RNA–Protein interactions for RNA: ENST00000352385.2

IGDCC4-201, Transcript of immunoglobulin superfamily DCC subclass member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IGDCC4, Length 6,508 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGDCC4-201ENST00000352385 VPS13AQ96RL7 3174 aa10.83□□□□□ -0.68
IGDCC4-201ENST00000352385 TPRXLQ17RH7 258 aa10.8□□□□□ -0.68
IGDCC4-201ENST00000352385 MAP1AP78559 2803 aaPredicted RBP10.78□□□□□ -0.68
IGDCC4-201ENST00000352385 KMT2BQ9UMN6 2715 aaPredicted RBP10.78□□□□□ -0.68
IGDCC4-201ENST00000352385 APCP25054 2843 aa10.78□□□□□ -0.68
IGDCC4-201ENST00000352385 DNAH14Q0VDD8 3507 aa10.73□□□□□ -0.69
IGDCC4-201ENST00000352385 ITPR1Q14643 2758 aa10.7□□□□□ -0.7
IGDCC4-201ENST00000352385 PRO2289Q9P1D8 64 aa10.68□□□□□ -0.7
IGDCC4-201ENST00000352385 COL6A3P12111 3177 aa10.66□□□□□ -0.7
IGDCC4-201ENST00000352385 KRTAP13-3Q3SY46 172 aa10.66□□□□□ -0.7
IGDCC4-201ENST00000352385 LRBAP50851 2863 aa10.65□□□□□ -0.7
IGDCC4-201ENST00000352385 UTP20O75691 2785 aaKnown RBP10.65□□□□□ -0.7
IGDCC4-201ENST00000352385 HIVEP1P15822 2718 aa10.61□□□□□ -0.71
IGDCC4-201ENST00000352385 CRYBG3Q68DQ2 2970 aa10.56□□□□□ -0.72
IGDCC4-201ENST00000352385 TACC2O95359 2948 aa10.56□□□□□ -0.72
IGDCC4-201ENST00000352385 VCANP13611 3396 aa10.55□□□□□ -0.72
IGDCC4-201ENST00000352385 DMXL2Q8TDJ6 3036 aa10.54□□□□□ -0.72
IGDCC4-201ENST00000352385 ATMQ13315 3056 aa10.54□□□□□ -0.72
IGDCC4-201ENST00000352385 ASH1LQ9NR48 2969 aaKnown RBP10.54□□□□□ -0.72
IGDCC4-201ENST00000352385 SZT2Q5T011 3432 aa10.49□□□□□ -0.73
IGDCC4-201ENST00000352385 CFAP47Q6ZTR5 3102 aa10.46□□□□□ -0.74
IGDCC4-201ENST00000352385 LAMA1P25391 3075 aa10.45□□□□□ -0.74
IGDCC4-201ENST00000352385 COL12A1Q99715 3063 aa10.44□□□□□ -0.74
IGDCC4-201ENST00000352385 KRTAP12-2P59991 146 aa10.43□□□□□ -0.74
IGDCC4-201ENST00000352385 ADGRG4Q8IZF6 3080 aa10.39□□□□□ -0.75
IGDCC4-201ENST00000352385 BOD1L1Q8NFC6 3051 aa10.38□□□□□ -0.75
IGDCC4-201ENST00000352385 REV3LO60673 3130 aa10.37□□□□□ -0.75
IGDCC4-201ENST00000352385 NBEAQ8NFP9 2946 aa10.32□□□□□ -0.76
IGDCC4-201ENST00000352385 FRYLO94915 3013 aa10.27□□□□□ -0.76
IGDCC4-201ENST00000352385 EYSQ5T1H1 3165 aa10.23□□□□□ -0.77
IGDCC4-201ENST00000352385 FLNCQ14315 2725 aa10.23□□□□□ -0.77
IGDCC4-201ENST00000352385 TENM4Q6N022 2769 aa10.22□□□□□ -0.77
IGDCC4-201ENST00000352385 ZZEF1O43149 2961 aa10.21□□□□□ -0.77
IGDCC4-201ENST00000352385 CELSR2Q9HCU4 2923 aa10.21□□□□□ -0.78
IGDCC4-201ENST00000352385 KRTAP13-4Q3LI77 160 aa10.2□□□□□ -0.78
IGDCC4-201ENST00000352385 USP34Q70CQ2 3546 aa10.18□□□□□ -0.78
IGDCC4-201ENST00000352385 SPEGQ15772 3267 aa10.17□□□□□ -0.78
IGDCC4-201ENST00000352385 SPTBN5Q9NRC6 3674 aaKnown RBP10.17□□□□□ -0.78
IGDCC4-201ENST00000352385 KRTAP12-1P59990 96 aa10.14□□□□□ -0.79
IGDCC4-201ENST00000352385 NIPBLQ6KC79 2804 aaeCLIP10.12□□□□□ -0.79
IGDCC4-201ENST00000352385 DCHS2Q6V1P9 2916 aa10.09□□□□□ -0.79
IGDCC4-201ENST00000352385 KRTAP3-1Q9BYR8 98 aa9.98□□□□□ -0.81
IGDCC4-201ENST00000352385 TGP01266 2768 aa9.98□□□□□ -0.81
IGDCC4-201ENST00000352385 TNRC18O15417 2968 aaPredicted RBP9.97□□□□□ -0.81
IGDCC4-201ENST00000352385 HRNRQ86YZ3 2850 aaPredicted RBP9.95□□□□□ -0.82
IGDCC4-201ENST00000352385 KRTAP15-1Q3LI76 137 aa9.94□□□□□ -0.82
IGDCC4-201ENST00000352385 TENM2Q9NT68 2774 aa9.93□□□□□ -0.82
IGDCC4-201ENST00000352385 TENM1Q9UKZ4 2725 aa9.89□□□□□ -0.83
IGDCC4-201ENST00000352385 ZANQ9Y493 2812 aa9.85□□□□□ -0.83
IGDCC4-201ENST00000352385 MYO15AQ9UKN7 3530 aa9.84□□□□□ -0.83
IGDCC4-201ENST00000352385 CELSR1Q9NYQ6 3014 aa9.8□□□□□ -0.84
IGDCC4-201ENST00000352385 FBN2P35556 2912 aa9.77□□□□□ -0.84
IGDCC4-201ENST00000352385 NF1P21359 2839 aa9.76□□□□□ -0.85
IGDCC4-201ENST00000352385 DMXL1Q9Y485 3027 aa9.74□□□□□ -0.85
IGDCC4-201ENST00000352385 KRTAP10-6P60371 365 aaPredicted RBP9.7□□□□□ -0.86
IGDCC4-201ENST00000352385 WDFY3Q8IZQ1 3526 aa9.65□□□□□ -0.86
IGDCC4-201ENST00000352385 TENM3Q9P273 2699 aa9.65□□□□□ -0.86
IGDCC4-201ENST00000352385 LOC400499M0QZD8 3231 aa9.63□□□□□ -0.87
IGDCC4-201ENST00000352385 CRCT1Q9UGL9 99 aa9.61□□□□□ -0.87
IGDCC4-201ENST00000352385 ASPMQ8IZT6 3477 aa9.57□□□□□ -0.88
IGDCC4-201ENST00000352385 DCHS1Q96JQ0 3298 aa9.46□□□□□ -0.89
IGDCC4-201ENST00000352385 NBPF19A0A087WUL8 3843 aa9.46□□□□□ -0.89
IGDCC4-201ENST00000352385 RELNP78509 3460 aa9.43□□□□□ -0.9
IGDCC4-201ENST00000352385 MXRA5Q9NR99 2828 aa9.41□□□□□ -0.9
IGDCC4-201ENST00000352385 KRTAP10-12P60413 245 aa9.38□□□□□ -0.91
IGDCC4-201ENST00000352385 PKD1L1Q8TDX9 2849 aa9.36□□□□□ -0.91
IGDCC4-201ENST00000352385 INE1O15225 51 aa9.34□□□□□ -0.91
IGDCC4-201ENST00000352385 ZFHX4Q86UP3 3567 aa9.34□□□□□ -0.91
IGDCC4-201ENST00000352385 PDZD2O15018 2839 aa9.33□□□□□ -0.92
IGDCC4-201ENST00000352385 VWFP04275 2813 aa9.33□□□□□ -0.92
IGDCC4-201ENST00000352385 CSMD1Q96PZ7 3565 aa9.32□□□□□ -0.92
IGDCC4-201ENST00000352385 KRTAP3-2Q9BYR7 98 aa9.32□□□□□ -0.92
IGDCC4-201ENST00000352385 MT1HL1P0DM35 61 aa9.31□□□□□ -0.92
IGDCC4-201ENST00000352385 KRTAP3-3Q9BYR6 98 aa9.31□□□□□ -0.92
IGDCC4-201ENST00000352385 ANK3Q12955 4377 aaKnown RBP9.25□□□□□ -0.93
IGDCC4-201ENST00000352385 KRTAP12-3P60328 96 aa9.1□□□□□ -0.95
IGDCC4-201ENST00000352385 LAMA5O15230 3695 aa9.09□□□□□ -0.95
IGDCC4-201ENST00000352385 LCE3AQ5TA76 89 aa9.06□□□□□ -0.96
IGDCC4-201ENST00000352385 KRTAP4-5Q9BYR2 181 aa9.06□□□□□ -0.96
IGDCC4-201ENST00000352385 SMG1Q96Q15 3661 aaKnown RBP8.98□□□□□ -0.97
IGDCC4-201ENST00000352385 KRTAP10-4P60372 401 aaPredicted RBP8.95□□□□□ -0.98
IGDCC4-201ENST00000352385 HUWE1Q7Z6Z7 4374 aaKnown RBP8.94□□□□□ -0.98
IGDCC4-201ENST00000352385 MEGF8Q7Z7M0 2845 aa8.92□□□□□ -0.98
IGDCC4-201ENST00000352385 FBN3Q75N90 2809 aa8.92□□□□□ -0.98
IGDCC4-201ENST00000352385 DMDP11532 3685 aa8.92□□□□□ -0.98
IGDCC4-201ENST00000352385 LORP23490 312 aaPredicted RBP8.88□□□□□ -0.99
IGDCC4-201ENST00000352385 ZFHX3Q15911 3703 aa8.86□□□□□ -0.99
IGDCC4-201ENST00000352385 KRTAP23-1A1A580 65 aa8.84□□□□□ -0.99
IGDCC4-201ENST00000352385 ALMS1Q8TCU4 4167 aa8.83□□□□□ -1
IGDCC4-201ENST00000352385 FBN1P35555 2871 aaKnown RBP8.81□□□□□ -1
IGDCC4-201ENST00000352385 SVEP1Q4LDE5 3571 aa8.8□□□□□ -1
IGDCC4-201ENST00000352385 KRTAP10-5P60370 271 aa8.8□□□□□ -1
IGDCC4-201ENST00000352385 OTOGQ6ZRI0 2925 aa8.79□□□□□ -1
IGDCC4-201ENST00000352385 TRRAPQ9Y4A5 3859 aa8.72□□□□□ -1.01
IGDCC4-201ENST00000352385 SPENQ96T58 3664 aaKnown RBP8.67□□□□□ -1.02
IGDCC4-201ENST00000352385 CSMD2Q7Z408 3487 aa8.67□□□□□ -1.02
IGDCC4-201ENST00000352385 CUBNO60494 3623 aa8.66□□□□□ -1.02
IGDCC4-201ENST00000352385 KRTAP8-1Q8IUC2 63 aa8.65□□□□□ -1.02
IGDCC4-201ENST00000352385 SRRM2Q9UQ35 2752 aaKnown RBP8.63□□□□□ -1.03
IGDCC4-201ENST00000352385 COL7A1Q02388 2944 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms