RNA–Protein interactions for RNA: ENST00000334035.9

CPEB4-202, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 6,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-202ENST00000334035 CDH23Q9H251 3354 aa3.19□□□□□ -1.9
CPEB4-202ENST00000334035 ITPR1Q14643 2758 aa3.18□□□□□ -1.9
CPEB4-202ENST00000334035 LAMA3Q16787 3333 aa3.18□□□□□ -1.9
CPEB4-202ENST00000334035 KRTAP3-2Q9BYR7 98 aa3.18□□□□□ -1.9
CPEB4-202ENST00000334035 RANBP2P49792 3224 aaKnown RBP3.17□□□□□ -1.9
CPEB4-202ENST00000334035 LRBAP50851 2863 aa3.17□□□□□ -1.9
CPEB4-202ENST00000334035 DSPP15924 2871 aaKnown RBP3.17□□□□□ -1.9
CPEB4-202ENST00000334035 KRTAP10-10P60014 251 aa3.16□□□□□ -1.9
CPEB4-202ENST00000334035 APCP25054 2843 aa3.15□□□□□ -1.91
CPEB4-202ENST00000334035 SPTBN5Q9NRC6 3674 aaKnown RBP3.14□□□□□ -1.91
CPEB4-202ENST00000334035 STAB1Q9NY15 2570 aa3.14□□□□□ -1.91
CPEB4-202ENST00000334035 UTP20O75691 2785 aaKnown RBP3.14□□□□□ -1.91
CPEB4-202ENST00000334035 VCANP13611 3396 aa3.14□□□□□ -1.91
CPEB4-202ENST00000334035 HRNRQ86YZ3 2850 aaPredicted RBP3.13□□□□□ -1.91
CPEB4-202ENST00000334035 WDFY4Q6ZS81 3184 aa3.13□□□□□ -1.91
CPEB4-202ENST00000334035 COL6A3P12111 3177 aa3.13□□□□□ -1.91
CPEB4-202ENST00000334035 KRTAP3-3Q9BYR6 98 aa3.13□□□□□ -1.91
CPEB4-202ENST00000334035 CELSR3Q9NYQ7 3312 aa3.13□□□□□ -1.91
CPEB4-202ENST00000334035 NBEAQ8NFP9 2946 aa3.13□□□□□ -1.91
CPEB4-202ENST00000334035 VPS13AQ96RL7 3174 aa3.12□□□□□ -1.91
CPEB4-202ENST00000334035 XIRP2A4UGR9 3374 aa3.11□□□□□ -1.91
CPEB4-202ENST00000334035 ITPR2Q14571 2701 aa3.11□□□□□ -1.91
CPEB4-202ENST00000334035 COL6A5A8TX70 2615 aa3.11□□□□□ -1.91
CPEB4-202ENST00000334035 LAMA1P25391 3075 aa3.11□□□□□ -1.91
CPEB4-202ENST00000334035 USP34Q70CQ2 3546 aa3.11□□□□□ -1.91
CPEB4-202ENST00000334035 NIPBLQ6KC79 2804 aaeCLIP3.1□□□□□ -1.91
CPEB4-202ENST00000334035 SZT2Q5T011 3432 aa3.09□□□□□ -1.91
CPEB4-202ENST00000334035 NOTCH1P46531 2555 aa3.08□□□□□ -1.92
CPEB4-202ENST00000334035 UBR5O95071 2799 aaPredicted RBP3.07□□□□□ -1.92
CPEB4-202ENST00000334035 ADGRG4Q8IZF6 3080 aa3.06□□□□□ -1.92
CPEB4-202ENST00000334035 PRUNE2Q8WUY3 3088 aa3.06□□□□□ -1.92
CPEB4-202ENST00000334035 FREM2Q5SZK8 3169 aa3.04□□□□□ -1.92
CPEB4-202ENST00000334035 ATMQ13315 3056 aa3.03□□□□□ -1.92
CPEB4-202ENST00000334035 TGP01266 2768 aa3.03□□□□□ -1.92
CPEB4-202ENST00000334035 FRYLO94915 3013 aa3.01□□□□□ -1.93
CPEB4-202ENST00000334035 HIVEP1P15822 2718 aa3□□□□□ -1.93
CPEB4-202ENST00000334035 EYSQ5T1H1 3165 aa3□□□□□ -1.93
CPEB4-202ENST00000334035 TACC2O95359 2948 aa3□□□□□ -1.93
CPEB4-202ENST00000334035 BOD1L1Q8NFC6 3051 aa3□□□□□ -1.93
CPEB4-202ENST00000334035 TNRC18O15417 2968 aaPredicted RBP2.99□□□□□ -1.93
CPEB4-202ENST00000334035 FLNCQ14315 2725 aa2.99□□□□□ -1.93
CPEB4-202ENST00000334035 ANK3Q12955 4377 aaKnown RBP2.99□□□□□ -1.93
CPEB4-202ENST00000334035 REV3LO60673 3130 aa2.97□□□□□ -1.93
CPEB4-202ENST00000334035 ASH1LQ9NR48 2969 aaKnown RBP2.96□□□□□ -1.94
CPEB4-202ENST00000334035 COL12A1Q99715 3063 aa2.95□□□□□ -1.94
CPEB4-202ENST00000334035 CRYBG3Q68DQ2 2970 aa2.94□□□□□ -1.94
CPEB4-202ENST00000334035 DNAH2Q9P225 4427 aa2.94□□□□□ -1.94
CPEB4-202ENST00000334035 ALMS1Q8TCU4 4167 aa2.94□□□□□ -1.94
CPEB4-202ENST00000334035 KRTAP10-4P60372 401 aaPredicted RBP2.94□□□□□ -1.94
CPEB4-202ENST00000334035 HUWE1Q7Z6Z7 4374 aaKnown RBP2.94□□□□□ -1.94
CPEB4-202ENST00000334035 ZFHX4Q86UP3 3567 aa2.94□□□□□ -1.94
CPEB4-202ENST00000334035 TENM4Q6N022 2769 aa2.93□□□□□ -1.94
CPEB4-202ENST00000334035 WDFY3Q8IZQ1 3526 aa2.92□□□□□ -1.94
CPEB4-202ENST00000334035 DMXL2Q8TDJ6 3036 aa2.92□□□□□ -1.94
CPEB4-202ENST00000334035 DCHS1Q96JQ0 3298 aa2.91□□□□□ -1.94
CPEB4-202ENST00000334035 ZFHX3Q15911 3703 aa2.91□□□□□ -1.94
CPEB4-202ENST00000334035 CFAP47Q6ZTR5 3102 aa2.9□□□□□ -1.94
CPEB4-202ENST00000334035 MT1HL1P0DM35 61 aa2.89□□□□□ -1.95
CPEB4-202ENST00000334035 SPEGQ15772 3267 aa2.89□□□□□ -1.95
CPEB4-202ENST00000334035 KRTAP10-12P60413 245 aa2.89□□□□□ -1.95
CPEB4-202ENST00000334035 TENM3Q9P273 2699 aa2.89□□□□□ -1.95
CPEB4-202ENST00000334035 ZANQ9Y493 2812 aa2.88□□□□□ -1.95
CPEB4-202ENST00000334035 TENM2Q9NT68 2774 aa2.87□□□□□ -1.95
CPEB4-202ENST00000334035 CSMD1Q96PZ7 3565 aa2.87□□□□□ -1.95
CPEB4-202ENST00000334035 MYO15AQ9UKN7 3530 aa2.87□□□□□ -1.95
CPEB4-202ENST00000334035 FBN2P35556 2912 aa2.86□□□□□ -1.95
CPEB4-202ENST00000334035 KRTAP12-3P60328 96 aa2.86□□□□□ -1.95
CPEB4-202ENST00000334035 CELSR2Q9HCU4 2923 aa2.86□□□□□ -1.95
CPEB4-202ENST00000334035 DCHS2Q6V1P9 2916 aa2.85□□□□□ -1.95
CPEB4-202ENST00000334035 ASPMQ8IZT6 3477 aa2.85□□□□□ -1.95
CPEB4-202ENST00000334035 MXRA5Q9NR99 2828 aa2.85□□□□□ -1.95
CPEB4-202ENST00000334035 LOC400499M0QZD8 3231 aa2.84□□□□□ -1.96
CPEB4-202ENST00000334035 PDZD2O15018 2839 aa2.84□□□□□ -1.96
CPEB4-202ENST00000334035 NF1P21359 2839 aa2.84□□□□□ -1.96
CPEB4-202ENST00000334035 LCE3AQ5TA76 89 aa2.83□□□□□ -1.96
CPEB4-202ENST00000334035 SMG1Q96Q15 3661 aaKnown RBP2.83□□□□□ -1.96
CPEB4-202ENST00000334035 CELSR1Q9NYQ6 3014 aa2.82□□□□□ -1.96
CPEB4-202ENST00000334035 DMXL1Q9Y485 3027 aa2.81□□□□□ -1.96
CPEB4-202ENST00000334035 DNAH11Q96DT5 4516 aa2.81□□□□□ -1.96
CPEB4-202ENST00000334035 AKAP9Q99996 3911 aa2.79□□□□□ -1.96
CPEB4-202ENST00000334035 KRTAP4-5Q9BYR2 181 aa2.79□□□□□ -1.96
CPEB4-202ENST00000334035 DNAH10Q8IVF4 4471 aa2.78□□□□□ -1.96
CPEB4-202ENST00000334035 LORP23490 312 aaPredicted RBP2.78□□□□□ -1.96
CPEB4-202ENST00000334035 KRTAP19-4Q3LI73 84 aa2.76□□□□□ -1.97
CPEB4-202ENST00000334035 DNAH17Q9UFH2 4485 aa2.76□□□□□ -1.97
CPEB4-202ENST00000334035 RELNP78509 3460 aa2.75□□□□□ -1.97
CPEB4-202ENST00000334035 BSNQ9UPA5 3926 aa2.74□□□□□ -1.97
CPEB4-202ENST00000334035 LCE2DQ5TA82 110 aaPredicted RBP2.74□□□□□ -1.97
CPEB4-202ENST00000334035 CRCT1Q9UGL9 99 aa2.7□□□□□ -1.98
CPEB4-202ENST00000334035 DMDP11532 3685 aa2.7□□□□□ -1.98
CPEB4-202ENST00000334035 DNAH3Q8TD57 4116 aa2.7□□□□□ -1.98
CPEB4-202ENST00000334035 LAMA5O15230 3695 aa2.7□□□□□ -1.98
CPEB4-202ENST00000334035 NBPF19A0A087WUL8 3843 aa2.7□□□□□ -1.98
CPEB4-202ENST00000334035 SPRR5A0A1B0GTR4 108 aa2.69□□□□□ -1.98
CPEB4-202ENST00000334035 SVEP1Q4LDE5 3571 aa2.69□□□□□ -1.98
CPEB4-202ENST00000334035 DNAH1Q9P2D7 4330 aa2.69□□□□□ -1.98
CPEB4-202ENST00000334035 VWFP04275 2813 aa2.68□□□□□ -1.98
CPEB4-202ENST00000334035 SPRR2GQ9BYE4 73 aa2.68□□□□□ -1.98
CPEB4-202ENST00000334035 TENM1Q9UKZ4 2725 aa2.67□□□□□ -1.98
CPEB4-202ENST00000334035 VPS13DQ5THJ4 4388 aa2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms