RNA–Protein interactions for RNA: ENST00000350773.8

TSC2-202, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSC2, Length 5,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-202ENST00000350773 KALRNO60229 2985 aa8.99□□□□□ -0.97
TSC2-202ENST00000350773 MYO15AQ9UKN7 3530 aa8.98□□□□□ -0.97
TSC2-202ENST00000350773 DMBT1Q9UGM3 2413 aaPredicted RBP8.98□□□□□ -0.97
TSC2-202ENST00000350773 COL12A1Q99715 3063 aa8.97□□□□□ -0.97
TSC2-202ENST00000350773 FLG2Q5D862 2391 aaPredicted RBP8.94□□□□□ -0.98
TSC2-202ENST00000350773 PLAC4Q8WY50 150 aa8.9□□□□□ -0.99
TSC2-202ENST00000350773 UTP20O75691 2785 aaKnown RBP8.89□□□□□ -0.99
TSC2-202ENST00000350773 ITPR1Q14643 2758 aa8.88□□□□□ -0.99
TSC2-202ENST00000350773 A8MUU9 505 aa8.87□□□□□ -0.99
TSC2-202ENST00000350773 LOC400499M0QZD8 3231 aa8.87□□□□□ -0.99
TSC2-202ENST00000350773 NSD1Q96L73 2696 aaPredicted RBP8.87□□□□□ -0.99
TSC2-202ENST00000350773 ITPR2Q14571 2701 aa8.85□□□□□ -0.99
TSC2-202ENST00000350773 STAB2Q8WWQ8 2551 aa8.83□□□□□ -1
TSC2-202ENST00000350773 KMT2BQ9UMN6 2715 aaPredicted RBP8.82□□□□□ -1
TSC2-202ENST00000350773 KRTAP16-1A8MUX0 517 aa8.8□□□□□ -1
TSC2-202ENST00000350773 C20orf166-AS1Q96NR2 134 aa8.79□□□□□ -1
TSC2-202ENST00000350773 HRNRQ86YZ3 2850 aaPredicted RBP8.78□□□□□ -1
TSC2-202ENST00000350773 TACC2O95359 2948 aa8.78□□□□□ -1
TSC2-202ENST00000350773 ZZEF1O43149 2961 aa8.77□□□□□ -1.01
TSC2-202ENST00000350773 APCP25054 2843 aa8.74□□□□□ -1.01
TSC2-202ENST00000350773 CFAP47Q6ZTR5 3102 aa8.72□□□□□ -1.01
TSC2-202ENST00000350773 NDUFAF8A1L188 74 aa8.68□□□□□ -1.02
TSC2-202ENST00000350773 HIVEP1P15822 2718 aa8.64□□□□□ -1.03
TSC2-202ENST00000350773 KRTAP1-4P0C5Y4 121 aa8.63□□□□□ -1.03
TSC2-202ENST00000350773 ZANQ9Y493 2812 aa8.62□□□□□ -1.03
TSC2-202ENST00000350773 WDFY3Q8IZQ1 3526 aa8.61□□□□□ -1.03
TSC2-202ENST00000350773 DMDP11532 3685 aa8.59□□□□□ -1.03
TSC2-202ENST00000350773 ASH1LQ9NR48 2969 aaKnown RBP8.57□□□□□ -1.04
TSC2-202ENST00000350773 TNP1P09430 55 aa8.55□□□□□ -1.04
TSC2-202ENST00000350773 H0YAA0 97 aa8.54□□□□□ -1.04
TSC2-202ENST00000350773 TENM4Q6N022 2769 aa8.53□□□□□ -1.04
TSC2-202ENST00000350773 NIPBLQ6KC79 2804 aaeCLIP8.52□□□□□ -1.05
TSC2-202ENST00000350773 RELNP78509 3460 aa8.51□□□□□ -1.05
TSC2-202ENST00000350773 LAMA5O15230 3695 aa8.5□□□□□ -1.05
TSC2-202ENST00000350773 CRYBG3Q68DQ2 2970 aa8.49□□□□□ -1.05
TSC2-202ENST00000350773 XP32Q5T750 250 aa8.49□□□□□ -1.05
TSC2-202ENST00000350773 CELSR2Q9HCU4 2923 aa8.47□□□□□ -1.05
TSC2-202ENST00000350773 KRTAP21-3Q3LHN1 58 aa8.46□□□□□ -1.06
TSC2-202ENST00000350773 ASPMQ8IZT6 3477 aa8.46□□□□□ -1.06
TSC2-202ENST00000350773 PP632Q6XCG6 107 aa8.45□□□□□ -1.06
TSC2-202ENST00000350773 MUC3AQ02505 3323 aa8.44□□□□□ -1.06
TSC2-202ENST00000350773 ZFHX4Q86UP3 3567 aa8.43□□□□□ -1.06
TSC2-202ENST00000350773 C10orf95Q9H7T3 257 aa8.43□□□□□ -1.06
TSC2-202ENST00000350773 DCHS2Q6V1P9 2916 aa8.41□□□□□ -1.06
TSC2-202ENST00000350773 FBN2P35556 2912 aa8.39□□□□□ -1.07
TSC2-202ENST00000350773 KRTAP13-3Q3SY46 172 aa8.34□□□□□ -1.07
TSC2-202ENST00000350773 NF1P21359 2839 aa8.34□□□□□ -1.07
TSC2-202ENST00000350773 DCHS1Q96JQ0 3298 aa8.32□□□□□ -1.08
TSC2-202ENST00000350773 P0C880 135 aa8.31□□□□□ -1.08
TSC2-202ENST00000350773 MXRA5Q9NR99 2828 aa8.29□□□□□ -1.08
TSC2-202ENST00000350773 TPRXLQ17RH7 258 aa8.28□□□□□ -1.08
TSC2-202ENST00000350773 SMG1Q96Q15 3661 aaKnown RBP8.23□□□□□ -1.09
TSC2-202ENST00000350773 KRTAP10-8P60410 259 aa8.18□□□□□ -1.1
TSC2-202ENST00000350773 PDZD2O15018 2839 aa8.16□□□□□ -1.1
TSC2-202ENST00000350773 A0A1B0GVY2 172 aa8.14□□□□□ -1.11
TSC2-202ENST00000350773 CSMD1Q96PZ7 3565 aa8.12□□□□□ -1.11
TSC2-202ENST00000350773 TENM3Q9P273 2699 aa8.1□□□□□ -1.11
TSC2-202ENST00000350773 NBPF19A0A087WUL8 3843 aa8.07□□□□□ -1.12
TSC2-202ENST00000350773 BSNQ9UPA5 3926 aa8.05□□□□□ -1.12
TSC2-202ENST00000350773 CELSR1Q9NYQ6 3014 aa8.04□□□□□ -1.12
TSC2-202ENST00000350773 SPENQ96T58 3664 aaKnown RBP8.03□□□□□ -1.12
TSC2-202ENST00000350773 TGP01266 2768 aa8.02□□□□□ -1.13
TSC2-202ENST00000350773 TENM1Q9UKZ4 2725 aa8.02□□□□□ -1.13
TSC2-202ENST00000350773 KRTAP12-2P59991 146 aa7.98□□□□□ -1.13
TSC2-202ENST00000350773 ANK3Q12955 4377 aaKnown RBP7.98□□□□□ -1.13
TSC2-202ENST00000350773 SVEP1Q4LDE5 3571 aa7.97□□□□□ -1.13
TSC2-202ENST00000350773 KRTAP10-10P60014 251 aa7.95□□□□□ -1.14
TSC2-202ENST00000350773 OTOGQ6ZRI0 2925 aa7.93□□□□□ -1.14
TSC2-202ENST00000350773 TENM2Q9NT68 2774 aa7.89□□□□□ -1.15
TSC2-202ENST00000350773 PRO2289Q9P1D8 64 aa7.89□□□□□ -1.15
TSC2-202ENST00000350773 KRTAP3-1Q9BYR8 98 aa7.87□□□□□ -1.15
TSC2-202ENST00000350773 KRTAP12-1P59990 96 aa7.86□□□□□ -1.15
TSC2-202ENST00000350773 PKD1L1Q8TDX9 2849 aa7.84□□□□□ -1.15
TSC2-202ENST00000350773 KRTAP13-4Q3LI77 160 aa7.83□□□□□ -1.16
TSC2-202ENST00000350773 VWFP04275 2813 aa7.78□□□□□ -1.16
TSC2-202ENST00000350773 CSMD2Q7Z408 3487 aa7.75□□□□□ -1.17
TSC2-202ENST00000350773 ZFHX3Q15911 3703 aa7.71□□□□□ -1.18
TSC2-202ENST00000350773 FBN1P35555 2871 aaKnown RBP7.69□□□□□ -1.18
TSC2-202ENST00000350773 KRTAP10-6P60371 365 aaPredicted RBP7.67□□□□□ -1.18
TSC2-202ENST00000350773 TRRAPQ9Y4A5 3859 aa7.6□□□□□ -1.19
TSC2-202ENST00000350773 CUBNO60494 3623 aa7.54□□□□□ -1.2
TSC2-202ENST00000350773 VPS13CQ709C8 3753 aa7.5□□□□□ -1.21
TSC2-202ENST00000350773 SRRM2Q9UQ35 2752 aaKnown RBP7.45□□□□□ -1.22
TSC2-202ENST00000350773 HUWE1Q7Z6Z7 4374 aaKnown RBP7.42□□□□□ -1.22
TSC2-202ENST00000350773 KRTAP3-2Q9BYR7 98 aa7.41□□□□□ -1.22
TSC2-202ENST00000350773 KRTAP3-3Q9BYR6 98 aa7.39□□□□□ -1.23
TSC2-202ENST00000350773 KRTAP15-1Q3LI76 137 aa7.38□□□□□ -1.23
TSC2-202ENST00000350773 ZNF469Q96JG9 3925 aaPredicted RBP7.36□□□□□ -1.23
TSC2-202ENST00000350773 AKAP9Q99996 3911 aa7.34□□□□□ -1.23
TSC2-202ENST00000350773 FBN3Q75N90 2809 aa7.34□□□□□ -1.24
TSC2-202ENST00000350773 MT1HL1P0DM35 61 aa7.3□□□□□ -1.24
TSC2-202ENST00000350773 MEGF8Q7Z7M0 2845 aa7.26□□□□□ -1.25
TSC2-202ENST00000350773 KRTAP10-4P60372 401 aaPredicted RBP7.21□□□□□ -1.26
TSC2-202ENST00000350773 INE1O15225 51 aa7.15□□□□□ -1.26
TSC2-202ENST00000350773 DNAH9Q9NYC9 4486 aa7.12□□□□□ -1.27
TSC2-202ENST00000350773 ALMS1Q8TCU4 4167 aa7.07□□□□□ -1.28
TSC2-202ENST00000350773 KRTAP10-12P60413 245 aa7.05□□□□□ -1.28
TSC2-202ENST00000350773 COL7A1Q02388 2944 aa7.05□□□□□ -1.28
TSC2-202ENST00000350773 KRTAP23-1A1A580 65 aa7.05□□□□□ -1.28
TSC2-202ENST00000350773 PLECQ15149 4684 aaKnown RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms