RNA–Protein interactions for RNA: ENST00000358933.9

EDC4-201, Transcript of enhancer of mRNA decapping 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EDC4, Length 4,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-201ENST00000358933 M0R2T5 61 aa11.34□□□□□ -0.59
EDC4-201ENST00000358933 FRYLO94915 3013 aa11.34□□□□□ -0.59
EDC4-201ENST00000358933 ITPR2Q14571 2701 aa11.34□□□□□ -0.59
EDC4-201ENST00000358933 HIVEP1P15822 2718 aa11.34□□□□□ -0.59
EDC4-201ENST00000358933 BOD1L1Q8NFC6 3051 aa11.33□□□□□ -0.6
EDC4-201ENST00000358933 NIPBLQ6KC79 2804 aaeCLIP11.31□□□□□ -0.6
EDC4-201ENST00000358933 COL12A1Q99715 3063 aa11.3□□□□□ -0.6
EDC4-201ENST00000358933 PLAC4Q8WY50 150 aa11.29□□□□□ -0.6
EDC4-201ENST00000358933 Q5VSD8 79 aa11.26□□□□□ -0.61
EDC4-201ENST00000358933 CELSR2Q9HCU4 2923 aa11.25□□□□□ -0.61
EDC4-201ENST00000358933 ZZEF1O43149 2961 aa11.23□□□□□ -0.61
EDC4-201ENST00000358933 C20orf166-AS1Q96NR2 134 aa11.22□□□□□ -0.61
EDC4-201ENST00000358933 CFAP47Q6ZTR5 3102 aa11.18□□□□□ -0.62
EDC4-201ENST00000358933 REV3LO60673 3130 aa11.17□□□□□ -0.62
EDC4-201ENST00000358933 H0YAA0 97 aa11.17□□□□□ -0.62
EDC4-201ENST00000358933 COL6A3P12111 3177 aa11.13□□□□□ -0.63
EDC4-201ENST00000358933 C10orf95Q9H7T3 257 aa11.09□□□□□ -0.63
EDC4-201ENST00000358933 ZANQ9Y493 2812 aa11.09□□□□□ -0.63
EDC4-201ENST00000358933 SZT2Q5T011 3432 aa11.08□□□□□ -0.64
EDC4-201ENST00000358933 DCHS2Q6V1P9 2916 aa11.05□□□□□ -0.64
EDC4-201ENST00000358933 KMT2BQ9UMN6 2715 aaPredicted RBP11.03□□□□□ -0.64
EDC4-201ENST00000358933 SPEGQ15772 3267 aa10.99□□□□□ -0.65
EDC4-201ENST00000358933 P0C880 135 aa10.94□□□□□ -0.66
EDC4-201ENST00000358933 TNRC18O15417 2968 aaPredicted RBP10.9□□□□□ -0.66
EDC4-201ENST00000358933 TNP1P09430 55 aa10.9□□□□□ -0.67
EDC4-201ENST00000358933 DMXL1Q9Y485 3027 aa10.89□□□□□ -0.67
EDC4-201ENST00000358933 PP632Q6XCG6 107 aa10.88□□□□□ -0.67
EDC4-201ENST00000358933 FBN2P35556 2912 aa10.87□□□□□ -0.67
EDC4-201ENST00000358933 HRNRQ86YZ3 2850 aaPredicted RBP10.85□□□□□ -0.67
EDC4-201ENST00000358933 KRTAP1-4P0C5Y4 121 aa10.83□□□□□ -0.68
EDC4-201ENST00000358933 NF1P21359 2839 aa10.83□□□□□ -0.68
EDC4-201ENST00000358933 KRTAP13-3Q3SY46 172 aa10.8□□□□□ -0.68
EDC4-201ENST00000358933 TGP01266 2768 aa10.74□□□□□ -0.69
EDC4-201ENST00000358933 TENM4Q6N022 2769 aa10.73□□□□□ -0.69
EDC4-201ENST00000358933 TENM3Q9P273 2699 aa10.65□□□□□ -0.7
EDC4-201ENST00000358933 EYSQ5T1H1 3165 aa10.65□□□□□ -0.7
EDC4-201ENST00000358933 CRYBG3Q68DQ2 2970 aa10.64□□□□□ -0.71
EDC4-201ENST00000358933 KRTAP10-8P60410 259 aa10.63□□□□□ -0.71
EDC4-201ENST00000358933 LOC400499M0QZD8 3231 aa10.6□□□□□ -0.71
EDC4-201ENST00000358933 XP32Q5T750 250 aa10.59□□□□□ -0.71
EDC4-201ENST00000358933 MYO15AQ9UKN7 3530 aa10.58□□□□□ -0.72
EDC4-201ENST00000358933 MXRA5Q9NR99 2828 aa10.52□□□□□ -0.73
EDC4-201ENST00000358933 USP34Q70CQ2 3546 aa10.46□□□□□ -0.74
EDC4-201ENST00000358933 CELSR1Q9NYQ6 3014 aa10.45□□□□□ -0.74
EDC4-201ENST00000358933 TENM1Q9UKZ4 2725 aa10.42□□□□□ -0.74
EDC4-201ENST00000358933 PDZD2O15018 2839 aa10.42□□□□□ -0.74
EDC4-201ENST00000358933 TPRXLQ17RH7 258 aa10.35□□□□□ -0.75
EDC4-201ENST00000358933 SPTBN5Q9NRC6 3674 aaKnown RBP10.35□□□□□ -0.75
EDC4-201ENST00000358933 KRTAP12-2P59991 146 aa10.32□□□□□ -0.76
EDC4-201ENST00000358933 WDFY3Q8IZQ1 3526 aa10.18□□□□□ -0.78
EDC4-201ENST00000358933 KRTAP12-1P59990 96 aa10.18□□□□□ -0.78
EDC4-201ENST00000358933 DCHS1Q96JQ0 3298 aa10.17□□□□□ -0.78
EDC4-201ENST00000358933 TENM2Q9NT68 2774 aa10.15□□□□□ -0.78
EDC4-201ENST00000358933 KRTAP3-1Q9BYR8 98 aa10.15□□□□□ -0.79
EDC4-201ENST00000358933 A0A1B0GVY2 172 aa10.1□□□□□ -0.79
EDC4-201ENST00000358933 PKD1L1Q8TDX9 2849 aa10.06□□□□□ -0.8
EDC4-201ENST00000358933 KRTAP13-4Q3LI77 160 aa10.05□□□□□ -0.8
EDC4-201ENST00000358933 RELNP78509 3460 aa10□□□□□ -0.81
EDC4-201ENST00000358933 ASPMQ8IZT6 3477 aa9.97□□□□□ -0.81
EDC4-201ENST00000358933 KRTAP10-6P60371 365 aaPredicted RBP9.96□□□□□ -0.82
EDC4-201ENST00000358933 VWFP04275 2813 aa9.93□□□□□ -0.82
EDC4-201ENST00000358933 CSMD1Q96PZ7 3565 aa9.88□□□□□ -0.83
EDC4-201ENST00000358933 KRTAP15-1Q3LI76 137 aa9.88□□□□□ -0.83
EDC4-201ENST00000358933 ZFHX4Q86UP3 3567 aa9.85□□□□□ -0.83
EDC4-201ENST00000358933 KRTAP10-10P60014 251 aa9.82□□□□□ -0.84
EDC4-201ENST00000358933 KRTAP21-3Q3LHN1 58 aa9.8□□□□□ -0.84
EDC4-201ENST00000358933 MUC3AQ02505 3323 aa9.8□□□□□ -0.84
EDC4-201ENST00000358933 FBN1P35555 2871 aaKnown RBP9.78□□□□□ -0.84
EDC4-201ENST00000358933 LAMA5O15230 3695 aa9.78□□□□□ -0.84
EDC4-201ENST00000358933 FBN3Q75N90 2809 aa9.77□□□□□ -0.85
EDC4-201ENST00000358933 PRO2289Q9P1D8 64 aa9.75□□□□□ -0.85
EDC4-201ENST00000358933 SRRM2Q9UQ35 2752 aaKnown RBP9.72□□□□□ -0.85
EDC4-201ENST00000358933 MEGF8Q7Z7M0 2845 aa9.68□□□□□ -0.86
EDC4-201ENST00000358933 DMDP11532 3685 aa9.62□□□□□ -0.87
EDC4-201ENST00000358933 SMG1Q96Q15 3661 aaKnown RBP9.6□□□□□ -0.87
EDC4-201ENST00000358933 KRTAP3-2Q9BYR7 98 aa9.59□□□□□ -0.87
EDC4-201ENST00000358933 CUBNO60494 3623 aa9.54□□□□□ -0.88
EDC4-201ENST00000358933 KRTAP3-3Q9BYR6 98 aa9.5□□□□□ -0.89
EDC4-201ENST00000358933 INE1O15225 51 aa9.47□□□□□ -0.89
EDC4-201ENST00000358933 COL7A1Q02388 2944 aa9.42□□□□□ -0.9
EDC4-201ENST00000358933 SVEP1Q4LDE5 3571 aa9.41□□□□□ -0.9
EDC4-201ENST00000358933 OTOGQ6ZRI0 2925 aa9.36□□□□□ -0.91
EDC4-201ENST00000358933 NBPF19A0A087WUL8 3843 aa9.17□□□□□ -0.94
EDC4-201ENST00000358933 ANK3Q12955 4377 aaKnown RBP9.06□□□□□ -0.96
EDC4-201ENST00000358933 ZFHX3Q15911 3703 aa9.05□□□□□ -0.96
EDC4-201ENST00000358933 TRRAPQ9Y4A5 3859 aa9.04□□□□□ -0.96
EDC4-201ENST00000358933 SPENQ96T58 3664 aaKnown RBP9.04□□□□□ -0.96
EDC4-201ENST00000358933 KRTAP23-1A1A580 65 aa9.04□□□□□ -0.96
EDC4-201ENST00000358933 CSMD2Q7Z408 3487 aa9□□□□□ -0.97
EDC4-201ENST00000358933 MT1HL1P0DM35 61 aa8.97□□□□□ -0.97
EDC4-201ENST00000358933 KRTAP10-4P60372 401 aaPredicted RBP8.89□□□□□ -0.99
EDC4-201ENST00000358933 KRTAP10-12P60413 245 aa8.88□□□□□ -0.99
EDC4-201ENST00000358933 KRTAP12-3P60328 96 aa8.8□□□□□ -1
EDC4-201ENST00000358933 LORP23490 312 aaPredicted RBP8.77□□□□□ -1.01
EDC4-201ENST00000358933 LCE3AQ5TA76 89 aa8.73□□□□□ -1.01
EDC4-201ENST00000358933 HUWE1Q7Z6Z7 4374 aaKnown RBP8.64□□□□□ -1.03
EDC4-201ENST00000358933 VPS13CQ709C8 3753 aa8.59□□□□□ -1.03
EDC4-201ENST00000358933 BSNQ9UPA5 3926 aa8.54□□□□□ -1.04
EDC4-201ENST00000358933 CSMD3Q7Z407 3707 aa8.51□□□□□ -1.05
EDC4-201ENST00000358933 CRCT1Q9UGL9 99 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms