RNA–Protein interactions for RNA: ENST00000336665.9

AGAP1-202, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene AGAP1, Length 5,427 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP1-202ENST00000336665 TACC2O95359 2948 aa13.4□□□□□ -0.26
AGAP1-202ENST00000336665 REV3LO60673 3130 aa13.39□□□□□ -0.27
AGAP1-202ENST00000336665 KRTAP13-3Q3SY46 172 aa13.38□□□□□ -0.27
AGAP1-202ENST00000336665 NIPBLQ6KC79 2804 aaeCLIP13.38□□□□□ -0.272e-6■■■■□ 19.4
AGAP1-202ENST00000336665 MKI67P46013 3256 aaKnown RBP13.35□□□□□ -0.27
AGAP1-202ENST00000336665 CRYBG3Q68DQ2 2970 aa13.22□□□□□ -0.29
AGAP1-202ENST00000336665 H0YAA0 97 aa13.19□□□□□ -0.3
AGAP1-202ENST00000336665 UNC80Q8N2C7 3258 aa13.19□□□□□ -0.3
AGAP1-202ENST00000336665 P0C880 135 aa13.17□□□□□ -0.3
AGAP1-202ENST00000336665 TRIOO75962 3097 aa13.17□□□□□ -0.3
AGAP1-202ENST00000336665 LRBAP50851 2863 aa13.13□□□□□ -0.31
AGAP1-202ENST00000336665 XIRP2A4UGR9 3374 aa13.12□□□□□ -0.31
AGAP1-202ENST00000336665 ATMQ13315 3056 aa13.09□□□□□ -0.31
AGAP1-202ENST00000336665 COL12A1Q99715 3063 aa13.07□□□□□ -0.32
AGAP1-202ENST00000336665 DMXL2Q8TDJ6 3036 aa13.07□□□□□ -0.32
AGAP1-202ENST00000336665 TENM3Q9P273 2699 aa13.06□□□□□ -0.32
AGAP1-202ENST00000336665 KALRNO60229 2985 aa13.01□□□□□ -0.33
AGAP1-202ENST00000336665 ASH1LQ9NR48 2969 aaKnown RBP13□□□□□ -0.33
AGAP1-202ENST00000336665 LAMA1P25391 3075 aa13□□□□□ -0.33
AGAP1-202ENST00000336665 VPS13AQ96RL7 3174 aa12.97□□□□□ -0.33
AGAP1-202ENST00000336665 CELSR2Q9HCU4 2923 aa12.97□□□□□ -0.33
AGAP1-202ENST00000336665 TENM1Q9UKZ4 2725 aa12.95□□□□□ -0.34
AGAP1-202ENST00000336665 DNAH14Q0VDD8 3507 aa12.91□□□□□ -0.34
AGAP1-202ENST00000336665 CDH23Q9H251 3354 aa12.9□□□□□ -0.34
AGAP1-202ENST00000336665 DCHS2Q6V1P9 2916 aa12.85□□□□□ -0.35
AGAP1-202ENST00000336665 FRYLO94915 3013 aa12.84□□□□□ -0.35
AGAP1-202ENST00000336665 TENM2Q9NT68 2774 aa12.83□□□□□ -0.36
AGAP1-202ENST00000336665 VCANP13611 3396 aa12.79□□□□□ -0.36
AGAP1-202ENST00000336665 FREM2Q5SZK8 3169 aa12.7□□□□□ -0.38
AGAP1-202ENST00000336665 SPEGQ15772 3267 aa12.69□□□□□ -0.38
AGAP1-202ENST00000336665 ZZEF1O43149 2961 aa12.69□□□□□ -0.38
AGAP1-202ENST00000336665 NF1P21359 2839 aa12.63□□□□□ -0.39
AGAP1-202ENST00000336665 EYSQ5T1H1 3165 aa12.62□□□□□ -0.39
AGAP1-202ENST00000336665 ADGRG4Q8IZF6 3080 aa12.59□□□□□ -0.39
AGAP1-202ENST00000336665 NBEAQ8NFP9 2946 aa12.56□□□□□ -0.4
AGAP1-202ENST00000336665 SZT2Q5T011 3432 aa12.55□□□□□ -0.4
AGAP1-202ENST00000336665 USP34Q70CQ2 3546 aa12.55□□□□□ -0.4
AGAP1-202ENST00000336665 KRTAP13-4Q3LI77 160 aa12.53□□□□□ -0.4
AGAP1-202ENST00000336665 ZANQ9Y493 2812 aa12.48□□□□□ -0.41
AGAP1-202ENST00000336665 KRTAP12-2P59991 146 aa12.48□□□□□ -0.41
AGAP1-202ENST00000336665 BOD1L1Q8NFC6 3051 aa12.47□□□□□ -0.41
AGAP1-202ENST00000336665 TGP01266 2768 aa12.45□□□□□ -0.42
AGAP1-202ENST00000336665 CELSR3Q9NYQ7 3312 aa12.43□□□□□ -0.42
AGAP1-202ENST00000336665 MYO15AQ9UKN7 3530 aa12.36□□□□□ -0.43
AGAP1-202ENST00000336665 KRTAP12-1P59990 96 aa12.29□□□□□ -0.44
AGAP1-202ENST00000336665 PKD1L1Q8TDX9 2849 aa12.24□□□□□ -0.45
AGAP1-202ENST00000336665 TNRC18O15417 2968 aaPredicted RBP12.22□□□□□ -0.45
AGAP1-202ENST00000336665 CFAP47Q6ZTR5 3102 aa12.2□□□□□ -0.46
AGAP1-202ENST00000336665 PDZD2O15018 2839 aa12.2□□□□□ -0.46
AGAP1-202ENST00000336665 KRTAP15-1Q3LI76 137 aa12.19□□□□□ -0.46
AGAP1-202ENST00000336665 MXRA5Q9NR99 2828 aa12.18□□□□□ -0.46
AGAP1-202ENST00000336665 HRNRQ86YZ3 2850 aaPredicted RBP12.14□□□□□ -0.47
AGAP1-202ENST00000336665 COL6A3P12111 3177 aa12.14□□□□□ -0.47
AGAP1-202ENST00000336665 FBN2P35556 2912 aa12.11□□□□□ -0.47
AGAP1-202ENST00000336665 CELSR1Q9NYQ6 3014 aa12.11□□□□□ -0.47
AGAP1-202ENST00000336665 SPTBN5Q9NRC6 3674 aaKnown RBP12.09□□□□□ -0.47
AGAP1-202ENST00000336665 KRTAP3-1Q9BYR8 98 aa12.08□□□□□ -0.48
AGAP1-202ENST00000336665 VWFP04275 2813 aa12.02□□□□□ -0.49
AGAP1-202ENST00000336665 WDFY3Q8IZQ1 3526 aa11.82□□□□□ -0.52
AGAP1-202ENST00000336665 MT1HL1P0DM35 61 aa11.8□□□□□ -0.52
AGAP1-202ENST00000336665 KRTAP10-6P60371 365 aaPredicted RBP11.78□□□□□ -0.52
AGAP1-202ENST00000336665 DMXL1Q9Y485 3027 aa11.77□□□□□ -0.53
AGAP1-202ENST00000336665 LOC400499M0QZD8 3231 aa11.74□□□□□ -0.53
AGAP1-202ENST00000336665 FBN3Q75N90 2809 aa11.65□□□□□ -0.55
AGAP1-202ENST00000336665 KRTAP10-12P60413 245 aa11.64□□□□□ -0.55
AGAP1-202ENST00000336665 DCHS1Q96JQ0 3298 aa11.58□□□□□ -0.56
AGAP1-202ENST00000336665 SRRM2Q9UQ35 2752 aaKnown RBP11.57□□□□□ -0.56
AGAP1-202ENST00000336665 CRCT1Q9UGL9 99 aa11.5□□□□□ -0.57
AGAP1-202ENST00000336665 MUC3AQ02505 3323 aa11.5□□□□□ -0.57
AGAP1-202ENST00000336665 ASPMQ8IZT6 3477 aa11.49□□□□□ -0.57
AGAP1-202ENST00000336665 DMDP11532 3685 aa11.41□□□□□ -0.58
AGAP1-202ENST00000336665 ZFHX4Q86UP3 3567 aa11.37□□□□□ -0.59
AGAP1-202ENST00000336665 KRTAP4-5Q9BYR2 181 aa11.34□□□□□ -0.59
AGAP1-202ENST00000336665 INE1O15225 51 aa11.33□□□□□ -0.6
AGAP1-202ENST00000336665 KRTAP3-2Q9BYR7 98 aa11.3□□□□□ -0.6
AGAP1-202ENST00000336665 KRTAP3-3Q9BYR6 98 aa11.28□□□□□ -0.6
AGAP1-202ENST00000336665 KRTAP10-4P60372 401 aaPredicted RBP11.26□□□□□ -0.61
AGAP1-202ENST00000336665 KRTAP12-3P60328 96 aa11.25□□□□□ -0.61
AGAP1-202ENST00000336665 OTOGQ6ZRI0 2925 aa11.23□□□□□ -0.61
AGAP1-202ENST00000336665 FBN1P35555 2871 aaKnown RBP11.21□□□□□ -0.62
AGAP1-202ENST00000336665 LAMA5O15230 3695 aa11.18□□□□□ -0.62
AGAP1-202ENST00000336665 MEGF8Q7Z7M0 2845 aa11.17□□□□□ -0.62
AGAP1-202ENST00000336665 SMG1Q96Q15 3661 aaKnown RBP11.14□□□□□ -0.63
AGAP1-202ENST00000336665 KRTAP23-1A1A580 65 aa11.1□□□□□ -0.63
AGAP1-202ENST00000336665 CSMD1Q96PZ7 3565 aa11.04□□□□□ -0.64
AGAP1-202ENST00000336665 COL7A1Q02388 2944 aa11.03□□□□□ -0.64
AGAP1-202ENST00000336665 RELNP78509 3460 aa11.01□□□□□ -0.65
AGAP1-202ENST00000336665 LCE3AQ5TA76 89 aa10.97□□□□□ -0.65
AGAP1-202ENST00000336665 KRTAP8-1Q8IUC2 63 aa10.94□□□□□ -0.66
AGAP1-202ENST00000336665 NBPF19A0A087WUL8 3843 aa10.93□□□□□ -0.66
AGAP1-202ENST00000336665 SPENQ96T58 3664 aaKnown RBP10.87□□□□□ -0.67
AGAP1-202ENST00000336665 SVEP1Q4LDE5 3571 aa10.85□□□□□ -0.67
AGAP1-202ENST00000336665 ANK3Q12955 4377 aaKnown RBP10.84□□□□□ -0.67
AGAP1-202ENST00000336665 ZFHX3Q15911 3703 aa10.76□□□□□ -0.69
AGAP1-202ENST00000336665 LORP23490 312 aaPredicted RBP10.67□□□□□ -0.7
AGAP1-202ENST00000336665 CUBNO60494 3623 aa10.64□□□□□ -0.71
AGAP1-202ENST00000336665 KRTAP10-5P60370 271 aa10.62□□□□□ -0.71
AGAP1-202ENST00000336665 ALMS1Q8TCU4 4167 aa10.59□□□□□ -0.71
AGAP1-202ENST00000336665 HUWE1Q7Z6Z7 4374 aaKnown RBP10.52□□□□□ -0.73
AGAP1-202ENST00000336665 MT1HP80294 61 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms