RNA–Protein interactions for RNA: ENST00000340356.8

SOX18-201, Transcript of SRY-box 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX18, Length 1,864 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX18-201ENST00000340356 SMIM20Q8N5G0 67 aa12.36□□□□□ -0.43
SOX18-201ENST00000340356 Q5XG85 94 aa12.36□□□□□ -0.43
SOX18-201ENST00000340356 SPAG11AQ6PDA7 123 aa12.35□□□□□ -0.43
SOX18-201ENST00000340356 NDUFB1O75438 58 aa12.34□□□□□ -0.43
SOX18-201ENST00000340356 ASB16-AS1Q495Z4 193 aa12.34□□□□□ -0.43
SOX18-201ENST00000340356 LIMD2Q9BT23 127 aa12.34□□□□□ -0.43
SOX18-201ENST00000340356 WFDC13Q8IUB5 93 aa12.33□□□□□ -0.44
SOX18-201ENST00000340356 TRAV7A0A075B6U4 112 aa12.32□□□□□ -0.44
SOX18-201ENST00000340356 C1orf195Q5TG92 126 aa12.31□□□□□ -0.44
SOX18-201ENST00000340356 MT1HL1P0DM35 61 aa12.31□□□□□ -0.44
SOX18-201ENST00000340356 ABCA13Q86UQ4 5058 aa12.3□□□□□ -0.44
SOX18-201ENST00000340356 RPS29P62273 56 aaKnown RBP12.28□□□□□ -0.44
SOX18-201ENST00000340356 OCR1Q9BZK8 76 aa12.27□□□□□ -0.45
SOX18-201ENST00000340356 A0A1B0GVX0 72 aa12.26□□□□□ -0.45
SOX18-201ENST00000340356 CASC2Q6XLA1 102 aa12.26□□□□□ -0.45
SOX18-201ENST00000340356 IGHV6-1A0A0B4J1U7 121 aa12.25□□□□□ -0.45
SOX18-201ENST00000340356 MMP24-AS1A0A0U1RRL7 71 aa12.25□□□□□ -0.45
SOX18-201ENST00000340356 KRTAP29-1A8MX34 341 aaPredicted RBP12.25□□□□□ -0.45
SOX18-201ENST00000340356 C8orf17Q9NRJ1 99 aa12.21□□□□□ -0.45
SOX18-201ENST00000340356 OXTP01178 125 aa12.21□□□□□ -0.46
SOX18-201ENST00000340356 RETNLBQ9BQ08 111 aa12.19□□□□□ -0.46
SOX18-201ENST00000340356 hDV103S1A0JD37 113 aa12.19□□□□□ -0.46
SOX18-201ENST00000340356 C20orf197Q8N268 126 aa12.18□□□□□ -0.46
SOX18-201ENST00000340356 NOTCH2NLQ7Z3S9 236 aa12.16□□□□□ -0.46
SOX18-201ENST00000340356 CYSTM1Q9H1C7 97 aa12.14□□□□□ -0.47
SOX18-201ENST00000340356 DMBT1Q9UGM3 2413 aaPredicted RBP12.14□□□□□ -0.47
SOX18-201ENST00000340356 TMEM254Q8TBM7 123 aa12.09□□□□□ -0.47
SOX18-201ENST00000340356 SNURFQ9Y675 71 aa12.09□□□□□ -0.47
SOX18-201ENST00000340356 C8orf87E5RJ46 101 aa12.06□□□□□ -0.48
SOX18-201ENST00000340356 KLKP1Q107X0 134 aa12.06□□□□□ -0.48
SOX18-201ENST00000340356 MRPL34Q9BQ48 92 aaKnown RBP12.06□□□□□ -0.48
SOX18-201ENST00000340356 LINC00313P59037 77 aa12.02□□□□□ -0.48
SOX18-201ENST00000340356 A0A0U1RQV1 116 aa12.02□□□□□ -0.49
SOX18-201ENST00000340356 NDUFS5O43920 106 aa12.02□□□□□ -0.49
SOX18-201ENST00000340356 C5orf47Q569G3 176 aa12.02□□□□□ -0.49
SOX18-201ENST00000340356 TMEM258P61165 79 aa12□□□□□ -0.49
SOX18-201ENST00000340356 J3QL48 77 aa11.98□□□□□ -0.49
SOX18-201ENST00000340356 TP53AIP1Q9HCN2 124 aa11.96□□□□□ -0.49
SOX18-201ENST00000340356 NDUFC1O43677 76 aa11.95□□□□□ -0.5
SOX18-201ENST00000340356 C9orf92A6NGG3 77 aa11.95□□□□□ -0.5
SOX18-201ENST00000340356 H0Y9P7 68 aa11.95□□□□□ -0.5
SOX18-201ENST00000340356 MP68P56378 58 aa11.95□□□□□ -0.5
SOX18-201ENST00000340356 KRTAP16-1A8MUX0 517 aa11.93□□□□□ -0.5
SOX18-201ENST00000340356 H7BZZ5 65 aa11.93□□□□□ -0.5
SOX18-201ENST00000340356 PCLOQ9Y6V0 5065 aa11.93□□□□□ -0.5
SOX18-201ENST00000340356 TRAV22A0A0B4J277 110 aa11.92□□□□□ -0.5
SOX18-201ENST00000340356 ZCCHC13Q8WW36 166 aaKnown RBP11.9□□□□□ -0.5
SOX18-201ENST00000340356 FP248Q71RG6 208 aaPredicted RBP11.89□□□□□ -0.51
SOX18-201ENST00000340356 LINC00208Q96KT6 92 aa11.89□□□□□ -0.51
SOX18-201ENST00000340356 IGLV7-46A0A075B6I9 117 aa11.87□□□□□ -0.51
SOX18-201ENST00000340356 PRR4Q16378 134 aa11.86□□□□□ -0.51
SOX18-201ENST00000340356 Q8N9P0 234 aaPredicted RBP11.86□□□□□ -0.51
SOX18-201ENST00000340356 H3BPC8 53 aa11.84□□□□□ -0.51
SOX18-201ENST00000340356 C1orf64Q8NEQ6 169 aa11.83□□□□□ -0.52
SOX18-201ENST00000340356 FAM236DA0A1B0GTK5 79 aa11.81□□□□□ -0.52
SOX18-201ENST00000340356 FAM236CP0DP71 79 aa11.81□□□□□ -0.52
SOX18-201ENST00000340356 Q5W150 140 aa11.8□□□□□ -0.52
SOX18-201ENST00000340356 KRTAP13-3Q3SY46 172 aa11.78□□□□□ -0.52
SOX18-201ENST00000340356 ATP5EP56381 51 aaPredicted RBP11.76□□□□□ -0.53
SOX18-201ENST00000340356 C20orf166-AS1Q96NR2 134 aa11.71□□□□□ -0.53
SOX18-201ENST00000340356 RPS28P62857 69 aaKnown RBP11.7□□□□□ -0.54
SOX18-201ENST00000340356 A8MUU9 505 aa11.7□□□□□ -0.54
SOX18-201ENST00000340356 LPAP08519 4548 aa11.68□□□□□ -0.54
SOX18-201ENST00000340356 XP32Q5T750 250 aa11.67□□□□□ -0.54
SOX18-201ENST00000340356 LOC101927531A0A1B0GV80 90 aa11.66□□□□□ -0.54
SOX18-201ENST00000340356 PCOTHQ58A44 107 aa11.66□□□□□ -0.54
SOX18-201ENST00000340356 TPRXLQ17RH7 258 aa11.65□□□□□ -0.54
SOX18-201ENST00000340356 Q75L30 129 aa11.61□□□□□ -0.55
SOX18-201ENST00000340356 SERP1Q9Y6X1 66 aa11.61□□□□□ -0.55
SOX18-201ENST00000340356 HERC1Q15751 4861 aa11.61□□□□□ -0.55
SOX18-201ENST00000340356 CYP4F30PQ9H0H9 118 aa11.59□□□□□ -0.55
SOX18-201ENST00000340356 IGKV2-30P06310 120 aa11.56□□□□□ -0.56
SOX18-201ENST00000340356 RPL37P61927 97 aaKnown RBP11.55□□□□□ -0.56
SOX18-201ENST00000340356 SPANXA2-OT1Q8N9U9 137 aa11.55□□□□□ -0.56
SOX18-201ENST00000340356 LRP2P98164 4655 aa11.52□□□□□ -0.56
SOX18-201ENST00000340356 IGKV2D-30A0A075B6S6 120 aa11.51□□□□□ -0.57
SOX18-201ENST00000340356 ATP11AUNQ6ZP68 121 aa11.46□□□□□ -0.57
SOX18-201ENST00000340356 HMCN2Q8NDA2 5059 aa11.43□□□□□ -0.58
SOX18-201ENST00000340356 HRES1P13985 223 aa11.42□□□□□ -0.58
SOX18-201ENST00000340356 C7orf65Q6ZTY9 151 aa11.41□□□□□ -0.58
SOX18-201ENST00000340356 SMIM26A0A096LP01 95 aa11.34□□□□□ -0.59
SOX18-201ENST00000340356 SPINK7P58062 85 aa11.32□□□□□ -0.6
SOX18-201ENST00000340356 COA5Q86WW8 74 aa11.27□□□□□ -0.61
SOX18-201ENST00000340356 DMAC1Q96GE9 116 aa11.25□□□□□ -0.61
SOX18-201ENST00000340356 SEC61BP60468 96 aaKnown RBP11.23□□□□□ -0.61
SOX18-201ENST00000340356 SVIPQ8NHG7 77 aa11.22□□□□□ -0.61
SOX18-201ENST00000340356 MUC17Q685J3 4493 aa11.2□□□□□ -0.62
SOX18-201ENST00000340356 C4orf26Q17RF5 130 aa11.2□□□□□ -0.62
SOX18-201ENST00000340356 ACYP2P14621 99 aa11.19□□□□□ -0.62
SOX18-201ENST00000340356 KRTAP4-1Q9BYQ7 146 aa11.15□□□□□ -0.63
SOX18-201ENST00000340356 MPLKIPQ8TAP9 179 aa11.11□□□□□ -0.63
SOX18-201ENST00000340356 CHKB-CPT1BH3BT56 60 aa11.06□□□□□ -0.64
SOX18-201ENST00000340356 Q1T7F1 81 aa11.06□□□□□ -0.64
SOX18-201ENST00000340356 A8MUN3 132 aa11.06□□□□□ -0.64
SOX18-201ENST00000340356 KRTAP3-1Q9BYR8 98 aa11.03□□□□□ -0.64
SOX18-201ENST00000340356 V9GYY9 64 aa11.03□□□□□ -0.64
SOX18-201ENST00000340356 COX6B2Q6YFQ2 88 aa11□□□□□ -0.65
SOX18-201ENST00000340356 MUC2Q02817 5179 aa11□□□□□ -0.65
SOX18-201ENST00000340356 UBR4Q5T4S7 5183 aa10.99□□□□□ -0.65
SOX18-201ENST00000340356 RBM12B-AS1Q9P1G2 102 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms