RNA–Protein interactions for RNA: ENST00000335762.9

CACNA1C-202, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 6,968 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-202ENST00000335762 KRTAP10-8P60410 259 aa5.73□□□□□ -1.49
CACNA1C-202ENST00000335762 KRTAP13-1Q8IUC0 172 aa5.72□□□□□ -1.49
CACNA1C-202ENST00000335762 ASPMQ8IZT6 3477 aa5.69□□□□□ -1.5
CACNA1C-202ENST00000335762 A0A1B0GVY2 172 aa5.68□□□□□ -1.5
CACNA1C-202ENST00000335762 CFAP47Q6ZTR5 3102 aa5.68□□□□□ -1.5
CACNA1C-202ENST00000335762 ASH1LQ9NR48 2969 aaKnown RBP5.67□□□□□ -1.5
CACNA1C-202ENST00000335762 VPS13AQ96RL7 3174 aa5.66□□□□□ -1.5
CACNA1C-202ENST00000335762 UTP20O75691 2785 aaKnown RBP5.64□□□□□ -1.51
CACNA1C-202ENST00000335762 CHD9Q3L8U1 2897 aa5.64□□□□□ -1.51
CACNA1C-202ENST00000335762 WDFY3Q8IZQ1 3526 aa5.64□□□□□ -1.51
CACNA1C-202ENST00000335762 FLNCQ14315 2725 aa5.63□□□□□ -1.51
CACNA1C-202ENST00000335762 HTTP42858 3142 aa5.63□□□□□ -1.51
CACNA1C-202ENST00000335762 DSPP15924 2871 aaKnown RBP5.63□□□□□ -1.51
CACNA1C-202ENST00000335762 TACC2O95359 2948 aa5.62□□□□□ -1.51
CACNA1C-202ENST00000335762 CHD7Q9P2D1 2997 aa5.61□□□□□ -1.51
CACNA1C-202ENST00000335762 H0YAA0 97 aa5.61□□□□□ -1.51
CACNA1C-202ENST00000335762 DMDP11532 3685 aa5.58□□□□□ -1.52
CACNA1C-202ENST00000335762 ITPR2Q14571 2701 aa5.56□□□□□ -1.52
CACNA1C-202ENST00000335762 LAMA1P25391 3075 aa5.55□□□□□ -1.52
CACNA1C-202ENST00000335762 ZFHX4Q86UP3 3567 aa5.52□□□□□ -1.53
CACNA1C-202ENST00000335762 NBPF19A0A087WUL8 3843 aa5.51□□□□□ -1.53
CACNA1C-202ENST00000335762 XP32Q5T750 250 aa5.51□□□□□ -1.53
CACNA1C-202ENST00000335762 KALRNO60229 2985 aa5.5□□□□□ -1.53
CACNA1C-202ENST00000335762 PRO2289Q9P1D8 64 aa5.49□□□□□ -1.53
CACNA1C-202ENST00000335762 BOD1L1Q8NFC6 3051 aa5.49□□□□□ -1.53
CACNA1C-202ENST00000335762 HIVEP1P15822 2718 aa5.48□□□□□ -1.53
CACNA1C-202ENST00000335762 KRTAP10-10P60014 251 aa5.47□□□□□ -1.53
CACNA1C-202ENST00000335762 APCP25054 2843 aa5.47□□□□□ -1.53
CACNA1C-202ENST00000335762 COL12A1Q99715 3063 aa5.46□□□□□ -1.54
CACNA1C-202ENST00000335762 ITPR1Q14643 2758 aa5.45□□□□□ -1.54
CACNA1C-202ENST00000335762 TENM4Q6N022 2769 aa5.42□□□□□ -1.54
CACNA1C-202ENST00000335762 FRYLO94915 3013 aa5.42□□□□□ -1.54
CACNA1C-202ENST00000335762 CELSR2Q9HCU4 2923 aa5.42□□□□□ -1.54
CACNA1C-202ENST00000335762 TENM3Q9P273 2699 aa5.42□□□□□ -1.54
CACNA1C-202ENST00000335762 KRTAP1-4P0C5Y4 121 aa5.41□□□□□ -1.54
CACNA1C-202ENST00000335762 LRBAP50851 2863 aa5.4□□□□□ -1.54
CACNA1C-202ENST00000335762 ATMQ13315 3056 aa5.4□□□□□ -1.55
CACNA1C-202ENST00000335762 TPRXLQ17RH7 258 aa5.36□□□□□ -1.55
CACNA1C-202ENST00000335762 LOC400499M0QZD8 3231 aa5.34□□□□□ -1.55
CACNA1C-202ENST00000335762 LAMA5O15230 3695 aa5.34□□□□□ -1.55
CACNA1C-202ENST00000335762 NF1P21359 2839 aa5.34□□□□□ -1.55
CACNA1C-202ENST00000335762 NBEAQ8NFP9 2946 aa5.33□□□□□ -1.56
CACNA1C-202ENST00000335762 SPENQ96T58 3664 aaKnown RBP5.31□□□□□ -1.56
CACNA1C-202ENST00000335762 DCHS1Q96JQ0 3298 aa5.29□□□□□ -1.56
CACNA1C-202ENST00000335762 TNRC18O15417 2968 aaPredicted RBP5.28□□□□□ -1.56
CACNA1C-202ENST00000335762 ADGRG4Q8IZF6 3080 aa5.28□□□□□ -1.56
CACNA1C-202ENST00000335762 TENM1Q9UKZ4 2725 aa5.28□□□□□ -1.56
CACNA1C-202ENST00000335762 DCHS2Q6V1P9 2916 aa5.26□□□□□ -1.57
CACNA1C-202ENST00000335762 KRTAP12-2P59991 146 aa5.26□□□□□ -1.57
CACNA1C-202ENST00000335762 ZFHX3Q15911 3703 aa5.26□□□□□ -1.57
CACNA1C-202ENST00000335762 KRTAP13-3Q3SY46 172 aa5.25□□□□□ -1.57
CACNA1C-202ENST00000335762 ZZEF1O43149 2961 aa5.25□□□□□ -1.57
CACNA1C-202ENST00000335762 NIPBLQ6KC79 2804 aaeCLIP5.25□□□□□ -1.57
CACNA1C-202ENST00000335762 KRTAP13-4Q3LI77 160 aa5.23□□□□□ -1.57
CACNA1C-202ENST00000335762 PKD1L1Q8TDX9 2849 aa5.22□□□□□ -1.57
CACNA1C-202ENST00000335762 PDZD2O15018 2839 aa5.17□□□□□ -1.58
CACNA1C-202ENST00000335762 TGP01266 2768 aa5.17□□□□□ -1.58
CACNA1C-202ENST00000335762 SRRM2Q9UQ35 2752 aaKnown RBP5.17□□□□□ -1.58
CACNA1C-202ENST00000335762 KRTAP21-3Q3LHN1 58 aa5.16□□□□□ -1.58
CACNA1C-202ENST00000335762 MUC3AQ02505 3323 aa5.15□□□□□ -1.58
CACNA1C-202ENST00000335762 KRTAP12-1P59990 96 aa5.14□□□□□ -1.59
CACNA1C-202ENST00000335762 VWFP04275 2813 aa5.14□□□□□ -1.59
CACNA1C-202ENST00000335762 RELNP78509 3460 aa5.12□□□□□ -1.59
CACNA1C-202ENST00000335762 KRTAP15-1Q3LI76 137 aa5.12□□□□□ -1.59
CACNA1C-202ENST00000335762 CRCT1Q9UGL9 99 aa5.11□□□□□ -1.59
CACNA1C-202ENST00000335762 DMXL1Q9Y485 3027 aa5.09□□□□□ -1.59
CACNA1C-202ENST00000335762 TENM2Q9NT68 2774 aa5.09□□□□□ -1.6
CACNA1C-202ENST00000335762 CELSR1Q9NYQ6 3014 aa5.08□□□□□ -1.6
CACNA1C-202ENST00000335762 ZANQ9Y493 2812 aa5.06□□□□□ -1.6
CACNA1C-202ENST00000335762 CSMD1Q96PZ7 3565 aa5.06□□□□□ -1.6
CACNA1C-202ENST00000335762 SMG1Q96Q15 3661 aaKnown RBP5.06□□□□□ -1.6
CACNA1C-202ENST00000335762 CSMD2Q7Z408 3487 aa5.05□□□□□ -1.6
CACNA1C-202ENST00000335762 INE1O15225 51 aa5.03□□□□□ -1.6
CACNA1C-202ENST00000335762 BSNQ9UPA5 3926 aa5.02□□□□□ -1.61
CACNA1C-202ENST00000335762 FBN2P35556 2912 aa5.02□□□□□ -1.61
CACNA1C-202ENST00000335762 VPS13CQ709C8 3753 aa5.02□□□□□ -1.61
CACNA1C-202ENST00000335762 KRTAP3-1Q9BYR8 98 aa4.93□□□□□ -1.62
CACNA1C-202ENST00000335762 SVEP1Q4LDE5 3571 aa4.91□□□□□ -1.62
CACNA1C-202ENST00000335762 KRTAP10-6P60371 365 aaPredicted RBP4.87□□□□□ -1.63
CACNA1C-202ENST00000335762 CUBNO60494 3623 aa4.83□□□□□ -1.64
CACNA1C-202ENST00000335762 LORP23490 312 aaPredicted RBP4.78□□□□□ -1.64
CACNA1C-202ENST00000335762 KRTAP10-12P60413 245 aa4.75□□□□□ -1.65
CACNA1C-202ENST00000335762 FBN1P35555 2871 aaKnown RBP4.71□□□□□ -1.66
CACNA1C-202ENST00000335762 COL7A1Q02388 2944 aa4.71□□□□□ -1.66
CACNA1C-202ENST00000335762 MXRA5Q9NR99 2828 aa4.69□□□□□ -1.66
CACNA1C-202ENST00000335762 FBN3Q75N90 2809 aa4.69□□□□□ -1.66
CACNA1C-202ENST00000335762 AKAP9Q99996 3911 aa4.66□□□□□ -1.66
CACNA1C-202ENST00000335762 KRTAP12-3P60328 96 aa4.66□□□□□ -1.66
CACNA1C-202ENST00000335762 KRTAP3-2Q9BYR7 98 aa4.63□□□□□ -1.67
CACNA1C-202ENST00000335762 HRNRQ86YZ3 2850 aaPredicted RBP4.61□□□□□ -1.67
CACNA1C-202ENST00000335762 ZNF469Q96JG9 3925 aaPredicted RBP4.57□□□□□ -1.68
CACNA1C-202ENST00000335762 KRTAP23-1A1A580 65 aa4.56□□□□□ -1.68
CACNA1C-202ENST00000335762 KRTAP3-3Q9BYR6 98 aa4.56□□□□□ -1.68
CACNA1C-202ENST00000335762 KRTAP10-5P60370 271 aa4.55□□□□□ -1.68
CACNA1C-202ENST00000335762 MEGF8Q7Z7M0 2845 aa4.54□□□□□ -1.68
CACNA1C-202ENST00000335762 KRTAP4-5Q9BYR2 181 aa4.53□□□□□ -1.68
CACNA1C-202ENST00000335762 LCE3AQ5TA76 89 aa4.53□□□□□ -1.68
CACNA1C-202ENST00000335762 CSMD3Q7Z407 3707 aa4.51□□□□□ -1.69
CACNA1C-202ENST00000335762 TRRAPQ9Y4A5 3859 aa4.47□□□□□ -1.69
CACNA1C-202ENST00000335762 MT1HL1P0DM35 61 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms