RNA–Protein interactions for RNA: ENST00000355451.7

NUDCD3-202, Transcript of NudC domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUDCD3, Length 8,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-202ENST00000355451 RELNP78509 3460 aa6.69□□□□□ -1.34
NUDCD3-202ENST00000355451 KRTAP26-1Q6PEX3 210 aa6.67□□□□□ -1.34
NUDCD3-202ENST00000355451 NDUFAF8A1L188 74 aa6.67□□□□□ -1.34
NUDCD3-202ENST00000355451 CSMD1Q96PZ7 3565 aa6.67□□□□□ -1.34
NUDCD3-202ENST00000355451 KMT2BQ9UMN6 2715 aaPredicted RBP6.66□□□□□ -1.34
NUDCD3-202ENST00000355451 TNRC18O15417 2968 aaPredicted RBP6.66□□□□□ -1.34
NUDCD3-202ENST00000355451 PRO2289Q9P1D8 64 aa6.64□□□□□ -1.35
NUDCD3-202ENST00000355451 SPRR1AP35321 89 aa6.64□□□□□ -1.35
NUDCD3-202ENST00000355451 ITPR2Q14571 2701 aa6.64□□□□□ -1.35
NUDCD3-202ENST00000355451 ZFHX4Q86UP3 3567 aa6.63□□□□□ -1.35
NUDCD3-202ENST00000355451 A0A087X002 238 aa6.63□□□□□ -1.35
NUDCD3-202ENST00000355451 A8MU10 97 aa6.61□□□□□ -1.35
NUDCD3-202ENST00000355451 KRTAP1-5Q9BYS1 174 aa6.6□□□□□ -1.35
NUDCD3-202ENST00000355451 NBEAL2Q6ZNJ1 2754 aa6.6□□□□□ -1.35
NUDCD3-202ENST00000355451 GCN1Q92616 2671 aaKnown RBP6.6□□□□□ -1.35
NUDCD3-202ENST00000355451 KRTAP25-1Q3LHN0 102 aa6.59□□□□□ -1.35
NUDCD3-202ENST00000355451 ASB16-AS1Q495Z4 193 aa6.58□□□□□ -1.36
NUDCD3-202ENST00000355451 A0A1B0GVY2 172 aa6.57□□□□□ -1.36
NUDCD3-202ENST00000355451 DMDP11532 3685 aa6.57□□□□□ -1.36
NUDCD3-202ENST00000355451 APCP25054 2843 aa6.55□□□□□ -1.36
NUDCD3-202ENST00000355451 NBPF19A0A087WUL8 3843 aa6.54□□□□□ -1.36
NUDCD3-202ENST00000355451 SPENQ96T58 3664 aaKnown RBP6.53□□□□□ -1.36
NUDCD3-202ENST00000355451 KRTAP10-10P60014 251 aa6.52□□□□□ -1.37
NUDCD3-202ENST00000355451 RPS29P62273 56 aaKnown RBP6.5□□□□□ -1.37
NUDCD3-202ENST00000355451 Q5XG85 94 aa6.5□□□□□ -1.37
NUDCD3-202ENST00000355451 ZNF292O60281 2723 aa6.48□□□□□ -1.37
NUDCD3-202ENST00000355451 CUBNO60494 3623 aa6.48□□□□□ -1.37
NUDCD3-202ENST00000355451 PP632Q6XCG6 107 aa6.47□□□□□ -1.37
NUDCD3-202ENST00000355451 UTP20O75691 2785 aaKnown RBP6.43□□□□□ -1.38
NUDCD3-202ENST00000355451 ITPR1Q14643 2758 aa6.43□□□□□ -1.38
NUDCD3-202ENST00000355451 SMG1Q96Q15 3661 aaKnown RBP6.4□□□□□ -1.38
NUDCD3-202ENST00000355451 NOTCH2NLQ7Z3S9 236 aa6.39□□□□□ -1.39
NUDCD3-202ENST00000355451 CYSTM1Q9H1C7 97 aa6.38□□□□□ -1.39
NUDCD3-202ENST00000355451 CELSR2Q9HCU4 2923 aa6.36□□□□□ -1.39
NUDCD3-202ENST00000355451 KRTAP4-16G5E9R7 235 aaPredicted RBP6.36□□□□□ -1.39
NUDCD3-202ENST00000355451 SVEP1Q4LDE5 3571 aa6.36□□□□□ -1.39
NUDCD3-202ENST00000355451 MUC3AQ02505 3323 aa6.34□□□□□ -1.39
NUDCD3-202ENST00000355451 Q6ZRN7 208 aaPredicted RBP6.32□□□□□ -1.4
NUDCD3-202ENST00000355451 UBR5O95071 2799 aaPredicted RBP6.31□□□□□ -1.4
NUDCD3-202ENST00000355451 DCHS2Q6V1P9 2916 aa6.3□□□□□ -1.4
NUDCD3-202ENST00000355451 HIVEP1P15822 2718 aa6.29□□□□□ -1.4
NUDCD3-202ENST00000355451 CELSR1Q9NYQ6 3014 aa6.28□□□□□ -1.4
NUDCD3-202ENST00000355451 FLNCQ14315 2725 aa6.27□□□□□ -1.41
NUDCD3-202ENST00000355451 KRTAP29-1A8MX34 341 aaPredicted RBP6.25□□□□□ -1.41
NUDCD3-202ENST00000355451 KRTAP11-1Q8IUC1 163 aa6.24□□□□□ -1.41
NUDCD3-202ENST00000355451 FBN2P35556 2912 aa6.23□□□□□ -1.41
NUDCD3-202ENST00000355451 KRTAP13-2Q52LG2 175 aa6.21□□□□□ -1.41
NUDCD3-202ENST00000355451 ZFHX3Q15911 3703 aa6.2□□□□□ -1.42
NUDCD3-202ENST00000355451 TENM1Q9UKZ4 2725 aa6.19□□□□□ -1.42
NUDCD3-202ENST00000355451 TENM3Q9P273 2699 aa6.18□□□□□ -1.42
NUDCD3-202ENST00000355451 A6NN06 94 aa6.17□□□□□ -1.42
NUDCD3-202ENST00000355451 CSMD2Q7Z408 3487 aa6.17□□□□□ -1.42
NUDCD3-202ENST00000355451 XP32Q5T750 250 aa6.14□□□□□ -1.43
NUDCD3-202ENST00000355451 NIPBLQ6KC79 2804 aaeCLIP6.13□□□□□ -1.43
NUDCD3-202ENST00000355451 ZANQ9Y493 2812 aa6.13□□□□□ -1.43
NUDCD3-202ENST00000355451 TPRXLQ17RH7 258 aa6.09□□□□□ -1.44
NUDCD3-202ENST00000355451 NF1P21359 2839 aa6.07□□□□□ -1.44
NUDCD3-202ENST00000355451 KRTAP21-3Q3LHN1 58 aa6.06□□□□□ -1.44
NUDCD3-202ENST00000355451 HRNRQ86YZ3 2850 aaPredicted RBP6□□□□□ -1.45
NUDCD3-202ENST00000355451 VPS13CQ709C8 3753 aa5.98□□□□□ -1.45
NUDCD3-202ENST00000355451 KRTAP12-2P59991 146 aa5.97□□□□□ -1.45
NUDCD3-202ENST00000355451 BSNQ9UPA5 3926 aa5.96□□□□□ -1.46
NUDCD3-202ENST00000355451 PDZD2O15018 2839 aa5.94□□□□□ -1.46
NUDCD3-202ENST00000355451 KRTAP13-1Q8IUC0 172 aa5.92□□□□□ -1.46
NUDCD3-202ENST00000355451 CRCT1Q9UGL9 99 aa5.89□□□□□ -1.47
NUDCD3-202ENST00000355451 KRTAP15-1Q3LI76 137 aa5.89□□□□□ -1.47
NUDCD3-202ENST00000355451 MXRA5Q9NR99 2828 aa5.89□□□□□ -1.47
NUDCD3-202ENST00000355451 H0YAA0 97 aa5.89□□□□□ -1.47
NUDCD3-202ENST00000355451 TENM4Q6N022 2769 aa5.88□□□□□ -1.47
NUDCD3-202ENST00000355451 PKD1L1Q8TDX9 2849 aa5.87□□□□□ -1.47
NUDCD3-202ENST00000355451 VWFP04275 2813 aa5.84□□□□□ -1.47
NUDCD3-202ENST00000355451 KRTAP7-1Q8IUC3 87 aa5.82□□□□□ -1.48
NUDCD3-202ENST00000355451 KRTAP13-3Q3SY46 172 aa5.78□□□□□ -1.48
NUDCD3-202ENST00000355451 TGP01266 2768 aa5.77□□□□□ -1.49
NUDCD3-202ENST00000355451 CSMD3Q7Z407 3707 aa5.76□□□□□ -1.49
NUDCD3-202ENST00000355451 TRRAPQ9Y4A5 3859 aa5.74□□□□□ -1.49
NUDCD3-202ENST00000355451 KRTAP1-4P0C5Y4 121 aa5.72□□□□□ -1.49
NUDCD3-202ENST00000355451 KRTAP13-4Q3LI77 160 aa5.7□□□□□ -1.5
NUDCD3-202ENST00000355451 FBN1P35555 2871 aaKnown RBP5.59□□□□□ -1.51
NUDCD3-202ENST00000355451 ZNF469Q96JG9 3925 aaPredicted RBP5.59□□□□□ -1.51
NUDCD3-202ENST00000355451 KRTAP10-6P60371 365 aaPredicted RBP5.58□□□□□ -1.52
NUDCD3-202ENST00000355451 AKAP9Q99996 3911 aa5.57□□□□□ -1.52
NUDCD3-202ENST00000355451 COL7A1Q02388 2944 aa5.56□□□□□ -1.52
NUDCD3-202ENST00000355451 TENM2Q9NT68 2774 aa5.56□□□□□ -1.52
NUDCD3-202ENST00000355451 SRRM2Q9UQ35 2752 aaKnown RBP5.52□□□□□ -1.53
NUDCD3-202ENST00000355451 MEGF8Q7Z7M0 2845 aa5.46□□□□□ -1.54
NUDCD3-202ENST00000355451 OTOGQ6ZRI0 2925 aa5.44□□□□□ -1.54
NUDCD3-202ENST00000355451 INE1O15225 51 aa5.44□□□□□ -1.54
NUDCD3-202ENST00000355451 KRTAP10-12P60413 245 aa5.43□□□□□ -1.54
NUDCD3-202ENST00000355451 KRTAP12-1P59990 96 aa5.42□□□□□ -1.54
NUDCD3-202ENST00000355451 FBN3Q75N90 2809 aa5.36□□□□□ -1.55
NUDCD3-202ENST00000355451 KRTAP10-5P60370 271 aa5.31□□□□□ -1.56
NUDCD3-202ENST00000355451 LORP23490 312 aaPredicted RBP5.28□□□□□ -1.56
NUDCD3-202ENST00000355451 KRTAP8-1Q8IUC2 63 aa5.2□□□□□ -1.58
NUDCD3-202ENST00000355451 ANK3Q12955 4377 aaKnown RBP5.2□□□□□ -1.58
NUDCD3-202ENST00000355451 KRTAP12-3P60328 96 aa5.16□□□□□ -1.58
NUDCD3-202ENST00000355451 FRAS1Q86XX4 4008 aa5.06□□□□□ -1.6
NUDCD3-202ENST00000355451 KRTAP10-7P60409 375 aaPredicted RBP5.03□□□□□ -1.6
NUDCD3-202ENST00000355451 HUWE1Q7Z6Z7 4374 aaKnown RBP5□□□□□ -1.61
NUDCD3-202ENST00000355451 LCE3AQ5TA76 89 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms