RNA–Protein interactions for RNA: ENST00000338176.8

RAB28-203, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAB28, Length 1,787 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-203ENST00000338176 C14orf132Q9NPU4 83 aa10.69□□□□□ -0.7
RAB28-203ENST00000338176 JMJD7-PLA2G4BH0Y9G9 81 aa10.68□□□□□ -0.7
RAB28-203ENST00000338176 LOC110117498A0A087WWA1 95 aa10.67□□□□□ -0.7
RAB28-203ENST00000338176 C8orf87E5RJ46 101 aa10.65□□□□□ -0.71
RAB28-203ENST00000338176 LYRM7Q5U5X0 104 aa10.65□□□□□ -0.71
RAB28-203ENST00000338176 TRBV20-1A0A075B6N2 111 aa10.64□□□□□ -0.71
RAB28-203ENST00000338176 FSIP2Q5CZC0 6907 aa10.64□□□□□ -0.71
RAB28-203ENST00000338176 TAX1BP3O14907 124 aa10.63□□□□□ -0.71
RAB28-203ENST00000338176 C9orf118A6NHY6 69 aa10.62□□□□□ -0.71
RAB28-203ENST00000338176 J3KT08 172 aa10.62□□□□□ -0.71
RAB28-203ENST00000338176 MTURNQ8N3F0 131 aa10.62□□□□□ -0.71
RAB28-203ENST00000338176 C21orf62-AS1Q17RA5 79 aa10.62□□□□□ -0.71
RAB28-203ENST00000338176 PDE6GP18545 87 aa10.58□□□□□ -0.72
RAB28-203ENST00000338176 A0A1W2PPM0 123 aa10.57□□□□□ -0.72
RAB28-203ENST00000338176 HRES1P13985 223 aa10.57□□□□□ -0.72
RAB28-203ENST00000338176 IGKV3D-7A0A0C4DH55 119 aa10.56□□□□□ -0.72
RAB28-203ENST00000338176 A8MWP4 228 aa10.55□□□□□ -0.72
RAB28-203ENST00000338176 NDUFB1O75438 58 aa10.55□□□□□ -0.72
RAB28-203ENST00000338176 A0A1B0GW54 56 aa10.54□□□□□ -0.72
RAB28-203ENST00000338176 C8orf17Q9NRJ1 99 aa10.54□□□□□ -0.72
RAB28-203ENST00000338176 MPLKIPQ8TAP9 179 aa10.52□□□□□ -0.72
RAB28-203ENST00000338176 ZCCHC13Q8WW36 166 aaKnown RBP10.52□□□□□ -0.72
RAB28-203ENST00000338176 FAM236DA0A1B0GTK5 79 aa10.51□□□□□ -0.73
RAB28-203ENST00000338176 H3BT86 120 aa10.51□□□□□ -0.73
RAB28-203ENST00000338176 FAM236CP0DP71 79 aa10.51□□□□□ -0.73
RAB28-203ENST00000338176 CRCT1Q9UGL9 99 aa10.51□□□□□ -0.73
RAB28-203ENST00000338176 NREPQ16612 68 aa10.5□□□□□ -0.73
RAB28-203ENST00000338176 Q8N9P0 234 aaPredicted RBP10.5□□□□□ -0.73
RAB28-203ENST00000338176 PRR15Q8IV56 129 aa10.46□□□□□ -0.74
RAB28-203ENST00000338176 RBM12B-AS1Q9P1G2 102 aa10.46□□□□□ -0.74
RAB28-203ENST00000338176 KRTAP9-8Q9BYQ0 159 aa10.44□□□□□ -0.74
RAB28-203ENST00000338176 Q6ZVQ6 151 aa10.44□□□□□ -0.74
RAB28-203ENST00000338176 SPINK7P58062 85 aa10.43□□□□□ -0.74
RAB28-203ENST00000338176 SPCS1Q9Y6A9 102 aa10.43□□□□□ -0.74
RAB28-203ENST00000338176 MMP24-AS1A0A0U1RRL7 71 aa10.41□□□□□ -0.74
RAB28-203ENST00000338176 SMCPP49901 116 aaPredicted RBP10.4□□□□□ -0.74
RAB28-203ENST00000338176 K7EQZ3 153 aa10.39□□□□□ -0.75
RAB28-203ENST00000338176 TMEM254Q8TBM7 123 aa10.34□□□□□ -0.75
RAB28-203ENST00000338176 MRPL34Q9BQ48 92 aaKnown RBP10.34□□□□□ -0.75
RAB28-203ENST00000338176 COL5A1-AS1Q5SY13 56 aa10.33□□□□□ -0.76
RAB28-203ENST00000338176 BPY2O14599 106 aa10.31□□□□□ -0.76
RAB28-203ENST00000338176 hDV103S1A0JD37 113 aa10.31□□□□□ -0.76
RAB28-203ENST00000338176 MT2AP02795 61 aa10.3□□□□□ -0.76
RAB28-203ENST00000338176 Q8N9L7 120 aa10.3□□□□□ -0.76
RAB28-203ENST00000338176 PRO0461Q9UI25 63 aa10.3□□□□□ -0.76
RAB28-203ENST00000338176 WFDC13Q8IUB5 93 aa10.29□□□□□ -0.76
RAB28-203ENST00000338176 NDUFS5O43920 106 aa10.27□□□□□ -0.77
RAB28-203ENST00000338176 K7EP34 96 aa10.26□□□□□ -0.77
RAB28-203ENST00000338176 MT1FP04733 61 aa10.24□□□□□ -0.77
RAB28-203ENST00000338176 USH2AO75445 5202 aa10.24□□□□□ -0.77
RAB28-203ENST00000338176 LINC00846Q9NV44 126 aa10.21□□□□□ -0.77
RAB28-203ENST00000338176 Q5W150 140 aa10.2□□□□□ -0.78
RAB28-203ENST00000338176 PCP4L1A6NKN8 68 aa10.19□□□□□ -0.78
RAB28-203ENST00000338176 CASC2Q6XLA1 102 aa10.17□□□□□ -0.78
RAB28-203ENST00000338176 KRTAP10-10P60014 251 aa10.16□□□□□ -0.78
RAB28-203ENST00000338176 IGKV2D-30A0A075B6S6 120 aa10.14□□□□□ -0.79
RAB28-203ENST00000338176 HCG22E2RYF7 251 aa10.14□□□□□ -0.79
RAB28-203ENST00000338176 IGKV2-30P06310 120 aa10.14□□□□□ -0.79
RAB28-203ENST00000338176 SSPOA2VEC9 5147 aa10.13□□□□□ -0.79
RAB28-203ENST00000338176 UBL5Q9BZL1 73 aa10.11□□□□□ -0.79
RAB28-203ENST00000338176 KRTAP9-3Q9BYQ3 159 aa10.11□□□□□ -0.79
RAB28-203ENST00000338176 LCE2BO14633 110 aa10.09□□□□□ -0.79
RAB28-203ENST00000338176 GTF2H5Q6ZYL4 71 aa10.08□□□□□ -0.8
RAB28-203ENST00000338176 C7orf65Q6ZTY9 151 aa10.06□□□□□ -0.8
RAB28-203ENST00000338176 ETDBQ3ZM63 59 aa10.05□□□□□ -0.8
RAB28-203ENST00000338176 H1FX-AS1Q4G0G2 97 aa10.03□□□□□ -0.8
RAB28-203ENST00000338176 F8W1H4 67 aa10.02□□□□□ -0.81
RAB28-203ENST00000338176 CXCL6P80162 114 aa10.01□□□□□ -0.81
RAB28-203ENST00000338176 C4orf26Q17RF5 130 aa9.97□□□□□ -0.81
RAB28-203ENST00000338176 KRTAP19-1Q8IUB9 90 aa9.88□□□□□ -0.83
RAB28-203ENST00000338176 FCGBPQ9Y6R7 5405 aaPredicted RBP9.88□□□□□ -0.83
RAB28-203ENST00000338176 KRTAP3-1Q9BYR8 98 aa9.85□□□□□ -0.83
RAB28-203ENST00000338176 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.8□□□□□ -0.84
RAB28-203ENST00000338176 TP53AIP1Q9HCN2 124 aa9.8□□□□□ -0.84
RAB28-203ENST00000338176 C5orf47Q569G3 176 aa9.76□□□□□ -0.85
RAB28-203ENST00000338176 C1orf64Q8NEQ6 169 aa9.76□□□□□ -0.85
RAB28-203ENST00000338176 ACYP1P07311 99 aa9.72□□□□□ -0.85
RAB28-203ENST00000338176 S4R3F8 94 aa9.7□□□□□ -0.86
RAB28-203ENST00000338176 FAM240AA0A1B0GVK7 77 aa9.68□□□□□ -0.86
RAB28-203ENST00000338176 LCA10Q71F78 164 aa9.68□□□□□ -0.86
RAB28-203ENST00000338176 CYP4F30PQ9H0H9 118 aa9.67□□□□□ -0.86
RAB28-203ENST00000338176 HIST1H4AP62805 103 aaKnown RBP9.66□□□□□ -0.86
RAB28-203ENST00000338176 KRTAP19-6Q3LI70 58 aa9.66□□□□□ -0.86
RAB28-203ENST00000338176 KRTAP9-7A8MTY7 169 aa9.65□□□□□ -0.86
RAB28-203ENST00000338176 TRAV22A0A0B4J277 110 aa9.63□□□□□ -0.87
RAB28-203ENST00000338176 ATP5EP2Q5VTU8 51 aa9.63□□□□□ -0.87
RAB28-203ENST00000338176 A0A1B0GV90 55 aa9.62□□□□□ -0.87
RAB28-203ENST00000338176 A0A087WVE0 104 aa9.6□□□□□ -0.87
RAB28-203ENST00000338176 CSAG1Q6PB30 78 aa9.6□□□□□ -0.87
RAB28-203ENST00000338176 FAM236AA0A1B0GUQ0 79 aa9.58□□□□□ -0.88
RAB28-203ENST00000338176 FAM236BA0A1B0GV22 79 aa9.58□□□□□ -0.88
RAB28-203ENST00000338176 KRTAP3-3Q9BYR6 98 aa9.57□□□□□ -0.88
RAB28-203ENST00000338176 LOC101927531A0A1B0GV80 90 aa9.56□□□□□ -0.88
RAB28-203ENST00000338176 MACF1Q9UPN3 7388 aaKnown RBP9.53□□□□□ -0.88
RAB28-203ENST00000338176 H0Y9P7 68 aa9.52□□□□□ -0.88
RAB28-203ENST00000338176 UQCRQO14949 82 aa9.52□□□□□ -0.88
RAB28-203ENST00000338176 LINC00643Q86TS7 51 aa9.52□□□□□ -0.88
RAB28-203ENST00000338176 SYNE2Q8WXH0 6885 aaKnown RBP9.44□□□□□ -0.9
RAB28-203ENST00000338176 ATOX1O00244 68 aa9.43□□□□□ -0.9
RAB28-203ENST00000338176 MT1BP07438 61 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms