RNA–Protein interactions for RNA: ENST00000328913.7

MCF2L2-201, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

APPRIS P2 TSL 5 BASIC

Gene MCF2L2, Length 4,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-201ENST00000328913 ZANQ9Y493 2812 aa9.26□□□□□ -0.93
MCF2L2-201ENST00000328913 KRTAP11-1Q8IUC1 163 aa9.24□□□□□ -0.93
MCF2L2-201ENST00000328913 A6NN06 94 aa9.24□□□□□ -0.93
MCF2L2-201ENST00000328913 CRYBG3Q68DQ2 2970 aa9.24□□□□□ -0.93
MCF2L2-201ENST00000328913 M0R2T5 61 aa9.21□□□□□ -0.94
MCF2L2-201ENST00000328913 CFAP47Q6ZTR5 3102 aa9.19□□□□□ -0.94
MCF2L2-201ENST00000328913 R4GN34 69 aa9.19□□□□□ -0.94
MCF2L2-201ENST00000328913 DMXL1Q9Y485 3027 aa9.19□□□□□ -0.94
MCF2L2-201ENST00000328913 DCHS2Q6V1P9 2916 aa9.17□□□□□ -0.94
MCF2L2-201ENST00000328913 SEC61BP60468 96 aaKnown RBP9.15□□□□□ -0.95
MCF2L2-201ENST00000328913 Q6ZRN7 208 aaPredicted RBP9.15□□□□□ -0.95
MCF2L2-201ENST00000328913 A8MU10 97 aa9.11□□□□□ -0.95
MCF2L2-201ENST00000328913 KRTAP13-1Q8IUC0 172 aa9.1□□□□□ -0.95
MCF2L2-201ENST00000328913 A0A0A0MQY5 61 aa9.09□□□□□ -0.95
MCF2L2-201ENST00000328913 KRTAP21-3Q3LHN1 58 aa9.07□□□□□ -0.96
MCF2L2-201ENST00000328913 M0QZ58 72 aa9.03□□□□□ -0.96
MCF2L2-201ENST00000328913 KRTAP25-1Q3LHN0 102 aa9.01□□□□□ -0.97
MCF2L2-201ENST00000328913 ADM2Q7Z4H4 148 aa9.01□□□□□ -0.97
MCF2L2-201ENST00000328913 NF1P21359 2839 aa9.01□□□□□ -0.97
MCF2L2-201ENST00000328913 SPEGQ15772 3267 aa9□□□□□ -0.97
MCF2L2-201ENST00000328913 RPS29P62273 56 aaKnown RBP8.99□□□□□ -0.97
MCF2L2-201ENST00000328913 USP34Q70CQ2 3546 aa8.98□□□□□ -0.97
MCF2L2-201ENST00000328913 KRTAP13-2Q52LG2 175 aa8.96□□□□□ -0.97
MCF2L2-201ENST00000328913 SPTBN5Q9NRC6 3674 aaKnown RBP8.95□□□□□ -0.98
MCF2L2-201ENST00000328913 LOC400499M0QZD8 3231 aa8.95□□□□□ -0.98
MCF2L2-201ENST00000328913 FBN2P35556 2912 aa8.94□□□□□ -0.98
MCF2L2-201ENST00000328913 HRNRQ86YZ3 2850 aaPredicted RBP8.94□□□□□ -0.98
MCF2L2-201ENST00000328913 TENM3Q9P273 2699 aa8.9□□□□□ -0.98
MCF2L2-201ENST00000328913 TENM1Q9UKZ4 2725 aa8.81□□□□□ -1
MCF2L2-201ENST00000328913 KRTAP16-1A8MUX0 517 aa8.77□□□□□ -1.01
MCF2L2-201ENST00000328913 MYO15AQ9UKN7 3530 aa8.76□□□□□ -1.01
MCF2L2-201ENST00000328913 MXRA5Q9NR99 2828 aa8.75□□□□□ -1.01
MCF2L2-201ENST00000328913 A8MUU9 505 aa8.72□□□□□ -1.01
MCF2L2-201ENST00000328913 NDUFAF8A1L188 74 aa8.69□□□□□ -1.02
MCF2L2-201ENST00000328913 DCHS1Q96JQ0 3298 aa8.68□□□□□ -1.02
MCF2L2-201ENST00000328913 C20orf166-AS1Q96NR2 134 aa8.68□□□□□ -1.02
MCF2L2-201ENST00000328913 TENM2Q9NT68 2774 aa8.66□□□□□ -1.02
MCF2L2-201ENST00000328913 PKD1L1Q8TDX9 2849 aa8.65□□□□□ -1.03
MCF2L2-201ENST00000328913 PLAC4Q8WY50 150 aa8.64□□□□□ -1.03
MCF2L2-201ENST00000328913 CELSR1Q9NYQ6 3014 aa8.63□□□□□ -1.03
MCF2L2-201ENST00000328913 KRTAP1-4P0C5Y4 121 aa8.55□□□□□ -1.04
MCF2L2-201ENST00000328913 RELNP78509 3460 aa8.54□□□□□ -1.04
MCF2L2-201ENST00000328913 H0YAA0 97 aa8.52□□□□□ -1.05
MCF2L2-201ENST00000328913 TGP01266 2768 aa8.44□□□□□ -1.06
MCF2L2-201ENST00000328913 VWFP04275 2813 aa8.42□□□□□ -1.06
MCF2L2-201ENST00000328913 C10orf95Q9H7T3 257 aa8.41□□□□□ -1.06
MCF2L2-201ENST00000328913 TNP1P09430 55 aa8.4□□□□□ -1.06
MCF2L2-201ENST00000328913 PDZD2O15018 2839 aa8.4□□□□□ -1.06
MCF2L2-201ENST00000328913 WDFY3Q8IZQ1 3526 aa8.36□□□□□ -1.07
MCF2L2-201ENST00000328913 FBN1P35555 2871 aaKnown RBP8.35□□□□□ -1.07
MCF2L2-201ENST00000328913 XP32Q5T750 250 aa8.35□□□□□ -1.07
MCF2L2-201ENST00000328913 KRTAP13-3Q3SY46 172 aa8.34□□□□□ -1.07
MCF2L2-201ENST00000328913 PP632Q6XCG6 107 aa8.32□□□□□ -1.08
MCF2L2-201ENST00000328913 OTOGQ6ZRI0 2925 aa8.28□□□□□ -1.08
MCF2L2-201ENST00000328913 P0C880 135 aa8.28□□□□□ -1.08
MCF2L2-201ENST00000328913 LAMA5O15230 3695 aa8.27□□□□□ -1.09
MCF2L2-201ENST00000328913 MUC3AQ02505 3323 aa8.22□□□□□ -1.09
MCF2L2-201ENST00000328913 TPRXLQ17RH7 258 aa8.22□□□□□ -1.09
MCF2L2-201ENST00000328913 SRRM2Q9UQ35 2752 aaKnown RBP8.19□□□□□ -1.1
MCF2L2-201ENST00000328913 ASPMQ8IZT6 3477 aa8.16□□□□□ -1.1
MCF2L2-201ENST00000328913 A0A1B0GVY2 172 aa8.15□□□□□ -1.1
MCF2L2-201ENST00000328913 ZFHX3Q15911 3703 aa8.14□□□□□ -1.11
MCF2L2-201ENST00000328913 NBPF19A0A087WUL8 3843 aa8.11□□□□□ -1.11
MCF2L2-201ENST00000328913 KRTAP10-8P60410 259 aa8.1□□□□□ -1.11
MCF2L2-201ENST00000328913 ZFHX4Q86UP3 3567 aa8.07□□□□□ -1.12
MCF2L2-201ENST00000328913 DMDP11532 3685 aa7.98□□□□□ -1.13
MCF2L2-201ENST00000328913 KRTAP10-10P60014 251 aa7.92□□□□□ -1.14
MCF2L2-201ENST00000328913 KRTAP12-2P59991 146 aa7.91□□□□□ -1.14
MCF2L2-201ENST00000328913 CSMD1Q96PZ7 3565 aa7.9□□□□□ -1.14
MCF2L2-201ENST00000328913 FBN3Q75N90 2809 aa7.9□□□□□ -1.14
MCF2L2-201ENST00000328913 SMG1Q96Q15 3661 aaKnown RBP7.87□□□□□ -1.15
MCF2L2-201ENST00000328913 KRTAP3-1Q9BYR8 98 aa7.87□□□□□ -1.15
MCF2L2-201ENST00000328913 KRTAP12-1P59990 96 aa7.82□□□□□ -1.16
MCF2L2-201ENST00000328913 CSMD2Q7Z408 3487 aa7.82□□□□□ -1.16
MCF2L2-201ENST00000328913 COL7A1Q02388 2944 aa7.77□□□□□ -1.17
MCF2L2-201ENST00000328913 KRTAP13-4Q3LI77 160 aa7.73□□□□□ -1.17
MCF2L2-201ENST00000328913 ANK3Q12955 4377 aaKnown RBP7.72□□□□□ -1.17
MCF2L2-201ENST00000328913 MEGF8Q7Z7M0 2845 aa7.71□□□□□ -1.17
MCF2L2-201ENST00000328913 KRTAP10-6P60371 365 aaPredicted RBP7.68□□□□□ -1.18
MCF2L2-201ENST00000328913 PRO2289Q9P1D8 64 aa7.68□□□□□ -1.18
MCF2L2-201ENST00000328913 SVEP1Q4LDE5 3571 aa7.66□□□□□ -1.18
MCF2L2-201ENST00000328913 CUBNO60494 3623 aa7.66□□□□□ -1.18
MCF2L2-201ENST00000328913 TRRAPQ9Y4A5 3859 aa7.65□□□□□ -1.18
MCF2L2-201ENST00000328913 SPENQ96T58 3664 aaKnown RBP7.56□□□□□ -1.2
MCF2L2-201ENST00000328913 MT1HL1P0DM35 61 aa7.47□□□□□ -1.21
MCF2L2-201ENST00000328913 KRTAP3-2Q9BYR7 98 aa7.41□□□□□ -1.22
MCF2L2-201ENST00000328913 KRTAP3-3Q9BYR6 98 aa7.38□□□□□ -1.23
MCF2L2-201ENST00000328913 KRTAP15-1Q3LI76 137 aa7.38□□□□□ -1.23
MCF2L2-201ENST00000328913 BSNQ9UPA5 3926 aa7.34□□□□□ -1.23
MCF2L2-201ENST00000328913 KRTAP10-4P60372 401 aaPredicted RBP7.31□□□□□ -1.24
MCF2L2-201ENST00000328913 KRTAP4-5Q9BYR2 181 aa7.3□□□□□ -1.24
MCF2L2-201ENST00000328913 HUWE1Q7Z6Z7 4374 aaKnown RBP7.21□□□□□ -1.26
MCF2L2-201ENST00000328913 INE1O15225 51 aa7.06□□□□□ -1.28
MCF2L2-201ENST00000328913 VPS13CQ709C8 3753 aa7.05□□□□□ -1.28
MCF2L2-201ENST00000328913 KRTAP23-1A1A580 65 aa6.95□□□□□ -1.3
MCF2L2-201ENST00000328913 DNAH9Q9NYC9 4486 aa6.93□□□□□ -1.3
MCF2L2-201ENST00000328913 DNHD1Q96M86 4753 aa6.93□□□□□ -1.3
MCF2L2-201ENST00000328913 KRTAP10-12P60413 245 aa6.92□□□□□ -1.3
MCF2L2-201ENST00000328913 ZNF469Q96JG9 3925 aaPredicted RBP6.92□□□□□ -1.3
MCF2L2-201ENST00000328913 DNAH5Q8TE73 4624 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms