RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 USP34Q70CQ2 3546 aa3.82□□□□□ -1.8
TRIM38-201ENST00000357085 DCHS2Q6V1P9 2916 aa3.82□□□□□ -1.8
TRIM38-201ENST00000357085 TENM1Q9UKZ4 2725 aa3.81□□□□□ -1.8
TRIM38-201ENST00000357085 CELSR2Q9HCU4 2923 aa3.81□□□□□ -1.8
TRIM38-201ENST00000357085 ASH1LQ9NR48 2969 aaKnown RBP3.81□□□□□ -1.8
TRIM38-201ENST00000357085 WDFY3Q8IZQ1 3526 aa3.79□□□□□ -1.8
TRIM38-201ENST00000357085 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.79□□□□□ -1.8
TRIM38-201ENST00000357085 COL6A3P12111 3177 aa3.78□□□□□ -1.8
TRIM38-201ENST00000357085 A0A0D9SG42 100 aa3.78□□□□□ -1.81
TRIM38-201ENST00000357085 KRTAP24-1Q3LI83 254 aa3.77□□□□□ -1.81
TRIM38-201ENST00000357085 KRTAP13-3Q3SY46 172 aa3.77□□□□□ -1.81
TRIM38-201ENST00000357085 NDUFAF8A1L188 74 aa3.77□□□□□ -1.81
TRIM38-201ENST00000357085 SPEGQ15772 3267 aa3.77□□□□□ -1.81
TRIM38-201ENST00000357085 DMDP11532 3685 aa3.76□□□□□ -1.81
TRIM38-201ENST00000357085 M0QZ58 72 aa3.76□□□□□ -1.81
TRIM38-201ENST00000357085 DMXL1Q9Y485 3027 aa3.76□□□□□ -1.81
TRIM38-201ENST00000357085 KRTAP1-5Q9BYS1 174 aa3.75□□□□□ -1.81
TRIM38-201ENST00000357085 SMG1Q96Q15 3661 aaKnown RBP3.75□□□□□ -1.81
TRIM38-201ENST00000357085 ATMQ13315 3056 aa3.75□□□□□ -1.81
TRIM38-201ENST00000357085 TENM4Q6N022 2769 aa3.75□□□□□ -1.81
TRIM38-201ENST00000357085 PDZD2O15018 2839 aa3.74□□□□□ -1.81
TRIM38-201ENST00000357085 KRTAP11-1Q8IUC1 163 aa3.74□□□□□ -1.81
TRIM38-201ENST00000357085 S4R3F8 94 aa3.73□□□□□ -1.81
TRIM38-201ENST00000357085 ZFHX4Q86UP3 3567 aa3.73□□□□□ -1.81
TRIM38-201ENST00000357085 Q6ZRN7 208 aaPredicted RBP3.73□□□□□ -1.81
TRIM38-201ENST00000357085 CAMK2N1Q7Z7J9 78 aa3.72□□□□□ -1.81
TRIM38-201ENST00000357085 C20orf166-AS1Q96NR2 134 aa3.72□□□□□ -1.81
TRIM38-201ENST00000357085 CFAP47Q6ZTR5 3102 aa3.72□□□□□ -1.81
TRIM38-201ENST00000357085 PP632Q6XCG6 107 aa3.71□□□□□ -1.82
TRIM38-201ENST00000357085 H0YAA0 97 aa3.7□□□□□ -1.82
TRIM38-201ENST00000357085 SEC61BP60468 96 aaKnown RBP3.7□□□□□ -1.82
TRIM38-201ENST00000357085 Q6ZSA8 131 aa3.69□□□□□ -1.82
TRIM38-201ENST00000357085 PKD1L1Q8TDX9 2849 aa3.69□□□□□ -1.82
TRIM38-201ENST00000357085 C9orf92A6NGG3 77 aa3.67□□□□□ -1.82
TRIM38-201ENST00000357085 TENM2Q9NT68 2774 aa3.65□□□□□ -1.82
TRIM38-201ENST00000357085 CSMD1Q96PZ7 3565 aa3.65□□□□□ -1.83
TRIM38-201ENST00000357085 MEGF8Q7Z7M0 2845 aa3.64□□□□□ -1.83
TRIM38-201ENST00000357085 LOC400499M0QZD8 3231 aa3.64□□□□□ -1.83
TRIM38-201ENST00000357085 SPENQ96T58 3664 aaKnown RBP3.62□□□□□ -1.83
TRIM38-201ENST00000357085 COL12A1Q99715 3063 aa3.62□□□□□ -1.83
TRIM38-201ENST00000357085 LAMA5O15230 3695 aa3.62□□□□□ -1.83
TRIM38-201ENST00000357085 DCHS1Q96JQ0 3298 aa3.62□□□□□ -1.83
TRIM38-201ENST00000357085 KRTAP13-2Q52LG2 175 aa3.6□□□□□ -1.83
TRIM38-201ENST00000357085 P0C880 135 aa3.59□□□□□ -1.84
TRIM38-201ENST00000357085 CRYBG3Q68DQ2 2970 aa3.58□□□□□ -1.84
TRIM38-201ENST00000357085 SRRM2Q9UQ35 2752 aaKnown RBP3.57□□□□□ -1.84
TRIM38-201ENST00000357085 R4GN34 69 aa3.56□□□□□ -1.84
TRIM38-201ENST00000357085 AKAP9Q99996 3911 aa3.55□□□□□ -1.84
TRIM38-201ENST00000357085 CELSR1Q9NYQ6 3014 aa3.54□□□□□ -1.84
TRIM38-201ENST00000357085 SVEP1Q4LDE5 3571 aa3.54□□□□□ -1.84
TRIM38-201ENST00000357085 ASPMQ8IZT6 3477 aa3.54□□□□□ -1.84
TRIM38-201ENST00000357085 PLAC4Q8WY50 150 aa3.53□□□□□ -1.84
TRIM38-201ENST00000357085 C10orf95Q9H7T3 257 aa3.52□□□□□ -1.85
TRIM38-201ENST00000357085 EYSQ5T1H1 3165 aa3.52□□□□□ -1.85
TRIM38-201ENST00000357085 VPS13CQ709C8 3753 aa3.5□□□□□ -1.85
TRIM38-201ENST00000357085 KRTAP1-4P0C5Y4 121 aa3.49□□□□□ -1.85
TRIM38-201ENST00000357085 ALMS1Q8TCU4 4167 aa3.49□□□□□ -1.85
TRIM38-201ENST00000357085 KRTAP15-1Q3LI76 137 aa3.47□□□□□ -1.85
TRIM38-201ENST00000357085 TPRXLQ17RH7 258 aa3.47□□□□□ -1.85
TRIM38-201ENST00000357085 KRTAP10-1P60331 282 aa3.46□□□□□ -1.86
TRIM38-201ENST00000357085 TNP1P09430 55 aa3.43□□□□□ -1.86
TRIM38-201ENST00000357085 RELNP78509 3460 aa3.43□□□□□ -1.86
TRIM38-201ENST00000357085 FBN1P35555 2871 aaKnown RBP3.43□□□□□ -1.86
TRIM38-201ENST00000357085 BSNQ9UPA5 3926 aa3.43□□□□□ -1.86
TRIM38-201ENST00000357085 KRTAP10-2P60368 255 aa3.43□□□□□ -1.86
TRIM38-201ENST00000357085 NBPF19A0A087WUL8 3843 aa3.41□□□□□ -1.86
TRIM38-201ENST00000357085 OTOGQ6ZRI0 2925 aa3.39□□□□□ -1.87
TRIM38-201ENST00000357085 SMR3BP02814 79 aaPredicted RBP3.37□□□□□ -1.87
TRIM38-201ENST00000357085 KRTAP23-1A1A580 65 aa3.36□□□□□ -1.87
TRIM38-201ENST00000357085 XP32Q5T750 250 aa3.35□□□□□ -1.87
TRIM38-201ENST00000357085 FBN3Q75N90 2809 aa3.35□□□□□ -1.87
TRIM38-201ENST00000357085 KRTAP12-2P59991 146 aa3.35□□□□□ -1.87
TRIM38-201ENST00000357085 KRTAP13-4Q3LI77 160 aa3.33□□□□□ -1.88
TRIM38-201ENST00000357085 KRTAP3-1Q9BYR8 98 aa3.33□□□□□ -1.88
TRIM38-201ENST00000357085 INE1O15225 51 aa3.3□□□□□ -1.88
TRIM38-201ENST00000357085 Q5VSD8 79 aa3.3□□□□□ -1.88
TRIM38-201ENST00000357085 KRTAP10-6P60371 365 aaPredicted RBP3.29□□□□□ -1.88
TRIM38-201ENST00000357085 MUC3AQ02505 3323 aa3.29□□□□□ -1.88
TRIM38-201ENST00000357085 KRTAP12-1P59990 96 aa3.28□□□□□ -1.88
TRIM38-201ENST00000357085 CUBNO60494 3623 aa3.26□□□□□ -1.89
TRIM38-201ENST00000357085 TRRAPQ9Y4A5 3859 aa3.26□□□□□ -1.89
TRIM38-201ENST00000357085 COL7A1Q02388 2944 aa3.25□□□□□ -1.89
TRIM38-201ENST00000357085 J3QL48 77 aa3.25□□□□□ -1.89
TRIM38-201ENST00000357085 KRTAP21-3Q3LHN1 58 aa3.25□□□□□ -1.89
TRIM38-201ENST00000357085 HECTD4Q9Y4D8 3996 aa3.24□□□□□ -1.89
TRIM38-201ENST00000357085 CSMD2Q7Z408 3487 aa3.23□□□□□ -1.89
TRIM38-201ENST00000357085 KRTAP10-8P60410 259 aa3.23□□□□□ -1.89
TRIM38-201ENST00000357085 LYSTQ99698 3801 aa3.2□□□□□ -1.9
TRIM38-201ENST00000357085 KRTAP3-2Q9BYR7 98 aa3.2□□□□□ -1.9
TRIM38-201ENST00000357085 PRO2289Q9P1D8 64 aa3.18□□□□□ -1.9
TRIM38-201ENST00000357085 ANK2Q01484 3957 aa3.17□□□□□ -1.9
TRIM38-201ENST00000357085 KRTAP3-3Q9BYR6 98 aa3.15□□□□□ -1.9
TRIM38-201ENST00000357085 DNAH3Q8TD57 4116 aa3.15□□□□□ -1.91
TRIM38-201ENST00000357085 DNAH7Q8WXX0 4024 aa3.14□□□□□ -1.91
TRIM38-201ENST00000357085 CMYA5Q8N3K9 4069 aa3.12□□□□□ -1.91
TRIM38-201ENST00000357085 A0A1B0GVY2 172 aa3.1□□□□□ -1.91
TRIM38-201ENST00000357085 ZNF469Q96JG9 3925 aaPredicted RBP3.1□□□□□ -1.91
TRIM38-201ENST00000357085 CSMD3Q7Z407 3707 aa3.09□□□□□ -1.92
TRIM38-201ENST00000357085 ANK3Q12955 4377 aaKnown RBP3.07□□□□□ -1.92
TRIM38-201ENST00000357085 M0R2T5 61 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 280.1 ms