RNA–Protein interactions for RNA: ENST00000344691.8

RUNX1-202, Transcript of runt related transcription factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RUNX1, Length 7,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-202ENST00000344691 KRTAP16-1A8MUX0 517 aa8.69□□□□□ -1.02
RUNX1-202ENST00000344691 COL12A1Q99715 3063 aa8.68□□□□□ -1.02
RUNX1-202ENST00000344691 NDUFAF8A1L188 74 aa8.65□□□□□ -1.02
RUNX1-202ENST00000344691 APCP25054 2843 aa8.65□□□□□ -1.02
RUNX1-202ENST00000344691 ITPR2Q14571 2701 aa8.62□□□□□ -1.03
RUNX1-202ENST00000344691 ZZEF1O43149 2961 aa8.62□□□□□ -1.03
RUNX1-202ENST00000344691 KRTAP4-16G5E9R7 235 aaPredicted RBP8.61□□□□□ -1.03
RUNX1-202ENST00000344691 KRTAP25-1Q3LHN0 102 aa8.59□□□□□ -1.03
RUNX1-202ENST00000344691 TACC2O95359 2948 aa8.59□□□□□ -1.03
RUNX1-202ENST00000344691 KRTAP29-1A8MX34 341 aaPredicted RBP8.58□□□□□ -1.04
RUNX1-202ENST00000344691 LAMA5O15230 3695 aa8.58□□□□□ -1.04
RUNX1-202ENST00000344691 ZNF292O60281 2723 aa8.56□□□□□ -1.04
RUNX1-202ENST00000344691 KRTAP10-8P60410 259 aa8.53□□□□□ -1.04
RUNX1-202ENST00000344691 NBPF19A0A087WUL8 3843 aa8.51□□□□□ -1.05
RUNX1-202ENST00000344691 KRTAP13-2Q52LG2 175 aa8.51□□□□□ -1.05
RUNX1-202ENST00000344691 TNP1P09430 55 aa8.5□□□□□ -1.05
RUNX1-202ENST00000344691 TNRC18O15417 2968 aaPredicted RBP8.47□□□□□ -1.05
RUNX1-202ENST00000344691 KMT2BQ9UMN6 2715 aaPredicted RBP8.46□□□□□ -1.05
RUNX1-202ENST00000344691 NSD1Q96L73 2696 aaPredicted RBP8.45□□□□□ -1.06
RUNX1-202ENST00000344691 KRTAP7-1Q8IUC3 87 aa8.44□□□□□ -1.06
RUNX1-202ENST00000344691 HIVEP1P15822 2718 aa8.42□□□□□ -1.06
RUNX1-202ENST00000344691 CSMD1Q96PZ7 3565 aa8.42□□□□□ -1.06
RUNX1-202ENST00000344691 UTP20O75691 2785 aaKnown RBP8.42□□□□□ -1.06
RUNX1-202ENST00000344691 Q6ZRN7 208 aaPredicted RBP8.39□□□□□ -1.07
RUNX1-202ENST00000344691 ZFHX4Q86UP3 3567 aa8.39□□□□□ -1.07
RUNX1-202ENST00000344691 NBEAQ8NFP9 2946 aa8.39□□□□□ -1.07
RUNX1-202ENST00000344691 UBR5O95071 2799 aaPredicted RBP8.38□□□□□ -1.07
RUNX1-202ENST00000344691 A6NN06 94 aa8.38□□□□□ -1.07
RUNX1-202ENST00000344691 P0C880 135 aa8.36□□□□□ -1.07
RUNX1-202ENST00000344691 RELNP78509 3460 aa8.34□□□□□ -1.07
RUNX1-202ENST00000344691 DMXL1Q9Y485 3027 aa8.33□□□□□ -1.08
RUNX1-202ENST00000344691 IGSF10Q6WRI0 2623 aa8.31□□□□□ -1.08
RUNX1-202ENST00000344691 ITPR1Q14643 2758 aa8.29□□□□□ -1.08
RUNX1-202ENST00000344691 ASB16-AS1Q495Z4 193 aa8.28□□□□□ -1.08
RUNX1-202ENST00000344691 KRTAP10-10P60014 251 aa8.25□□□□□ -1.09
RUNX1-202ENST00000344691 RPS29P62273 56 aaKnown RBP8.24□□□□□ -1.09
RUNX1-202ENST00000344691 CELSR2Q9HCU4 2923 aa8.23□□□□□ -1.09
RUNX1-202ENST00000344691 KRTAP13-1Q8IUC0 172 aa8.17□□□□□ -1.1
RUNX1-202ENST00000344691 SPENQ96T58 3664 aaKnown RBP8.14□□□□□ -1.11
RUNX1-202ENST00000344691 CELSR1Q9NYQ6 3014 aa8.14□□□□□ -1.11
RUNX1-202ENST00000344691 CUBNO60494 3623 aa8.13□□□□□ -1.11
RUNX1-202ENST00000344691 XP32Q5T750 250 aa8.12□□□□□ -1.11
RUNX1-202ENST00000344691 SMG1Q96Q15 3661 aaKnown RBP8.08□□□□□ -1.12
RUNX1-202ENST00000344691 DMDP11532 3685 aa8.07□□□□□ -1.12
RUNX1-202ENST00000344691 H0YAA0 97 aa8.02□□□□□ -1.13
RUNX1-202ENST00000344691 DCHS2Q6V1P9 2916 aa8.02□□□□□ -1.13
RUNX1-202ENST00000344691 SVEP1Q4LDE5 3571 aa7.97□□□□□ -1.13
RUNX1-202ENST00000344691 TENM1Q9UKZ4 2725 aa7.97□□□□□ -1.13
RUNX1-202ENST00000344691 FLNCQ14315 2725 aa7.96□□□□□ -1.14
RUNX1-202ENST00000344691 ZFHX3Q15911 3703 aa7.95□□□□□ -1.14
RUNX1-202ENST00000344691 PRO2289Q9P1D8 64 aa7.92□□□□□ -1.14
RUNX1-202ENST00000344691 KRTAP1-4P0C5Y4 121 aa7.9□□□□□ -1.14
RUNX1-202ENST00000344691 FBN2P35556 2912 aa7.89□□□□□ -1.15
RUNX1-202ENST00000344691 TENM4Q6N022 2769 aa7.88□□□□□ -1.15
RUNX1-202ENST00000344691 PP632Q6XCG6 107 aa7.88□□□□□ -1.15
RUNX1-202ENST00000344691 NF1P21359 2839 aa7.84□□□□□ -1.15
RUNX1-202ENST00000344691 NIPBLQ6KC79 2804 aaeCLIP7.81□□□□□ -1.167e-6■■□□□ 12.9
RUNX1-202ENST00000344691 PKD1L1Q8TDX9 2849 aa7.79□□□□□ -1.16
RUNX1-202ENST00000344691 TPRXLQ17RH7 258 aa7.77□□□□□ -1.17
RUNX1-202ENST00000344691 VWFP04275 2813 aa7.77□□□□□ -1.17
RUNX1-202ENST00000344691 TENM2Q9NT68 2774 aa7.75□□□□□ -1.17
RUNX1-202ENST00000344691 CSMD2Q7Z408 3487 aa7.73□□□□□ -1.17
RUNX1-202ENST00000344691 ZANQ9Y493 2812 aa7.72□□□□□ -1.17
RUNX1-202ENST00000344691 TGP01266 2768 aa7.72□□□□□ -1.17
RUNX1-202ENST00000344691 KRTAP13-3Q3SY46 172 aa7.7□□□□□ -1.18
RUNX1-202ENST00000344691 KRTAP12-2P59991 146 aa7.68□□□□□ -1.18
RUNX1-202ENST00000344691 MUC3AQ02505 3323 aa7.67□□□□□ -1.18
RUNX1-202ENST00000344691 KRTAP21-3Q3LHN1 58 aa7.6□□□□□ -1.19
RUNX1-202ENST00000344691 HRNRQ86YZ3 2850 aaPredicted RBP7.6□□□□□ -1.19
RUNX1-202ENST00000344691 PDZD2O15018 2839 aa7.59□□□□□ -1.19
RUNX1-202ENST00000344691 CRCT1Q9UGL9 99 aa7.59□□□□□ -1.2
RUNX1-202ENST00000344691 TENM3Q9P273 2699 aa7.58□□□□□ -1.2
RUNX1-202ENST00000344691 MXRA5Q9NR99 2828 aa7.5□□□□□ -1.21
RUNX1-202ENST00000344691 KRTAP15-1Q3LI76 137 aa7.46□□□□□ -1.22
RUNX1-202ENST00000344691 VPS13CQ709C8 3753 aa7.43□□□□□ -1.22
RUNX1-202ENST00000344691 CSMD3Q7Z407 3707 aa7.43□□□□□ -1.22
RUNX1-202ENST00000344691 KRTAP12-1P59990 96 aa7.35□□□□□ -1.23
RUNX1-202ENST00000344691 KRTAP13-4Q3LI77 160 aa7.35□□□□□ -1.23
RUNX1-202ENST00000344691 TRRAPQ9Y4A5 3859 aa7.34□□□□□ -1.23
RUNX1-202ENST00000344691 BSNQ9UPA5 3926 aa7.28□□□□□ -1.24
RUNX1-202ENST00000344691 MEGF8Q7Z7M0 2845 aa7.19□□□□□ -1.26
RUNX1-202ENST00000344691 SRRM2Q9UQ35 2752 aaKnown RBP7.19□□□□□ -1.26
RUNX1-202ENST00000344691 COL7A1Q02388 2944 aa7.16□□□□□ -1.26
RUNX1-202ENST00000344691 FBN1P35555 2871 aaKnown RBP7.16□□□□□ -1.26
RUNX1-202ENST00000344691 KRTAP3-1Q9BYR8 98 aa7.13□□□□□ -1.27
RUNX1-202ENST00000344691 FBN3Q75N90 2809 aa7.04□□□□□ -1.28
RUNX1-202ENST00000344691 ANK3Q12955 4377 aaKnown RBP7.03□□□□□ -1.28
RUNX1-202ENST00000344691 KRTAP4-5Q9BYR2 181 aa6.93□□□□□ -1.3
RUNX1-202ENST00000344691 KRTAP10-12P60413 245 aa6.93□□□□□ -1.3
RUNX1-202ENST00000344691 KRTAP10-6P60371 365 aaPredicted RBP6.89□□□□□ -1.31
RUNX1-202ENST00000344691 AKAP9Q99996 3911 aa6.88□□□□□ -1.31
RUNX1-202ENST00000344691 OTOGQ6ZRI0 2925 aa6.87□□□□□ -1.31
RUNX1-202ENST00000344691 ZNF469Q96JG9 3925 aaPredicted RBP6.84□□□□□ -1.31
RUNX1-202ENST00000344691 HUWE1Q7Z6Z7 4374 aaKnown RBP6.83□□□□□ -1.32
RUNX1-202ENST00000344691 LORP23490 312 aaPredicted RBP6.75□□□□□ -1.33
RUNX1-202ENST00000344691 KRTAP10-5P60370 271 aa6.73□□□□□ -1.33
RUNX1-202ENST00000344691 LCE3AQ5TA76 89 aa6.72□□□□□ -1.33
RUNX1-202ENST00000344691 MT1HL1P0DM35 61 aa6.67□□□□□ -1.34
RUNX1-202ENST00000344691 KRTAP12-3P60328 96 aa6.67□□□□□ -1.34
RUNX1-202ENST00000344691 KRTAP3-3Q9BYR6 98 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms