RNA–Protein interactions for RNA: ENST00000341037.8

TNC-201, Transcript of tenascin C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNC, Length 6,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-201ENST00000341037 LRBAP50851 2863 aa5.97□□□□□ -1.45
TNC-201ENST00000341037 NOTCH1P46531 2555 aa5.96□□□□□ -1.46
TNC-201ENST00000341037 REV3LO60673 3130 aa5.96□□□□□ -1.46
TNC-201ENST00000341037 LAMA1P25391 3075 aa5.94□□□□□ -1.46
TNC-201ENST00000341037 H0YAA0 97 aa5.93□□□□□ -1.46
TNC-201ENST00000341037 TPRXLQ17RH7 258 aa5.93□□□□□ -1.46
TNC-201ENST00000341037 PP632Q6XCG6 107 aa5.92□□□□□ -1.46
TNC-201ENST00000341037 CRYBG3Q68DQ2 2970 aa5.91□□□□□ -1.46
TNC-201ENST00000341037 STAB2Q8WWQ8 2551 aa5.9□□□□□ -1.46
TNC-201ENST00000341037 CFAP47Q6ZTR5 3102 aa5.89□□□□□ -1.47
TNC-201ENST00000341037 APCP25054 2843 aa5.88□□□□□ -1.47
TNC-201ENST00000341037 UBR5O95071 2799 aaPredicted RBP5.87□□□□□ -1.47
TNC-201ENST00000341037 MAP1AP78559 2803 aaPredicted RBP5.87□□□□□ -1.47
TNC-201ENST00000341037 NSD1Q96L73 2696 aaPredicted RBP5.86□□□□□ -1.47
TNC-201ENST00000341037 USP34Q70CQ2 3546 aa5.85□□□□□ -1.47
TNC-201ENST00000341037 KRTAP13-3Q3SY46 172 aa5.85□□□□□ -1.47
TNC-201ENST00000341037 PRO2289Q9P1D8 64 aa5.84□□□□□ -1.47
TNC-201ENST00000341037 UTP20O75691 2785 aaKnown RBP5.84□□□□□ -1.47
TNC-201ENST00000341037 ATMQ13315 3056 aa5.83□□□□□ -1.48
TNC-201ENST00000341037 BOD1L1Q8NFC6 3051 aa5.83□□□□□ -1.48
TNC-201ENST00000341037 ITPR1Q14643 2758 aa5.83□□□□□ -1.48
TNC-201ENST00000341037 P0C880 135 aa5.82□□□□□ -1.48
TNC-201ENST00000341037 SPEGQ15772 3267 aa5.81□□□□□ -1.48
TNC-201ENST00000341037 HIVEP1P15822 2718 aa5.79□□□□□ -1.48
TNC-201ENST00000341037 COL12A1Q99715 3063 aa5.78□□□□□ -1.48
TNC-201ENST00000341037 TACC2O95359 2948 aa5.78□□□□□ -1.48
TNC-201ENST00000341037 DMXL2Q8TDJ6 3036 aa5.77□□□□□ -1.49
TNC-201ENST00000341037 EYSQ5T1H1 3165 aa5.76□□□□□ -1.49
TNC-201ENST00000341037 ADGRG4Q8IZF6 3080 aa5.75□□□□□ -1.49
TNC-201ENST00000341037 FRYLO94915 3013 aa5.75□□□□□ -1.49
TNC-201ENST00000341037 ASH1LQ9NR48 2969 aaKnown RBP5.73□□□□□ -1.49
TNC-201ENST00000341037 ZZEF1O43149 2961 aa5.69□□□□□ -1.5
TNC-201ENST00000341037 TNRC18O15417 2968 aaPredicted RBP5.65□□□□□ -1.5
TNC-201ENST00000341037 KRTAP12-2P59991 146 aa5.65□□□□□ -1.5
TNC-201ENST00000341037 NBEAQ8NFP9 2946 aa5.64□□□□□ -1.51
TNC-201ENST00000341037 ASPMQ8IZT6 3477 aa5.6□□□□□ -1.51
TNC-201ENST00000341037 MYO15AQ9UKN7 3530 aa5.59□□□□□ -1.51
TNC-201ENST00000341037 FLNCQ14315 2725 aa5.58□□□□□ -1.52
TNC-201ENST00000341037 CELSR2Q9HCU4 2923 aa5.57□□□□□ -1.52
TNC-201ENST00000341037 TENM4Q6N022 2769 aa5.56□□□□□ -1.52
TNC-201ENST00000341037 DMXL1Q9Y485 3027 aa5.56□□□□□ -1.52
TNC-201ENST00000341037 HRNRQ86YZ3 2850 aaPredicted RBP5.54□□□□□ -1.52
TNC-201ENST00000341037 NBPF19A0A087WUL8 3843 aa5.53□□□□□ -1.52
TNC-201ENST00000341037 DCHS2Q6V1P9 2916 aa5.51□□□□□ -1.53
TNC-201ENST00000341037 KRTAP13-4Q3LI77 160 aa5.5□□□□□ -1.53
TNC-201ENST00000341037 WDFY3Q8IZQ1 3526 aa5.5□□□□□ -1.53
TNC-201ENST00000341037 LOC400499M0QZD8 3231 aa5.47□□□□□ -1.53
TNC-201ENST00000341037 KRTAP12-1P59990 96 aa5.47□□□□□ -1.53
TNC-201ENST00000341037 TENM2Q9NT68 2774 aa5.47□□□□□ -1.53
TNC-201ENST00000341037 DCHS1Q96JQ0 3298 aa5.46□□□□□ -1.54
TNC-201ENST00000341037 NIPBLQ6KC79 2804 aaeCLIP5.44□□□□□ -1.54
TNC-201ENST00000341037 CELSR1Q9NYQ6 3014 aa5.44□□□□□ -1.54
TNC-201ENST00000341037 KRTAP3-1Q9BYR8 98 aa5.41□□□□□ -1.54
TNC-201ENST00000341037 KRTAP15-1Q3LI76 137 aa5.4□□□□□ -1.54
TNC-201ENST00000341037 ZANQ9Y493 2812 aa5.39□□□□□ -1.55
TNC-201ENST00000341037 TENM1Q9UKZ4 2725 aa5.39□□□□□ -1.55
TNC-201ENST00000341037 RELNP78509 3460 aa5.39□□□□□ -1.55
TNC-201ENST00000341037 ZFHX4Q86UP3 3567 aa5.39□□□□□ -1.55
TNC-201ENST00000341037 FBN2P35556 2912 aa5.38□□□□□ -1.55
TNC-201ENST00000341037 TGP01266 2768 aa5.37□□□□□ -1.55
TNC-201ENST00000341037 CSMD1Q96PZ7 3565 aa5.36□□□□□ -1.55
TNC-201ENST00000341037 NF1P21359 2839 aa5.36□□□□□ -1.55
TNC-201ENST00000341037 ANK3Q12955 4377 aaKnown RBP5.34□□□□□ -1.55
TNC-201ENST00000341037 LAMA5O15230 3695 aa5.3□□□□□ -1.56
TNC-201ENST00000341037 CRCT1Q9UGL9 99 aa5.25□□□□□ -1.57
TNC-201ENST00000341037 KRTAP10-6P60371 365 aaPredicted RBP5.23□□□□□ -1.57
TNC-201ENST00000341037 TENM3Q9P273 2699 aa5.21□□□□□ -1.58
TNC-201ENST00000341037 SMG1Q96Q15 3661 aaKnown RBP5.19□□□□□ -1.58
TNC-201ENST00000341037 MXRA5Q9NR99 2828 aa5.19□□□□□ -1.58
TNC-201ENST00000341037 DMDP11532 3685 aa5.17□□□□□ -1.58
TNC-201ENST00000341037 MT1HL1P0DM35 61 aa5.15□□□□□ -1.58
TNC-201ENST00000341037 HUWE1Q7Z6Z7 4374 aaKnown RBP5.15□□□□□ -1.59
TNC-201ENST00000341037 PDZD2O15018 2839 aa5.14□□□□□ -1.59
TNC-201ENST00000341037 ALMS1Q8TCU4 4167 aa5.12□□□□□ -1.59
TNC-201ENST00000341037 KRTAP10-12P60413 245 aa5.12□□□□□ -1.59
TNC-201ENST00000341037 KRTAP4-5Q9BYR2 181 aa5.11□□□□□ -1.59
TNC-201ENST00000341037 PKD1L1Q8TDX9 2849 aa5.1□□□□□ -1.59
TNC-201ENST00000341037 VWFP04275 2813 aa5.1□□□□□ -1.59
TNC-201ENST00000341037 SPENQ96T58 3664 aaKnown RBP5.08□□□□□ -1.6
TNC-201ENST00000341037 ZFHX3Q15911 3703 aa5.07□□□□□ -1.6
TNC-201ENST00000341037 SVEP1Q4LDE5 3571 aa5.07□□□□□ -1.6
TNC-201ENST00000341037 KRTAP3-3Q9BYR6 98 aa5.05□□□□□ -1.6
TNC-201ENST00000341037 KRTAP3-2Q9BYR7 98 aa5.03□□□□□ -1.6
TNC-201ENST00000341037 TRRAPQ9Y4A5 3859 aa4.98□□□□□ -1.61
TNC-201ENST00000341037 BSNQ9UPA5 3926 aa4.98□□□□□ -1.61
TNC-201ENST00000341037 CSMD2Q7Z408 3487 aa4.98□□□□□ -1.61
TNC-201ENST00000341037 FBN1P35555 2871 aaKnown RBP4.95□□□□□ -1.62
TNC-201ENST00000341037 LCE3AQ5TA76 89 aa4.95□□□□□ -1.62
TNC-201ENST00000341037 KRTAP10-4P60372 401 aaPredicted RBP4.95□□□□□ -1.62
TNC-201ENST00000341037 CUBNO60494 3623 aa4.94□□□□□ -1.62
TNC-201ENST00000341037 KRTAP12-3P60328 96 aa4.94□□□□□ -1.62
TNC-201ENST00000341037 INE1O15225 51 aa4.93□□□□□ -1.62
TNC-201ENST00000341037 OTOGQ6ZRI0 2925 aa4.91□□□□□ -1.62
TNC-201ENST00000341037 VPS13CQ709C8 3753 aa4.9□□□□□ -1.63
TNC-201ENST00000341037 AKAP9Q99996 3911 aa4.89□□□□□ -1.63
TNC-201ENST00000341037 LORP23490 312 aaPredicted RBP4.87□□□□□ -1.63
TNC-201ENST00000341037 FBN3Q75N90 2809 aa4.86□□□□□ -1.63
TNC-201ENST00000341037 MEGF8Q7Z7M0 2845 aa4.86□□□□□ -1.63
TNC-201ENST00000341037 KRTAP8-1Q8IUC2 63 aa4.78□□□□□ -1.64
TNC-201ENST00000341037 MUC3AQ02505 3323 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms