RNA–Protein interactions for RNA: ENST00000342711.5

CDC42BPG-201, Transcript of CDC42 binding protein kinase gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPG, Length 5,742 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPG-201ENST00000342711 KRTAP21-3Q3LHN1 58 aa9.01□□□□□ -0.97
CDC42BPG-201ENST00000342711 TNRC18O15417 2968 aaPredicted RBP8.97□□□□□ -0.97
CDC42BPG-201ENST00000342711 FRYQ5TBA9 3013 aa8.94□□□□□ -0.98
CDC42BPG-201ENST00000342711 USP34Q70CQ2 3546 aa8.92□□□□□ -0.98
CDC42BPG-201ENST00000342711 FREM2Q5SZK8 3169 aa8.91□□□□□ -0.98
CDC42BPG-201ENST00000342711 ITPR2Q14571 2701 aa8.9□□□□□ -0.98
CDC42BPG-201ENST00000342711 MUC3AQ02505 3323 aa8.9□□□□□ -0.99
CDC42BPG-201ENST00000342711 FLNCQ14315 2725 aa8.87□□□□□ -0.99
CDC42BPG-201ENST00000342711 KMT2BQ9UMN6 2715 aaPredicted RBP8.87□□□□□ -0.99
CDC42BPG-201ENST00000342711 ITPR1Q14643 2758 aa8.86□□□□□ -0.99
CDC42BPG-201ENST00000342711 ATMQ13315 3056 aa8.81□□□□□ -1
CDC42BPG-201ENST00000342711 KALRNO60229 2985 aa8.78□□□□□ -1
CDC42BPG-201ENST00000342711 H0YAA0 97 aa8.78□□□□□ -1
CDC42BPG-201ENST00000342711 PP632Q6XCG6 107 aa8.77□□□□□ -1.01
CDC42BPG-201ENST00000342711 UTP20O75691 2785 aaKnown RBP8.75□□□□□ -1.01
CDC42BPG-201ENST00000342711 XP32Q5T750 250 aa8.75□□□□□ -1.01
CDC42BPG-201ENST00000342711 DMXL2Q8TDJ6 3036 aa8.74□□□□□ -1.01
CDC42BPG-201ENST00000342711 KRTAP1-4P0C5Y4 121 aa8.74□□□□□ -1.01
CDC42BPG-201ENST00000342711 KRTAP10-8P60410 259 aa8.74□□□□□ -1.01
CDC42BPG-201ENST00000342711 COL12A1Q99715 3063 aa8.72□□□□□ -1.01
CDC42BPG-201ENST00000342711 A0A1B0GVY2 172 aa8.72□□□□□ -1.01
CDC42BPG-201ENST00000342711 BOD1L1Q8NFC6 3051 aa8.72□□□□□ -1.01
CDC42BPG-201ENST00000342711 APCP25054 2843 aa8.71□□□□□ -1.01
CDC42BPG-201ENST00000342711 HIVEP1P15822 2718 aa8.71□□□□□ -1.01
CDC42BPG-201ENST00000342711 TACC2O95359 2948 aa8.69□□□□□ -1.02
CDC42BPG-201ENST00000342711 ADGRG4Q8IZF6 3080 aa8.68□□□□□ -1.02
CDC42BPG-201ENST00000342711 LRBAP50851 2863 aa8.67□□□□□ -1.02
CDC42BPG-201ENST00000342711 P0C880 135 aa8.66□□□□□ -1.02
CDC42BPG-201ENST00000342711 LOC400499M0QZD8 3231 aa8.61□□□□□ -1.03
CDC42BPG-201ENST00000342711 ASH1LQ9NR48 2969 aaKnown RBP8.61□□□□□ -1.03
CDC42BPG-201ENST00000342711 DMDP11532 3685 aa8.6□□□□□ -1.03
CDC42BPG-201ENST00000342711 WDFY3Q8IZQ1 3526 aa8.58□□□□□ -1.04
CDC42BPG-201ENST00000342711 NIPBLQ6KC79 2804 aaeCLIP8.58□□□□□ -1.04
CDC42BPG-201ENST00000342711 NBEAQ8NFP9 2946 aa8.57□□□□□ -1.04
CDC42BPG-201ENST00000342711 DMXL1Q9Y485 3027 aa8.57□□□□□ -1.04
CDC42BPG-201ENST00000342711 TENM4Q6N022 2769 aa8.51□□□□□ -1.05
CDC42BPG-201ENST00000342711 ASPMQ8IZT6 3477 aa8.51□□□□□ -1.05
CDC42BPG-201ENST00000342711 HRNRQ86YZ3 2850 aaPredicted RBP8.49□□□□□ -1.05
CDC42BPG-201ENST00000342711 TPRXLQ17RH7 258 aa8.49□□□□□ -1.05
CDC42BPG-201ENST00000342711 CFAP47Q6ZTR5 3102 aa8.48□□□□□ -1.05
CDC42BPG-201ENST00000342711 ZZEF1O43149 2961 aa8.48□□□□□ -1.05
CDC42BPG-201ENST00000342711 KRTAP10-10P60014 251 aa8.45□□□□□ -1.06
CDC42BPG-201ENST00000342711 CELSR2Q9HCU4 2923 aa8.45□□□□□ -1.06
CDC42BPG-201ENST00000342711 DCHS1Q96JQ0 3298 aa8.43□□□□□ -1.06
CDC42BPG-201ENST00000342711 CRYBG3Q68DQ2 2970 aa8.42□□□□□ -1.06
CDC42BPG-201ENST00000342711 LAMA5O15230 3695 aa8.41□□□□□ -1.06
CDC42BPG-201ENST00000342711 KRTAP13-3Q3SY46 172 aa8.4□□□□□ -1.07
CDC42BPG-201ENST00000342711 ZANQ9Y493 2812 aa8.36□□□□□ -1.07
CDC42BPG-201ENST00000342711 PRO2289Q9P1D8 64 aa8.34□□□□□ -1.07
CDC42BPG-201ENST00000342711 DCHS2Q6V1P9 2916 aa8.34□□□□□ -1.08
CDC42BPG-201ENST00000342711 KRTAP12-2P59991 146 aa8.26□□□□□ -1.09
CDC42BPG-201ENST00000342711 TENM3Q9P273 2699 aa8.22□□□□□ -1.09
CDC42BPG-201ENST00000342711 RELNP78509 3460 aa8.22□□□□□ -1.09
CDC42BPG-201ENST00000342711 ZFHX4Q86UP3 3567 aa8.21□□□□□ -1.1
CDC42BPG-201ENST00000342711 FBN2P35556 2912 aa8.13□□□□□ -1.11
CDC42BPG-201ENST00000342711 TENM1Q9UKZ4 2725 aa8.12□□□□□ -1.11
CDC42BPG-201ENST00000342711 TGP01266 2768 aa8.09□□□□□ -1.12
CDC42BPG-201ENST00000342711 KRTAP13-4Q3LI77 160 aa8.08□□□□□ -1.12
CDC42BPG-201ENST00000342711 NF1P21359 2839 aa8.07□□□□□ -1.12
CDC42BPG-201ENST00000342711 PDZD2O15018 2839 aa8.06□□□□□ -1.12
CDC42BPG-201ENST00000342711 KRTAP12-1P59990 96 aa8.06□□□□□ -1.12
CDC42BPG-201ENST00000342711 MXRA5Q9NR99 2828 aa8.01□□□□□ -1.13
CDC42BPG-201ENST00000342711 SMG1Q96Q15 3661 aaKnown RBP7.96□□□□□ -1.13
CDC42BPG-201ENST00000342711 TENM2Q9NT68 2774 aa7.96□□□□□ -1.14
CDC42BPG-201ENST00000342711 KRTAP3-1Q9BYR8 98 aa7.96□□□□□ -1.14
CDC42BPG-201ENST00000342711 CELSR1Q9NYQ6 3014 aa7.89□□□□□ -1.15
CDC42BPG-201ENST00000342711 KRTAP15-1Q3LI76 137 aa7.81□□□□□ -1.16
CDC42BPG-201ENST00000342711 OTOGQ6ZRI0 2925 aa7.8□□□□□ -1.16
CDC42BPG-201ENST00000342711 SVEP1Q4LDE5 3571 aa7.8□□□□□ -1.16
CDC42BPG-201ENST00000342711 ANK3Q12955 4377 aaKnown RBP7.79□□□□□ -1.16
CDC42BPG-201ENST00000342711 PKD1L1Q8TDX9 2849 aa7.76□□□□□ -1.17
CDC42BPG-201ENST00000342711 KRTAP10-6P60371 365 aaPredicted RBP7.75□□□□□ -1.17
CDC42BPG-201ENST00000342711 CSMD1Q96PZ7 3565 aa7.75□□□□□ -1.17
CDC42BPG-201ENST00000342711 CUBNO60494 3623 aa7.71□□□□□ -1.18
CDC42BPG-201ENST00000342711 SPENQ96T58 3664 aaKnown RBP7.71□□□□□ -1.18
CDC42BPG-201ENST00000342711 NBPF19A0A087WUL8 3843 aa7.69□□□□□ -1.18
CDC42BPG-201ENST00000342711 VWFP04275 2813 aa7.65□□□□□ -1.19
CDC42BPG-201ENST00000342711 CSMD2Q7Z408 3487 aa7.54□□□□□ -1.2
CDC42BPG-201ENST00000342711 FBN1P35555 2871 aaKnown RBP7.53□□□□□ -1.2
CDC42BPG-201ENST00000342711 BSNQ9UPA5 3926 aa7.51□□□□□ -1.21
CDC42BPG-201ENST00000342711 INE1O15225 51 aa7.45□□□□□ -1.22
CDC42BPG-201ENST00000342711 KRTAP3-2Q9BYR7 98 aa7.44□□□□□ -1.22
CDC42BPG-201ENST00000342711 KRTAP3-3Q9BYR6 98 aa7.42□□□□□ -1.22
CDC42BPG-201ENST00000342711 KRTAP10-12P60413 245 aa7.37□□□□□ -1.23
CDC42BPG-201ENST00000342711 CRCT1Q9UGL9 99 aa7.37□□□□□ -1.23
CDC42BPG-201ENST00000342711 SRRM2Q9UQ35 2752 aaKnown RBP7.36□□□□□ -1.23
CDC42BPG-201ENST00000342711 ZFHX3Q15911 3703 aa7.34□□□□□ -1.23
CDC42BPG-201ENST00000342711 MT1HL1P0DM35 61 aa7.34□□□□□ -1.23
CDC42BPG-201ENST00000342711 FBN3Q75N90 2809 aa7.32□□□□□ -1.24
CDC42BPG-201ENST00000342711 VPS13CQ709C8 3753 aa7.3□□□□□ -1.24
CDC42BPG-201ENST00000342711 HUWE1Q7Z6Z7 4374 aaKnown RBP7.29□□□□□ -1.24
CDC42BPG-201ENST00000342711 MEGF8Q7Z7M0 2845 aa7.26□□□□□ -1.25
CDC42BPG-201ENST00000342711 KRTAP10-4P60372 401 aaPredicted RBP7.24□□□□□ -1.25
CDC42BPG-201ENST00000342711 TRRAPQ9Y4A5 3859 aa7.24□□□□□ -1.25
CDC42BPG-201ENST00000342711 ALMS1Q8TCU4 4167 aa7.19□□□□□ -1.26
CDC42BPG-201ENST00000342711 KRTAP12-3P60328 96 aa7.19□□□□□ -1.26
CDC42BPG-201ENST00000342711 LCE3AQ5TA76 89 aa7.14□□□□□ -1.27
CDC42BPG-201ENST00000342711 COL7A1Q02388 2944 aa7.13□□□□□ -1.27
CDC42BPG-201ENST00000342711 KRTAP4-5Q9BYR2 181 aa7.07□□□□□ -1.28
CDC42BPG-201ENST00000342711 KRTAP23-1A1A580 65 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms