RNA–Protein interactions for RNA: ENST00000347598.8

CACNA1C-204, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,655 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-204ENST00000347598 ITPR1Q14643 2758 aa6.2□□□□□ -1.42
CACNA1C-204ENST00000347598 WDFY3Q8IZQ1 3526 aa6.19□□□□□ -1.42
CACNA1C-204ENST00000347598 H0YAA0 97 aa6.18□□□□□ -1.42
CACNA1C-204ENST00000347598 TEX15Q9BXT5 2789 aa6.16□□□□□ -1.42
CACNA1C-204ENST00000347598 KRTAP1-4P0C5Y4 121 aa6.16□□□□□ -1.42
CACNA1C-204ENST00000347598 BAHCC1Q9P281 2608 aa6.16□□□□□ -1.42
CACNA1C-204ENST00000347598 GCN1Q92616 2671 aaKnown RBP6.15□□□□□ -1.42
CACNA1C-204ENST00000347598 UBR5O95071 2799 aaPredicted RBP6.15□□□□□ -1.43
CACNA1C-204ENST00000347598 FRYQ5TBA9 3013 aa6.14□□□□□ -1.43
CACNA1C-204ENST00000347598 FRYLO94915 3013 aa6.14□□□□□ -1.43
CACNA1C-204ENST00000347598 DMXL2Q8TDJ6 3036 aa6.14□□□□□ -1.43
CACNA1C-204ENST00000347598 DMXL1Q9Y485 3027 aa6.13□□□□□ -1.43
CACNA1C-204ENST00000347598 KALRNO60229 2985 aa6.13□□□□□ -1.43
CACNA1C-204ENST00000347598 TEP1Q99973 2627 aaKnown RBP6.1□□□□□ -1.43
CACNA1C-204ENST00000347598 KMT2BQ9UMN6 2715 aaPredicted RBP6.08□□□□□ -1.44
CACNA1C-204ENST00000347598 KRTAP13-3Q3SY46 172 aa6.06□□□□□ -1.44
CACNA1C-204ENST00000347598 ATMQ13315 3056 aa6.06□□□□□ -1.44
CACNA1C-204ENST00000347598 ITPR2Q14571 2701 aa6.06□□□□□ -1.44
CACNA1C-204ENST00000347598 STAB2Q8WWQ8 2551 aa6.06□□□□□ -1.44
CACNA1C-204ENST00000347598 MAP1AP78559 2803 aaPredicted RBP6.02□□□□□ -1.45
CACNA1C-204ENST00000347598 COL6A5A8TX70 2615 aa6.01□□□□□ -1.45
CACNA1C-204ENST00000347598 ASPMQ8IZT6 3477 aa6.01□□□□□ -1.45
CACNA1C-204ENST00000347598 ZZEF1O43149 2961 aa6□□□□□ -1.45
CACNA1C-204ENST00000347598 COL12A1Q99715 3063 aa6□□□□□ -1.45
CACNA1C-204ENST00000347598 CFAP47Q6ZTR5 3102 aa5.98□□□□□ -1.45
CACNA1C-204ENST00000347598 APCP25054 2843 aa5.98□□□□□ -1.45
CACNA1C-204ENST00000347598 BOD1L1Q8NFC6 3051 aa5.98□□□□□ -1.45
CACNA1C-204ENST00000347598 KRTAP12-2P59991 146 aa5.97□□□□□ -1.45
CACNA1C-204ENST00000347598 NSD1Q96L73 2696 aaPredicted RBP5.96□□□□□ -1.46
CACNA1C-204ENST00000347598 HIVEP1P15822 2718 aa5.95□□□□□ -1.46
CACNA1C-204ENST00000347598 ZFHX4Q86UP3 3567 aa5.95□□□□□ -1.46
CACNA1C-204ENST00000347598 DMDP11532 3685 aa5.94□□□□□ -1.46
CACNA1C-204ENST00000347598 NBEAQ8NFP9 2946 aa5.94□□□□□ -1.46
CACNA1C-204ENST00000347598 MUC3AQ02505 3323 aa5.94□□□□□ -1.46
CACNA1C-204ENST00000347598 SETXQ7Z333 2677 aaKnown RBP5.93□□□□□ -1.46
CACNA1C-204ENST00000347598 ADGRG4Q8IZF6 3080 aa5.9□□□□□ -1.47
CACNA1C-204ENST00000347598 UTP20O75691 2785 aaKnown RBP5.88□□□□□ -1.47
CACNA1C-204ENST00000347598 NBEAL2Q6ZNJ1 2754 aa5.88□□□□□ -1.47
CACNA1C-204ENST00000347598 KRTAP15-1Q3LI76 137 aa5.87□□□□□ -1.47
CACNA1C-204ENST00000347598 DCHS1Q96JQ0 3298 aa5.87□□□□□ -1.47
CACNA1C-204ENST00000347598 ASH1LQ9NR48 2969 aaKnown RBP5.85□□□□□ -1.47
CACNA1C-204ENST00000347598 NOTCH1P46531 2555 aa5.85□□□□□ -1.47
CACNA1C-204ENST00000347598 KRTAP13-4Q3LI77 160 aa5.85□□□□□ -1.47
CACNA1C-204ENST00000347598 LOC400499M0QZD8 3231 aa5.84□□□□□ -1.47
CACNA1C-204ENST00000347598 TENM4Q6N022 2769 aa5.83□□□□□ -1.48
CACNA1C-204ENST00000347598 HRNRQ86YZ3 2850 aaPredicted RBP5.83□□□□□ -1.48
CACNA1C-204ENST00000347598 LAMA5O15230 3695 aa5.83□□□□□ -1.48
CACNA1C-204ENST00000347598 LRBAP50851 2863 aa5.82□□□□□ -1.48
CACNA1C-204ENST00000347598 TACC2O95359 2948 aa5.82□□□□□ -1.48
CACNA1C-204ENST00000347598 ZANQ9Y493 2812 aa5.82□□□□□ -1.48
CACNA1C-204ENST00000347598 CRYBG3Q68DQ2 2970 aa5.81□□□□□ -1.48
CACNA1C-204ENST00000347598 CSMD1Q96PZ7 3565 aa5.75□□□□□ -1.49
CACNA1C-204ENST00000347598 CRCT1Q9UGL9 99 aa5.75□□□□□ -1.49
CACNA1C-204ENST00000347598 CELSR2Q9HCU4 2923 aa5.74□□□□□ -1.49
CACNA1C-204ENST00000347598 FBN2P35556 2912 aa5.72□□□□□ -1.49
CACNA1C-204ENST00000347598 RELNP78509 3460 aa5.72□□□□□ -1.49
CACNA1C-204ENST00000347598 NIPBLQ6KC79 2804 aaeCLIP5.71□□□□□ -1.49
CACNA1C-204ENST00000347598 KRTAP12-1P59990 96 aa5.7□□□□□ -1.5
CACNA1C-204ENST00000347598 SMG1Q96Q15 3661 aaKnown RBP5.7□□□□□ -1.5
CACNA1C-204ENST00000347598 PDZD2O15018 2839 aa5.68□□□□□ -1.5
CACNA1C-204ENST00000347598 DCHS2Q6V1P9 2916 aa5.66□□□□□ -1.5
CACNA1C-204ENST00000347598 OTOGQ6ZRI0 2925 aa5.64□□□□□ -1.51
CACNA1C-204ENST00000347598 MXRA5Q9NR99 2828 aa5.63□□□□□ -1.51
CACNA1C-204ENST00000347598 SVEP1Q4LDE5 3571 aa5.62□□□□□ -1.51
CACNA1C-204ENST00000347598 NF1P21359 2839 aa5.62□□□□□ -1.51
CACNA1C-204ENST00000347598 CUBNO60494 3623 aa5.52□□□□□ -1.53
CACNA1C-204ENST00000347598 SPENQ96T58 3664 aaKnown RBP5.52□□□□□ -1.53
CACNA1C-204ENST00000347598 TENM1Q9UKZ4 2725 aa5.48□□□□□ -1.53
CACNA1C-204ENST00000347598 KRTAP10-12P60413 245 aa5.47□□□□□ -1.53
CACNA1C-204ENST00000347598 KRTAP3-1Q9BYR8 98 aa5.47□□□□□ -1.53
CACNA1C-204ENST00000347598 INE1O15225 51 aa5.43□□□□□ -1.54
CACNA1C-204ENST00000347598 NBPF19A0A087WUL8 3843 aa5.41□□□□□ -1.54
CACNA1C-204ENST00000347598 TENM2Q9NT68 2774 aa5.34□□□□□ -1.55
CACNA1C-204ENST00000347598 VWFP04275 2813 aa5.34□□□□□ -1.56
CACNA1C-204ENST00000347598 ZFHX3Q15911 3703 aa5.33□□□□□ -1.56
CACNA1C-204ENST00000347598 TGP01266 2768 aa5.33□□□□□ -1.56
CACNA1C-204ENST00000347598 KRTAP10-6P60371 365 aaPredicted RBP5.32□□□□□ -1.56
CACNA1C-204ENST00000347598 TENM3Q9P273 2699 aa5.31□□□□□ -1.56
CACNA1C-204ENST00000347598 CELSR1Q9NYQ6 3014 aa5.29□□□□□ -1.56
CACNA1C-204ENST00000347598 CSMD2Q7Z408 3487 aa5.28□□□□□ -1.56
CACNA1C-204ENST00000347598 BSNQ9UPA5 3926 aa5.28□□□□□ -1.56
CACNA1C-204ENST00000347598 FBN1P35555 2871 aaKnown RBP5.25□□□□□ -1.57
CACNA1C-204ENST00000347598 KRTAP12-3P60328 96 aa5.25□□□□□ -1.57
CACNA1C-204ENST00000347598 VPS13CQ709C8 3753 aa5.25□□□□□ -1.57
CACNA1C-204ENST00000347598 ANK3Q12955 4377 aaKnown RBP5.24□□□□□ -1.57
CACNA1C-204ENST00000347598 KRTAP10-5P60370 271 aa5.21□□□□□ -1.57
CACNA1C-204ENST00000347598 LCE3AQ5TA76 89 aa5.2□□□□□ -1.58
CACNA1C-204ENST00000347598 FBN3Q75N90 2809 aa5.19□□□□□ -1.58
CACNA1C-204ENST00000347598 PKD1L1Q8TDX9 2849 aa5.18□□□□□ -1.58
CACNA1C-204ENST00000347598 MT1HL1P0DM35 61 aa5.17□□□□□ -1.58
CACNA1C-204ENST00000347598 KRTAP8-1Q8IUC2 63 aa5.16□□□□□ -1.58
CACNA1C-204ENST00000347598 LORP23490 312 aaPredicted RBP5.13□□□□□ -1.59
CACNA1C-204ENST00000347598 KRTAP4-5Q9BYR2 181 aa5.12□□□□□ -1.59
CACNA1C-204ENST00000347598 KRTAP3-3Q9BYR6 98 aa5.09□□□□□ -1.6
CACNA1C-204ENST00000347598 KRTAP3-2Q9BYR7 98 aa5.08□□□□□ -1.6
CACNA1C-204ENST00000347598 MEGF8Q7Z7M0 2845 aa5.04□□□□□ -1.6
CACNA1C-204ENST00000347598 KRTAP23-1A1A580 65 aa4.98□□□□□ -1.61
CACNA1C-204ENST00000347598 ALMS1Q8TCU4 4167 aa4.95□□□□□ -1.62
CACNA1C-204ENST00000347598 DNHD1Q96M86 4753 aa4.94□□□□□ -1.62
CACNA1C-204ENST00000347598 AKAP9Q99996 3911 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms