RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 FRYLO94915 3013 aa4.57□□□□□ -1.68
SCN8A-201ENST00000354534 KRTAP10-8P60410 259 aa4.56□□□□□ -1.68
SCN8A-201ENST00000354534 ZANQ9Y493 2812 aa4.56□□□□□ -1.68
SCN8A-201ENST00000354534 DNAH14Q0VDD8 3507 aa4.55□□□□□ -1.68
SCN8A-201ENST00000354534 RPS29P62273 56 aaKnown RBP4.55□□□□□ -1.68
SCN8A-201ENST00000354534 TENM1Q9UKZ4 2725 aa4.55□□□□□ -1.68
SCN8A-201ENST00000354534 KRTAP1-5Q9BYS1 174 aa4.52□□□□□ -1.69
SCN8A-201ENST00000354534 WDFY4Q6ZS81 3184 aa4.51□□□□□ -1.69
SCN8A-201ENST00000354534 LCE6AA0A183 80 aa4.51□□□□□ -1.69
SCN8A-201ENST00000354534 CDH23Q9H251 3354 aa4.5□□□□□ -1.69
SCN8A-201ENST00000354534 PRUNE2Q8WUY3 3088 aa4.45□□□□□ -1.7
SCN8A-201ENST00000354534 A0A1B0GVY2 172 aa4.44□□□□□ -1.7
SCN8A-201ENST00000354534 VCANP13611 3396 aa4.44□□□□□ -1.7
SCN8A-201ENST00000354534 TGP01266 2768 aa4.43□□□□□ -1.7
SCN8A-201ENST00000354534 DMXL2Q8TDJ6 3036 aa4.42□□□□□ -1.7
SCN8A-201ENST00000354534 BOD1L1Q8NFC6 3051 aa4.42□□□□□ -1.7
SCN8A-201ENST00000354534 TNRC18O15417 2968 aaPredicted RBP4.42□□□□□ -1.7
SCN8A-201ENST00000354534 ASH1LQ9NR48 2969 aaKnown RBP4.41□□□□□ -1.7
SCN8A-201ENST00000354534 MXRA5Q9NR99 2828 aa4.41□□□□□ -1.7
SCN8A-201ENST00000354534 CELSR2Q9HCU4 2923 aa4.4□□□□□ -1.7
SCN8A-201ENST00000354534 ZZEF1O43149 2961 aa4.4□□□□□ -1.7
SCN8A-201ENST00000354534 TENM4Q6N022 2769 aa4.38□□□□□ -1.71
SCN8A-201ENST00000354534 ADGRG4Q8IZF6 3080 aa4.38□□□□□ -1.71
SCN8A-201ENST00000354534 DCHS2Q6V1P9 2916 aa4.37□□□□□ -1.71
SCN8A-201ENST00000354534 H0YAA0 97 aa4.37□□□□□ -1.71
SCN8A-201ENST00000354534 FBN2P35556 2912 aa4.37□□□□□ -1.71
SCN8A-201ENST00000354534 PDZD2O15018 2839 aa4.36□□□□□ -1.71
SCN8A-201ENST00000354534 SZT2Q5T011 3432 aa4.35□□□□□ -1.71
SCN8A-201ENST00000354534 PRO2289Q9P1D8 64 aa4.35□□□□□ -1.71
SCN8A-201ENST00000354534 Q6ZRN7 208 aaPredicted RBP4.33□□□□□ -1.72
SCN8A-201ENST00000354534 SPEGQ15772 3267 aa4.32□□□□□ -1.72
SCN8A-201ENST00000354534 SPTBN5Q9NRC6 3674 aaKnown RBP4.31□□□□□ -1.72
SCN8A-201ENST00000354534 KRTAP13-1Q8IUC0 172 aa4.29□□□□□ -1.72
SCN8A-201ENST00000354534 COL6A3P12111 3177 aa4.29□□□□□ -1.72
SCN8A-201ENST00000354534 ATMQ13315 3056 aa4.29□□□□□ -1.72
SCN8A-201ENST00000354534 KRTAP13-2Q52LG2 175 aa4.28□□□□□ -1.72
SCN8A-201ENST00000354534 CRYBG3Q68DQ2 2970 aa4.28□□□□□ -1.72
SCN8A-201ENST00000354534 CFAP47Q6ZTR5 3102 aa4.28□□□□□ -1.72
SCN8A-201ENST00000354534 DMXL1Q9Y485 3027 aa4.27□□□□□ -1.73
SCN8A-201ENST00000354534 KRTAP10-10P60014 251 aa4.26□□□□□ -1.73
SCN8A-201ENST00000354534 WDFY3Q8IZQ1 3526 aa4.25□□□□□ -1.73
SCN8A-201ENST00000354534 VWFP04275 2813 aa4.25□□□□□ -1.73
SCN8A-201ENST00000354534 MYO15AQ9UKN7 3530 aa4.25□□□□□ -1.73
SCN8A-201ENST00000354534 KRTAP12-2P59991 146 aa4.22□□□□□ -1.73
SCN8A-201ENST00000354534 SRRM2Q9UQ35 2752 aaKnown RBP4.2□□□□□ -1.74
SCN8A-201ENST00000354534 PKD1L1Q8TDX9 2849 aa4.2□□□□□ -1.74
SCN8A-201ENST00000354534 KRTAP7-1Q8IUC3 87 aa4.19□□□□□ -1.74
SCN8A-201ENST00000354534 TENM2Q9NT68 2774 aa4.19□□□□□ -1.74
SCN8A-201ENST00000354534 COL12A1Q99715 3063 aa4.17□□□□□ -1.74
SCN8A-201ENST00000354534 USP34Q70CQ2 3546 aa4.16□□□□□ -1.74
SCN8A-201ENST00000354534 LOC400499M0QZD8 3231 aa4.15□□□□□ -1.74
SCN8A-201ENST00000354534 DCHS1Q96JQ0 3298 aa4.13□□□□□ -1.75
SCN8A-201ENST00000354534 XP32Q5T750 250 aa4.13□□□□□ -1.75
SCN8A-201ENST00000354534 ASPMQ8IZT6 3477 aa4.12□□□□□ -1.75
SCN8A-201ENST00000354534 KRTAP15-1Q3LI76 137 aa4.09□□□□□ -1.76
SCN8A-201ENST00000354534 ZFHX4Q86UP3 3567 aa4.08□□□□□ -1.76
SCN8A-201ENST00000354534 TPRXLQ17RH7 258 aa4.08□□□□□ -1.76
SCN8A-201ENST00000354534 SMG1Q96Q15 3661 aaKnown RBP4.07□□□□□ -1.76
SCN8A-201ENST00000354534 INE1O15225 51 aa4.07□□□□□ -1.76
SCN8A-201ENST00000354534 EYSQ5T1H1 3165 aa4.06□□□□□ -1.76
SCN8A-201ENST00000354534 DMDP11532 3685 aa4.06□□□□□ -1.76
SCN8A-201ENST00000354534 KRTAP13-4Q3LI77 160 aa4.06□□□□□ -1.76
SCN8A-201ENST00000354534 CELSR1Q9NYQ6 3014 aa4.03□□□□□ -1.76
SCN8A-201ENST00000354534 ZFHX3Q15911 3703 aa4.02□□□□□ -1.77
SCN8A-201ENST00000354534 KRTAP1-4P0C5Y4 121 aa4.01□□□□□ -1.77
SCN8A-201ENST00000354534 CSMD1Q96PZ7 3565 aa3.99□□□□□ -1.77
SCN8A-201ENST00000354534 CRCT1Q9UGL9 99 aa3.98□□□□□ -1.77
SCN8A-201ENST00000354534 COL7A1Q02388 2944 aa3.96□□□□□ -1.78
SCN8A-201ENST00000354534 LAMA5O15230 3695 aa3.96□□□□□ -1.78
SCN8A-201ENST00000354534 KRTAP12-1P59990 96 aa3.95□□□□□ -1.78
SCN8A-201ENST00000354534 KRTAP21-3Q3LHN1 58 aa3.94□□□□□ -1.78
SCN8A-201ENST00000354534 KRTAP13-3Q3SY46 172 aa3.93□□□□□ -1.78
SCN8A-201ENST00000354534 SPENQ96T58 3664 aaKnown RBP3.93□□□□□ -1.78
SCN8A-201ENST00000354534 SVEP1Q4LDE5 3571 aa3.89□□□□□ -1.79
SCN8A-201ENST00000354534 FBN1P35555 2871 aaKnown RBP3.88□□□□□ -1.79
SCN8A-201ENST00000354534 RELNP78509 3460 aa3.88□□□□□ -1.79
SCN8A-201ENST00000354534 MEGF8Q7Z7M0 2845 aa3.85□□□□□ -1.79
SCN8A-201ENST00000354534 NBPF19A0A087WUL8 3843 aa3.85□□□□□ -1.79
SCN8A-201ENST00000354534 FBN3Q75N90 2809 aa3.79□□□□□ -1.8
SCN8A-201ENST00000354534 OTOGQ6ZRI0 2925 aa3.78□□□□□ -1.8
SCN8A-201ENST00000354534 CUBNO60494 3623 aa3.74□□□□□ -1.81
SCN8A-201ENST00000354534 MUC3AQ02505 3323 aa3.73□□□□□ -1.81
SCN8A-201ENST00000354534 VPS13CQ709C8 3753 aa3.72□□□□□ -1.81
SCN8A-201ENST00000354534 KRTAP10-12P60413 245 aa3.69□□□□□ -1.82
SCN8A-201ENST00000354534 KRTAP10-6P60371 365 aaPredicted RBP3.69□□□□□ -1.82
SCN8A-201ENST00000354534 KRTAP10-5P60370 271 aa3.69□□□□□ -1.82
SCN8A-201ENST00000354534 KRTAP23-1A1A580 65 aa3.63□□□□□ -1.83
SCN8A-201ENST00000354534 KRTAP3-1Q9BYR8 98 aa3.62□□□□□ -1.83
SCN8A-201ENST00000354534 AKAP9Q99996 3911 aa3.59□□□□□ -1.83
SCN8A-201ENST00000354534 KRTAP12-3P60328 96 aa3.58□□□□□ -1.84
SCN8A-201ENST00000354534 CSMD2Q7Z408 3487 aa3.56□□□□□ -1.84
SCN8A-201ENST00000354534 BSNQ9UPA5 3926 aa3.56□□□□□ -1.84
SCN8A-201ENST00000354534 TRRAPQ9Y4A5 3859 aa3.53□□□□□ -1.84
SCN8A-201ENST00000354534 LCE3AQ5TA76 89 aa3.53□□□□□ -1.84
SCN8A-201ENST00000354534 CSMD3Q7Z407 3707 aa3.44□□□□□ -1.86
SCN8A-201ENST00000354534 KRTAP3-2Q9BYR7 98 aa3.43□□□□□ -1.86
SCN8A-201ENST00000354534 KRTAP10-7P60409 375 aaPredicted RBP3.41□□□□□ -1.86
SCN8A-201ENST00000354534 LORP23490 312 aaPredicted RBP3.39□□□□□ -1.87
SCN8A-201ENST00000354534 KRTAP3-3Q9BYR6 98 aa3.37□□□□□ -1.87
SCN8A-201ENST00000354534 KRTAP8-1Q8IUC2 63 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 155.6 ms