RNA–Protein interactions for RNA: ENST00000354749.6

TTC3-201, Transcript of tetratricopeptide repeat domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC3, Length 9,084 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-201ENST00000354749 FRYLO94915 3013 aa3.52□□□□□ -1.85
TTC3-201ENST00000354749 ZANQ9Y493 2812 aa3.52□□□□□ -1.85
TTC3-201ENST00000354749 H0YAA0 97 aa3.5□□□□□ -1.85
TTC3-201ENST00000354749 TGP01266 2768 aa3.49□□□□□ -1.85
TTC3-201ENST00000354749 WDFY4Q6ZS81 3184 aa3.49□□□□□ -1.85
TTC3-201ENST00000354749 TENM1Q9UKZ4 2725 aa3.49□□□□□ -1.85
TTC3-201ENST00000354749 P0C880 135 aa3.48□□□□□ -1.85
TTC3-201ENST00000354749 DCHS2Q6V1P9 2916 aa3.48□□□□□ -1.85
TTC3-201ENST00000354749 KRTAP1-4P0C5Y4 121 aa3.47□□□□□ -1.85
TTC3-201ENST00000354749 XP32Q5T750 250 aa3.46□□□□□ -1.86
TTC3-201ENST00000354749 XIRP2A4UGR9 3374 aa3.46□□□□□ -1.86
TTC3-201ENST00000354749 FREM2Q5SZK8 3169 aa3.45□□□□□ -1.86
TTC3-201ENST00000354749 PRUNE2Q8WUY3 3088 aa3.45□□□□□ -1.86
TTC3-201ENST00000354749 VWFP04275 2813 aa3.45□□□□□ -1.86
TTC3-201ENST00000354749 ZZEF1O43149 2961 aa3.45□□□□□ -1.86
TTC3-201ENST00000354749 LAMA2P24043 3122 aaKnown RBP3.45□□□□□ -1.86
TTC3-201ENST00000354749 ATMQ13315 3056 aa3.45□□□□□ -1.86
TTC3-201ENST00000354749 DMXL2Q8TDJ6 3036 aa3.43□□□□□ -1.86
TTC3-201ENST00000354749 VPS13AQ96RL7 3174 aa3.41□□□□□ -1.86
TTC3-201ENST00000354749 TENM2Q9NT68 2774 aa3.41□□□□□ -1.86
TTC3-201ENST00000354749 REV3LO60673 3130 aa3.41□□□□□ -1.86
TTC3-201ENST00000354749 COL12A1Q99715 3063 aa3.39□□□□□ -1.87
TTC3-201ENST00000354749 A0A1B0GVY2 172 aa3.38□□□□□ -1.87
TTC3-201ENST00000354749 TPRXLQ17RH7 258 aa3.38□□□□□ -1.87
TTC3-201ENST00000354749 KRTAP10-8P60410 259 aa3.37□□□□□ -1.87
TTC3-201ENST00000354749 KRTAP13-3Q3SY46 172 aa3.36□□□□□ -1.87
TTC3-201ENST00000354749 KRTAP21-3Q3LHN1 58 aa3.35□□□□□ -1.87
TTC3-201ENST00000354749 DMXL1Q9Y485 3027 aa3.35□□□□□ -1.87
TTC3-201ENST00000354749 LAMA3Q16787 3333 aa3.34□□□□□ -1.87
TTC3-201ENST00000354749 CELSR3Q9NYQ7 3312 aa3.34□□□□□ -1.87
TTC3-201ENST00000354749 FBN2P35556 2912 aa3.34□□□□□ -1.87
TTC3-201ENST00000354749 LAMA1P25391 3075 aa3.33□□□□□ -1.88
TTC3-201ENST00000354749 PDZD2O15018 2839 aa3.33□□□□□ -1.88
TTC3-201ENST00000354749 CRYBG3Q68DQ2 2970 aa3.32□□□□□ -1.88
TTC3-201ENST00000354749 PRO2289Q9P1D8 64 aa3.31□□□□□ -1.88
TTC3-201ENST00000354749 BRCA2P51587 3418 aa3.3□□□□□ -1.88
TTC3-201ENST00000354749 MKI67P46013 3256 aaKnown RBP3.3□□□□□ -1.88
TTC3-201ENST00000354749 SZT2Q5T011 3432 aa3.3□□□□□ -1.88
TTC3-201ENST00000354749 PKD1L1Q8TDX9 2849 aa3.29□□□□□ -1.88
TTC3-201ENST00000354749 ADGRG4Q8IZF6 3080 aa3.29□□□□□ -1.88
TTC3-201ENST00000354749 KRTAP12-2P59991 146 aa3.26□□□□□ -1.89
TTC3-201ENST00000354749 SRRM2Q9UQ35 2752 aaKnown RBP3.26□□□□□ -1.89
TTC3-201ENST00000354749 BOD1L1Q8NFC6 3051 aa3.26□□□□□ -1.89
TTC3-201ENST00000354749 KRTAP10-10P60014 251 aa3.25□□□□□ -1.89
TTC3-201ENST00000354749 KRTAP13-4Q3LI77 160 aa3.25□□□□□ -1.89
TTC3-201ENST00000354749 VCANP13611 3396 aa3.24□□□□□ -1.89
TTC3-201ENST00000354749 SPTBN5Q9NRC6 3674 aaKnown RBP3.24□□□□□ -1.89
TTC3-201ENST00000354749 CDH23Q9H251 3354 aa3.24□□□□□ -1.89
TTC3-201ENST00000354749 CFAP47Q6ZTR5 3102 aa3.23□□□□□ -1.89
TTC3-201ENST00000354749 UNC80Q8N2C7 3258 aa3.19□□□□□ -1.9
TTC3-201ENST00000354749 KRTAP12-1P59990 96 aa3.19□□□□□ -1.9
TTC3-201ENST00000354749 EYSQ5T1H1 3165 aa3.18□□□□□ -1.9
TTC3-201ENST00000354749 SPEGQ15772 3267 aa3.18□□□□□ -1.9
TTC3-201ENST00000354749 DNAH14Q0VDD8 3507 aa3.17□□□□□ -1.9
TTC3-201ENST00000354749 DMDP11532 3685 aa3.16□□□□□ -1.9
TTC3-201ENST00000354749 COL6A3P12111 3177 aa3.16□□□□□ -1.9
TTC3-201ENST00000354749 ZFHX4Q86UP3 3567 aa3.16□□□□□ -1.9
TTC3-201ENST00000354749 SPENQ96T58 3664 aaKnown RBP3.15□□□□□ -1.9
TTC3-201ENST00000354749 KRTAP3-1Q9BYR8 98 aa3.14□□□□□ -1.91
TTC3-201ENST00000354749 FBN1P35555 2871 aaKnown RBP3.14□□□□□ -1.91
TTC3-201ENST00000354749 MEGF8Q7Z7M0 2845 aa3.13□□□□□ -1.91
TTC3-201ENST00000354749 CELSR1Q9NYQ6 3014 aa3.12□□□□□ -1.91
TTC3-201ENST00000354749 AKAP9Q99996 3911 aa3.11□□□□□ -1.91
TTC3-201ENST00000354749 KRTAP10-6P60371 365 aaPredicted RBP3.1□□□□□ -1.91
TTC3-201ENST00000354749 USP34Q70CQ2 3546 aa3.09□□□□□ -1.92
TTC3-201ENST00000354749 MYO15AQ9UKN7 3530 aa3.07□□□□□ -1.92
TTC3-201ENST00000354749 KRTAP15-1Q3LI76 137 aa3.06□□□□□ -1.92
TTC3-201ENST00000354749 CRCT1Q9UGL9 99 aa3.06□□□□□ -1.92
TTC3-201ENST00000354749 INE1O15225 51 aa3.05□□□□□ -1.92
TTC3-201ENST00000354749 ASPMQ8IZT6 3477 aa3.05□□□□□ -1.92
TTC3-201ENST00000354749 FBN3Q75N90 2809 aa3.05□□□□□ -1.92
TTC3-201ENST00000354749 LAMA5O15230 3695 aa3.05□□□□□ -1.92
TTC3-201ENST00000354749 OTOGQ6ZRI0 2925 aa3.04□□□□□ -1.92
TTC3-201ENST00000354749 COL7A1Q02388 2944 aa3.01□□□□□ -1.93
TTC3-201ENST00000354749 ZFHX3Q15911 3703 aa3□□□□□ -1.93
TTC3-201ENST00000354749 KRTAP23-1A1A580 65 aa3□□□□□ -1.93
TTC3-201ENST00000354749 KRTAP3-2Q9BYR7 98 aa2.97□□□□□ -1.93
TTC3-201ENST00000354749 LOC400499M0QZD8 3231 aa2.96□□□□□ -1.94
TTC3-201ENST00000354749 KRTAP3-3Q9BYR6 98 aa2.94□□□□□ -1.94
TTC3-201ENST00000354749 MUC3AQ02505 3323 aa2.93□□□□□ -1.94
TTC3-201ENST00000354749 WDFY3Q8IZQ1 3526 aa2.93□□□□□ -1.94
TTC3-201ENST00000354749 KRTAP10-12P60413 245 aa2.93□□□□□ -1.94
TTC3-201ENST00000354749 BSNQ9UPA5 3926 aa2.92□□□□□ -1.94
TTC3-201ENST00000354749 SMG1Q96Q15 3661 aaKnown RBP2.91□□□□□ -1.94
TTC3-201ENST00000354749 TRRAPQ9Y4A5 3859 aa2.91□□□□□ -1.94
TTC3-201ENST00000354749 MT1HL1P0DM35 61 aa2.87□□□□□ -1.95
TTC3-201ENST00000354749 NBPF19A0A087WUL8 3843 aa2.86□□□□□ -1.95
TTC3-201ENST00000354749 KRTAP12-3P60328 96 aa2.86□□□□□ -1.95
TTC3-201ENST00000354749 DCHS1Q96JQ0 3298 aa2.85□□□□□ -1.95
TTC3-201ENST00000354749 VPS13CQ709C8 3753 aa2.84□□□□□ -1.96
TTC3-201ENST00000354749 KRTAP10-4P60372 401 aaPredicted RBP2.82□□□□□ -1.96
TTC3-201ENST00000354749 HECTD4Q9Y4D8 3996 aa2.81□□□□□ -1.96
TTC3-201ENST00000354749 DNAH3Q8TD57 4116 aa2.81□□□□□ -1.96
TTC3-201ENST00000354749 RELNP78509 3460 aa2.79□□□□□ -1.96
TTC3-201ENST00000354749 LCE3AQ5TA76 89 aa2.78□□□□□ -1.96
TTC3-201ENST00000354749 LYSTQ99698 3801 aa2.78□□□□□ -1.97
TTC3-201ENST00000354749 CSMD1Q96PZ7 3565 aa2.77□□□□□ -1.97
TTC3-201ENST00000354749 ANK2Q01484 3957 aa2.77□□□□□ -1.97
TTC3-201ENST00000354749 KRTAP19-4Q3LI73 84 aa2.77□□□□□ -1.97
TTC3-201ENST00000354749 CUBNO60494 3623 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 153.9 ms