -1.61
LDLRAD4-202ENST00000361303 MT1HL1P0DM35 61 aa4.92□□□□□ -1.62
LDLRAD4-202ENST00000361303 KRTAP10-12P60413 245 aa4.91□□□□□ -1.62
LDLRAD4-202ENST00000361303 SRRM2Q9UQ35 2752 aaKnown RBP4.88□□□□□ -1.63
LDLRAD4-202ENST00000361303 KRTAP10-6P60371 365 aaPredicted RBP4.87□□□□□ -1.63
LDLRAD4-202ENST00000361303 FBN1P35555 2871 aaKnown RBP4.87□□□□□ -1.63
LDLRAD4-202ENST00000361303 FBN3Q75N90 2809 aa4.85□□□□□ -1.63
LDLRAD4-202ENST00000361303 OTOGQ6ZRI0 2925 aa4.84□□□□□ -1.63
LDLRAD4-202ENST00000361303 ALMS1Q8TCU4 4167 aa4.81□□□□□ -1.64
LDLRAD4-202ENST00000361303 CRCT1Q9UGL9 99 aa4.78□□□□□ -1.64
LDLRAD4-202ENST00000361303 INE1O15225 51 aa4.78□□□□□ -1.64
LDLRAD4-202ENST00000361303 LYSTQ99698 3801 aa4.78□□□□□ -1.64
LDLRAD4-202ENST00000361303 ANK3Q12955 4377 aaKnown RBP4.76□□□□□ -1.65
LDLRAD4-202ENST00000361303 KRTAP23-1A1A580 65 aa4.72□□□□□ -1.65
LDLRAD4-202ENST00000361303 KRTAP4-5Q9BYR2 181 aa4.71□□□□□ -1.66
LDLRAD4-202ENST00000361303 KRTAP12-3P60328 96 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms