RNA–Protein interactions for RNA: ENST00000344876.8

PCDH18-201, Transcript of protocadherin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDH18, Length 5,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18-201ENST00000344876 PRO2289Q9P1D8 64 aa3.59□□□□□ -1.84
PCDH18-201ENST00000344876 HTTP42858 3142 aa3.59□□□□□ -1.84
PCDH18-201ENST00000344876 HIVEP1P15822 2718 aa3.58□□□□□ -1.84
PCDH18-201ENST00000344876 KRTAP10-8P60410 259 aa3.58□□□□□ -1.84
PCDH18-201ENST00000344876 CRYBG3Q68DQ2 2970 aa3.58□□□□□ -1.84
PCDH18-201ENST00000344876 CHD9Q3L8U1 2897 aa3.58□□□□□ -1.84
PCDH18-201ENST00000344876 UTP20O75691 2785 aaKnown RBP3.57□□□□□ -1.84
PCDH18-201ENST00000344876 NBEAQ8NFP9 2946 aa3.57□□□□□ -1.84
PCDH18-201ENST00000344876 A0A1B0GVY2 172 aa3.57□□□□□ -1.84
PCDH18-201ENST00000344876 H0YAA0 97 aa3.57□□□□□ -1.84
PCDH18-201ENST00000344876 LRBAP50851 2863 aa3.57□□□□□ -1.84
PCDH18-201ENST00000344876 VCANP13611 3396 aa3.56□□□□□ -1.84
PCDH18-201ENST00000344876 COL12A1Q99715 3063 aa3.56□□□□□ -1.84
PCDH18-201ENST00000344876 LAMA1P25391 3075 aa3.56□□□□□ -1.84
PCDH18-201ENST00000344876 Q6ZRN7 208 aaPredicted RBP3.55□□□□□ -1.84
PCDH18-201ENST00000344876 BOD1L1Q8NFC6 3051 aa3.54□□□□□ -1.84
PCDH18-201ENST00000344876 SZT2Q5T011 3432 aa3.54□□□□□ -1.84
PCDH18-201ENST00000344876 COL6A3P12111 3177 aa3.53□□□□□ -1.84
PCDH18-201ENST00000344876 KRTAP13-1Q8IUC0 172 aa3.52□□□□□ -1.85
PCDH18-201ENST00000344876 ATMQ13315 3056 aa3.5□□□□□ -1.85
PCDH18-201ENST00000344876 SPEGQ15772 3267 aa3.5□□□□□ -1.85
PCDH18-201ENST00000344876 ITPR2Q14571 2701 aa3.5□□□□□ -1.85
PCDH18-201ENST00000344876 RPS29P62273 56 aaKnown RBP3.49□□□□□ -1.85
PCDH18-201ENST00000344876 FRYLO94915 3013 aa3.48□□□□□ -1.85
PCDH18-201ENST00000344876 CELSR2Q9HCU4 2923 aa3.48□□□□□ -1.85
PCDH18-201ENST00000344876 ADGRG4Q8IZF6 3080 aa3.48□□□□□ -1.85
PCDH18-201ENST00000344876 KRTAP15-1Q3LI76 137 aa3.46□□□□□ -1.86
PCDH18-201ENST00000344876 ZZEF1O43149 2961 aa3.44□□□□□ -1.86
PCDH18-201ENST00000344876 TPRXLQ17RH7 258 aa3.42□□□□□ -1.86
PCDH18-201ENST00000344876 XP32Q5T750 250 aa3.41□□□□□ -1.86
PCDH18-201ENST00000344876 DCHS2Q6V1P9 2916 aa3.4□□□□□ -1.87
PCDH18-201ENST00000344876 TENM4Q6N022 2769 aa3.39□□□□□ -1.87
PCDH18-201ENST00000344876 KRTAP10-10P60014 251 aa3.38□□□□□ -1.87
PCDH18-201ENST00000344876 FLNCQ14315 2725 aa3.37□□□□□ -1.87
PCDH18-201ENST00000344876 TNRC18O15417 2968 aaPredicted RBP3.37□□□□□ -1.87
PCDH18-201ENST00000344876 KRTAP1-4P0C5Y4 121 aa3.37□□□□□ -1.87
PCDH18-201ENST00000344876 TENM3Q9P273 2699 aa3.34□□□□□ -1.87
PCDH18-201ENST00000344876 DMXL1Q9Y485 3027 aa3.34□□□□□ -1.87
PCDH18-201ENST00000344876 EYSQ5T1H1 3165 aa3.34□□□□□ -1.87
PCDH18-201ENST00000344876 MYO15AQ9UKN7 3530 aa3.34□□□□□ -1.88
PCDH18-201ENST00000344876 NF1P21359 2839 aa3.34□□□□□ -1.88
PCDH18-201ENST00000344876 TGP01266 2768 aa3.33□□□□□ -1.88
PCDH18-201ENST00000344876 TENM1Q9UKZ4 2725 aa3.32□□□□□ -1.88
PCDH18-201ENST00000344876 KRTAP12-2P59991 146 aa3.32□□□□□ -1.88
PCDH18-201ENST00000344876 CELSR1Q9NYQ6 3014 aa3.3□□□□□ -1.88
PCDH18-201ENST00000344876 LOC400499M0QZD8 3231 aa3.3□□□□□ -1.88
PCDH18-201ENST00000344876 NIPBLQ6KC79 2804 aaeCLIP3.29□□□□□ -1.88
PCDH18-201ENST00000344876 USP34Q70CQ2 3546 aa3.29□□□□□ -1.88
PCDH18-201ENST00000344876 FBN2P35556 2912 aa3.28□□□□□ -1.88
PCDH18-201ENST00000344876 ZANQ9Y493 2812 aa3.27□□□□□ -1.89
PCDH18-201ENST00000344876 PDZD2O15018 2839 aa3.26□□□□□ -1.89
PCDH18-201ENST00000344876 ASPMQ8IZT6 3477 aa3.26□□□□□ -1.89
PCDH18-201ENST00000344876 KRTAP21-3Q3LHN1 58 aa3.25□□□□□ -1.89
PCDH18-201ENST00000344876 PKD1L1Q8TDX9 2849 aa3.25□□□□□ -1.89
PCDH18-201ENST00000344876 TENM2Q9NT68 2774 aa3.24□□□□□ -1.89
PCDH18-201ENST00000344876 WDFY3Q8IZQ1 3526 aa3.24□□□□□ -1.89
PCDH18-201ENST00000344876 VWFP04275 2813 aa3.24□□□□□ -1.89
PCDH18-201ENST00000344876 SPTBN5Q9NRC6 3674 aaKnown RBP3.24□□□□□ -1.89
PCDH18-201ENST00000344876 KRTAP13-3Q3SY46 172 aa3.23□□□□□ -1.89
PCDH18-201ENST00000344876 ZFHX4Q86UP3 3567 aa3.22□□□□□ -1.89
PCDH18-201ENST00000344876 DCHS1Q96JQ0 3298 aa3.21□□□□□ -1.9
PCDH18-201ENST00000344876 KRTAP13-4Q3LI77 160 aa3.2□□□□□ -1.9
PCDH18-201ENST00000344876 KRTAP12-1P59990 96 aa3.2□□□□□ -1.9
PCDH18-201ENST00000344876 KRTAP17-1Q9BYP8 105 aa3.19□□□□□ -1.9
PCDH18-201ENST00000344876 CSMD1Q96PZ7 3565 aa3.15□□□□□ -1.9
PCDH18-201ENST00000344876 RELNP78509 3460 aa3.15□□□□□ -1.91
PCDH18-201ENST00000344876 SRRM2Q9UQ35 2752 aaKnown RBP3.14□□□□□ -1.91
PCDH18-201ENST00000344876 HRNRQ86YZ3 2850 aaPredicted RBP3.13□□□□□ -1.91
PCDH18-201ENST00000344876 KRTAP3-1Q9BYR8 98 aa3.12□□□□□ -1.91
PCDH18-201ENST00000344876 CRCT1Q9UGL9 99 aa3.12□□□□□ -1.91
PCDH18-201ENST00000344876 CUBNO60494 3623 aa3.12□□□□□ -1.91
PCDH18-201ENST00000344876 MXRA5Q9NR99 2828 aa3.1□□□□□ -1.91
PCDH18-201ENST00000344876 LAMA5O15230 3695 aa3.08□□□□□ -1.92
PCDH18-201ENST00000344876 KRTAP10-6P60371 365 aaPredicted RBP3.04□□□□□ -1.92
PCDH18-201ENST00000344876 NBPF19A0A087WUL8 3843 aa3.01□□□□□ -1.93
PCDH18-201ENST00000344876 SMG1Q96Q15 3661 aaKnown RBP3.01□□□□□ -1.93
PCDH18-201ENST00000344876 SVEP1Q4LDE5 3571 aa2.99□□□□□ -1.93
PCDH18-201ENST00000344876 FBN1P35555 2871 aaKnown RBP2.99□□□□□ -1.93
PCDH18-201ENST00000344876 FBN3Q75N90 2809 aa2.99□□□□□ -1.93
PCDH18-201ENST00000344876 MEGF8Q7Z7M0 2845 aa2.99□□□□□ -1.93
PCDH18-201ENST00000344876 COL7A1Q02388 2944 aa2.97□□□□□ -1.93
PCDH18-201ENST00000344876 ZFHX3Q15911 3703 aa2.96□□□□□ -1.94
PCDH18-201ENST00000344876 KRTAP10-12P60413 245 aa2.91□□□□□ -1.94
PCDH18-201ENST00000344876 KRTAP3-3Q9BYR6 98 aa2.91□□□□□ -1.94
PCDH18-201ENST00000344876 KRTAP3-2Q9BYR7 98 aa2.91□□□□□ -1.94
PCDH18-201ENST00000344876 CSMD2Q7Z408 3487 aa2.9□□□□□ -1.95
PCDH18-201ENST00000344876 DMDP11532 3685 aa2.9□□□□□ -1.95
PCDH18-201ENST00000344876 SPENQ96T58 3664 aaKnown RBP2.89□□□□□ -1.95
PCDH18-201ENST00000344876 MUC3AQ02505 3323 aa2.88□□□□□ -1.95
PCDH18-201ENST00000344876 OTOGQ6ZRI0 2925 aa2.86□□□□□ -1.95
PCDH18-201ENST00000344876 LCE3AQ5TA76 89 aa2.86□□□□□ -1.95
PCDH18-201ENST00000344876 KRTAP12-3P60328 96 aa2.85□□□□□ -1.95
PCDH18-201ENST00000344876 KRTAP10-5P60370 271 aa2.84□□□□□ -1.95
PCDH18-201ENST00000344876 LORP23490 312 aaPredicted RBP2.82□□□□□ -1.96
PCDH18-201ENST00000344876 CSMD3Q7Z407 3707 aa2.81□□□□□ -1.96
PCDH18-201ENST00000344876 TRRAPQ9Y4A5 3859 aa2.79□□□□□ -1.96
PCDH18-201ENST00000344876 MT1HL1P0DM35 61 aa2.79□□□□□ -1.96
PCDH18-201ENST00000344876 KRTAP4-5Q9BYR2 181 aa2.77□□□□□ -1.97
PCDH18-201ENST00000344876 KRTAP19-4Q3LI73 84 aa2.73□□□□□ -1.97
PCDH18-201ENST00000344876 ANK3Q12955 4377 aaKnown RBP2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms