RNA–Protein interactions for RNA: ENST00000334126.11

C2CD3-202, Transcript of C2 calcium dependent domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C2CD3, Length 7,960 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-202ENST00000334126 FREM2Q5SZK8 3169 aa5.06□□□□□ -1.6
C2CD3-202ENST00000334126 ASH1LQ9NR48 2969 aaKnown RBP5.06□□□□□ -1.6
C2CD3-202ENST00000334126 Q6ZRN7 208 aaPredicted RBP5.06□□□□□ -1.6
C2CD3-202ENST00000334126 TGP01266 2768 aa5.05□□□□□ -1.6
C2CD3-202ENST00000334126 CELSR3Q9NYQ7 3312 aa5.05□□□□□ -1.6
C2CD3-202ENST00000334126 WDFY4Q6ZS81 3184 aa5.05□□□□□ -1.6
C2CD3-202ENST00000334126 FLNCQ14315 2725 aa5.04□□□□□ -1.6
C2CD3-202ENST00000334126 IGSF10Q6WRI0 2623 aa5.03□□□□□ -1.6
C2CD3-202ENST00000334126 VCANP13611 3396 aa5.03□□□□□ -1.6
C2CD3-202ENST00000334126 BRCA2P51587 3418 aa5.03□□□□□ -1.6
C2CD3-202ENST00000334126 COL12A1Q99715 3063 aa5.03□□□□□ -1.6
C2CD3-202ENST00000334126 TNP1P09430 55 aa5□□□□□ -1.61
C2CD3-202ENST00000334126 UNC80Q8N2C7 3258 aa4.98□□□□□ -1.61
C2CD3-202ENST00000334126 KRTAP13-2Q52LG2 175 aa4.97□□□□□ -1.61
C2CD3-202ENST00000334126 XIRP2A4UGR9 3374 aa4.97□□□□□ -1.61
C2CD3-202ENST00000334126 ZANQ9Y493 2812 aa4.97□□□□□ -1.61
C2CD3-202ENST00000334126 MXRA5Q9NR99 2828 aa4.96□□□□□ -1.61
C2CD3-202ENST00000334126 NF1P21359 2839 aa4.95□□□□□ -1.62
C2CD3-202ENST00000334126 USP34Q70CQ2 3546 aa4.95□□□□□ -1.62
C2CD3-202ENST00000334126 KRTAP15-1Q3LI76 137 aa4.95□□□□□ -1.62
C2CD3-202ENST00000334126 BOD1L1Q8NFC6 3051 aa4.93□□□□□ -1.62
C2CD3-202ENST00000334126 LAMA3Q16787 3333 aa4.93□□□□□ -1.62
C2CD3-202ENST00000334126 HIVEP1P15822 2718 aa4.92□□□□□ -1.62
C2CD3-202ENST00000334126 C10orf95Q9H7T3 257 aa4.91□□□□□ -1.62
C2CD3-202ENST00000334126 CDH23Q9H251 3354 aa4.91□□□□□ -1.62
C2CD3-202ENST00000334126 CELSR2Q9HCU4 2923 aa4.91□□□□□ -1.62
C2CD3-202ENST00000334126 INE1O15225 51 aa4.9□□□□□ -1.62
C2CD3-202ENST00000334126 FBN2P35556 2912 aa4.9□□□□□ -1.62
C2CD3-202ENST00000334126 COL6A3P12111 3177 aa4.89□□□□□ -1.63
C2CD3-202ENST00000334126 DMXL2Q8TDJ6 3036 aa4.87□□□□□ -1.63
C2CD3-202ENST00000334126 SRRM2Q9UQ35 2752 aaKnown RBP4.86□□□□□ -1.63
C2CD3-202ENST00000334126 PDZD2O15018 2839 aa4.86□□□□□ -1.63
C2CD3-202ENST00000334126 ALMS1Q8TCU4 4167 aa4.85□□□□□ -1.63
C2CD3-202ENST00000334126 TENM2Q9NT68 2774 aa4.84□□□□□ -1.63
C2CD3-202ENST00000334126 KRTAP10-1P60331 282 aa4.84□□□□□ -1.63
C2CD3-202ENST00000334126 TPRXLQ17RH7 258 aa4.83□□□□□ -1.64
C2CD3-202ENST00000334126 KRTAP10-2P60368 255 aa4.81□□□□□ -1.64
C2CD3-202ENST00000334126 DCHS2Q6V1P9 2916 aa4.79□□□□□ -1.64
C2CD3-202ENST00000334126 SPTBN5Q9NRC6 3674 aaKnown RBP4.79□□□□□ -1.64
C2CD3-202ENST00000334126 CFAP47Q6ZTR5 3102 aa4.78□□□□□ -1.64
C2CD3-202ENST00000334126 ATMQ13315 3056 aa4.78□□□□□ -1.64
C2CD3-202ENST00000334126 CRYBG3Q68DQ2 2970 aa4.78□□□□□ -1.64
C2CD3-202ENST00000334126 SZT2Q5T011 3432 aa4.77□□□□□ -1.65
C2CD3-202ENST00000334126 KRTAP1-4P0C5Y4 121 aa4.77□□□□□ -1.65
C2CD3-202ENST00000334126 KRTAP13-4Q3LI77 160 aa4.76□□□□□ -1.65
C2CD3-202ENST00000334126 PRO2289Q9P1D8 64 aa4.76□□□□□ -1.65
C2CD3-202ENST00000334126 CELSR1Q9NYQ6 3014 aa4.76□□□□□ -1.65
C2CD3-202ENST00000334126 XP32Q5T750 250 aa4.74□□□□□ -1.65
C2CD3-202ENST00000334126 KRTAP12-1P59990 96 aa4.72□□□□□ -1.65
C2CD3-202ENST00000334126 A0A1B0GVY2 172 aa4.72□□□□□ -1.65
C2CD3-202ENST00000334126 VWFP04275 2813 aa4.71□□□□□ -1.65
C2CD3-202ENST00000334126 TENM3Q9P273 2699 aa4.71□□□□□ -1.65
C2CD3-202ENST00000334126 KRTAP12-2P59991 146 aa4.71□□□□□ -1.66
C2CD3-202ENST00000334126 ZFHX4Q86UP3 3567 aa4.69□□□□□ -1.66
C2CD3-202ENST00000334126 KRTAP23-1A1A580 65 aa4.68□□□□□ -1.66
C2CD3-202ENST00000334126 LOC400499M0QZD8 3231 aa4.68□□□□□ -1.66
C2CD3-202ENST00000334126 KRTAP10-8P60410 259 aa4.68□□□□□ -1.66
C2CD3-202ENST00000334126 WDFY3Q8IZQ1 3526 aa4.66□□□□□ -1.66
C2CD3-202ENST00000334126 KRTAP10-6P60371 365 aaPredicted RBP4.62□□□□□ -1.67
C2CD3-202ENST00000334126 DCHS1Q96JQ0 3298 aa4.6□□□□□ -1.67
C2CD3-202ENST00000334126 TENM1Q9UKZ4 2725 aa4.6□□□□□ -1.67
C2CD3-202ENST00000334126 DMDP11532 3685 aa4.59□□□□□ -1.67
C2CD3-202ENST00000334126 CSMD1Q96PZ7 3565 aa4.58□□□□□ -1.68
C2CD3-202ENST00000334126 KRTAP3-1Q9BYR8 98 aa4.58□□□□□ -1.68
C2CD3-202ENST00000334126 AKAP9Q99996 3911 aa4.57□□□□□ -1.68
C2CD3-202ENST00000334126 PKD1L1Q8TDX9 2849 aa4.57□□□□□ -1.68
C2CD3-202ENST00000334126 SPEGQ15772 3267 aa4.56□□□□□ -1.68
C2CD3-202ENST00000334126 MYO15AQ9UKN7 3530 aa4.56□□□□□ -1.68
C2CD3-202ENST00000334126 NBPF19A0A087WUL8 3843 aa4.54□□□□□ -1.68
C2CD3-202ENST00000334126 TENM4Q6N022 2769 aa4.54□□□□□ -1.68
C2CD3-202ENST00000334126 SMG1Q96Q15 3661 aaKnown RBP4.53□□□□□ -1.68
C2CD3-202ENST00000334126 LAMA5O15230 3695 aa4.48□□□□□ -1.69
C2CD3-202ENST00000334126 KRTAP10-10P60014 251 aa4.47□□□□□ -1.69
C2CD3-202ENST00000334126 SPENQ96T58 3664 aaKnown RBP4.47□□□□□ -1.69
C2CD3-202ENST00000334126 COL7A1Q02388 2944 aa4.46□□□□□ -1.7
C2CD3-202ENST00000334126 MEGF8Q7Z7M0 2845 aa4.46□□□□□ -1.7
C2CD3-202ENST00000334126 KRTAP3-2Q9BYR7 98 aa4.44□□□□□ -1.7
C2CD3-202ENST00000334126 EYSQ5T1H1 3165 aa4.44□□□□□ -1.7
C2CD3-202ENST00000334126 ASPMQ8IZT6 3477 aa4.42□□□□□ -1.7
C2CD3-202ENST00000334126 VPS13CQ709C8 3753 aa4.38□□□□□ -1.71
C2CD3-202ENST00000334126 BSNQ9UPA5 3926 aa4.38□□□□□ -1.71
C2CD3-202ENST00000334126 KRTAP3-3Q9BYR6 98 aa4.36□□□□□ -1.71
C2CD3-202ENST00000334126 FBN3Q75N90 2809 aa4.36□□□□□ -1.71
C2CD3-202ENST00000334126 FBN1P35555 2871 aaKnown RBP4.34□□□□□ -1.71
C2CD3-202ENST00000334126 RELNP78509 3460 aa4.33□□□□□ -1.72
C2CD3-202ENST00000334126 SVEP1Q4LDE5 3571 aa4.29□□□□□ -1.72
C2CD3-202ENST00000334126 OTOGQ6ZRI0 2925 aa4.25□□□□□ -1.73
C2CD3-202ENST00000334126 CRCT1Q9UGL9 99 aa4.24□□□□□ -1.73
C2CD3-202ENST00000334126 TRRAPQ9Y4A5 3859 aa4.24□□□□□ -1.73
C2CD3-202ENST00000334126 CMYA5Q8N3K9 4069 aa4.23□□□□□ -1.73
C2CD3-202ENST00000334126 KRTAP21-3Q3LHN1 58 aa4.22□□□□□ -1.73
C2CD3-202ENST00000334126 DNAH3Q8TD57 4116 aa4.15□□□□□ -1.74
C2CD3-202ENST00000334126 MUC3AQ02505 3323 aa4.14□□□□□ -1.75
C2CD3-202ENST00000334126 CSMD2Q7Z408 3487 aa4.07□□□□□ -1.76
C2CD3-202ENST00000334126 HECTD4Q9Y4D8 3996 aa4.03□□□□□ -1.76
C2CD3-202ENST00000334126 LYSTQ99698 3801 aa4.01□□□□□ -1.77
C2CD3-202ENST00000334126 CUBNO60494 3623 aa4□□□□□ -1.77
C2CD3-202ENST00000334126 DNAH6Q9C0G6 4158 aa4□□□□□ -1.77
C2CD3-202ENST00000334126 KRTAP19-4Q3LI73 84 aa4□□□□□ -1.77
C2CD3-202ENST00000334126 ANK3Q12955 4377 aaKnown RBP3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms