RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 MT1HL1P0DM35 61 aa10.85□□□□□ -0.67
EXOSC3-201ENST00000327304 HCG22E2RYF7 251 aa10.84□□□□□ -0.67
EXOSC3-201ENST00000327304 NDUFB1O75438 58 aa10.83□□□□□ -0.68
EXOSC3-201ENST00000327304 ASB16-AS1Q495Z4 193 aa10.83□□□□□ -0.68
EXOSC3-201ENST00000327304 LINC00304Q8N9R0 145 aa10.82□□□□□ -0.68
EXOSC3-201ENST00000327304 KRTAP29-1A8MX34 341 aaPredicted RBP10.81□□□□□ -0.68
EXOSC3-201ENST00000327304 Q5XG85 94 aa10.8□□□□□ -0.68
EXOSC3-201ENST00000327304 OCR1Q9BZK8 76 aa10.79□□□□□ -0.68
EXOSC3-201ENST00000327304 C4orf48Q5BLP8 95 aa10.77□□□□□ -0.68
EXOSC3-201ENST00000327304 PCLOQ9Y6V0 5065 aa10.76□□□□□ -0.69
EXOSC3-201ENST00000327304 SPAG11AQ6PDA7 123 aa10.74□□□□□ -0.69
EXOSC3-201ENST00000327304 SPINK1P00995 79 aa10.73□□□□□ -0.69
EXOSC3-201ENST00000327304 CASC2Q6XLA1 102 aa10.73□□□□□ -0.69
EXOSC3-201ENST00000327304 WFDC13Q8IUB5 93 aa10.73□□□□□ -0.69
EXOSC3-201ENST00000327304 LIMD2Q9BT23 127 aa10.73□□□□□ -0.69
EXOSC3-201ENST00000327304 A0A1B0GVX0 72 aa10.72□□□□□ -0.69
EXOSC3-201ENST00000327304 DMBT1Q9UGM3 2413 aaPredicted RBP10.72□□□□□ -0.69
EXOSC3-201ENST00000327304 MMP24-AS1A0A0U1RRL7 71 aa10.72□□□□□ -0.69
EXOSC3-201ENST00000327304 C20orf197Q8N268 126 aa10.7□□□□□ -0.7
EXOSC3-201ENST00000327304 J3QL48 77 aa10.69□□□□□ -0.7
EXOSC3-201ENST00000327304 C8orf17Q9NRJ1 99 aa10.68□□□□□ -0.7
EXOSC3-201ENST00000327304 hDV103S1A0JD37 113 aa10.67□□□□□ -0.7
EXOSC3-201ENST00000327304 RPS29P62273 56 aaKnown RBP10.67□□□□□ -0.7
EXOSC3-201ENST00000327304 IGHV6-1A0A0B4J1U7 121 aa10.66□□□□□ -0.7
EXOSC3-201ENST00000327304 KLKP1Q107X0 134 aa10.66□□□□□ -0.7
EXOSC3-201ENST00000327304 C1orf195Q5TG92 126 aa10.65□□□□□ -0.7
EXOSC3-201ENST00000327304 TMEM254Q8TBM7 123 aa10.63□□□□□ -0.71
EXOSC3-201ENST00000327304 CYSTM1Q9H1C7 97 aa10.63□□□□□ -0.71
EXOSC3-201ENST00000327304 C5orf47Q569G3 176 aa10.61□□□□□ -0.71
EXOSC3-201ENST00000327304 C8orf87E5RJ46 101 aa10.6□□□□□ -0.71
EXOSC3-201ENST00000327304 A0A0U1RQV1 116 aa10.58□□□□□ -0.72
EXOSC3-201ENST00000327304 RETNLBQ9BQ08 111 aa10.58□□□□□ -0.72
EXOSC3-201ENST00000327304 SNURFQ9Y675 71 aa10.58□□□□□ -0.72
EXOSC3-201ENST00000327304 MRPL34Q9BQ48 92 aaKnown RBP10.57□□□□□ -0.72
EXOSC3-201ENST00000327304 NDUFC1O43677 76 aa10.56□□□□□ -0.72
EXOSC3-201ENST00000327304 NOTCH2NLQ7Z3S9 236 aa10.56□□□□□ -0.72
EXOSC3-201ENST00000327304 TP53AIP1Q9HCN2 124 aa10.55□□□□□ -0.72
EXOSC3-201ENST00000327304 TMEM258P61165 79 aa10.54□□□□□ -0.72
EXOSC3-201ENST00000327304 H7BZZ5 65 aa10.52□□□□□ -0.73
EXOSC3-201ENST00000327304 MP68P56378 58 aa10.51□□□□□ -0.73
EXOSC3-201ENST00000327304 LINC00313P59037 77 aa10.51□□□□□ -0.73
EXOSC3-201ENST00000327304 H3BPC8 53 aa10.49□□□□□ -0.73
EXOSC3-201ENST00000327304 ZCCHC13Q8WW36 166 aaKnown RBP10.49□□□□□ -0.73
EXOSC3-201ENST00000327304 H0Y9P7 68 aa10.47□□□□□ -0.73
EXOSC3-201ENST00000327304 TRAV22A0A0B4J277 110 aa10.46□□□□□ -0.74
EXOSC3-201ENST00000327304 NDUFS5O43920 106 aa10.46□□□□□ -0.74
EXOSC3-201ENST00000327304 HERC1Q15751 4861 aa10.45□□□□□ -0.74
EXOSC3-201ENST00000327304 LINC00208Q96KT6 92 aa10.42□□□□□ -0.74
EXOSC3-201ENST00000327304 PRR4Q16378 134 aa10.4□□□□□ -0.74
EXOSC3-201ENST00000327304 FP248Q71RG6 208 aaPredicted RBP10.4□□□□□ -0.74
EXOSC3-201ENST00000327304 Q8N9P0 234 aaPredicted RBP10.4□□□□□ -0.74
EXOSC3-201ENST00000327304 KRTAP16-1A8MUX0 517 aa10.4□□□□□ -0.75
EXOSC3-201ENST00000327304 FAM236DA0A1B0GTK5 79 aa10.39□□□□□ -0.75
EXOSC3-201ENST00000327304 FAM236CP0DP71 79 aa10.39□□□□□ -0.75
EXOSC3-201ENST00000327304 IGLV7-46A0A075B6I9 117 aa10.37□□□□□ -0.75
EXOSC3-201ENST00000327304 C1orf64Q8NEQ6 169 aa10.37□□□□□ -0.75
EXOSC3-201ENST00000327304 ATP5EP56381 51 aaPredicted RBP10.36□□□□□ -0.75
EXOSC3-201ENST00000327304 KRTAP13-3Q3SY46 172 aa10.31□□□□□ -0.76
EXOSC3-201ENST00000327304 C9orf92A6NGG3 77 aa10.3□□□□□ -0.76
EXOSC3-201ENST00000327304 RPS28P62857 69 aaKnown RBP10.29□□□□□ -0.76
EXOSC3-201ENST00000327304 Q5W150 140 aa10.29□□□□□ -0.76
EXOSC3-201ENST00000327304 HMCN2Q8NDA2 5059 aa10.27□□□□□ -0.76
EXOSC3-201ENST00000327304 LOC101927531A0A1B0GV80 90 aa10.26□□□□□ -0.77
EXOSC3-201ENST00000327304 LPAP08519 4548 aa10.25□□□□□ -0.77
EXOSC3-201ENST00000327304 TPRXLQ17RH7 258 aa10.23□□□□□ -0.77
EXOSC3-201ENST00000327304 SPANXA2-OT1Q8N9U9 137 aa10.23□□□□□ -0.77
EXOSC3-201ENST00000327304 SERP1Q9Y6X1 66 aa10.21□□□□□ -0.78
EXOSC3-201ENST00000327304 CYP4F30PQ9H0H9 118 aa10.19□□□□□ -0.78
EXOSC3-201ENST00000327304 C20orf166-AS1Q96NR2 134 aa10.17□□□□□ -0.78
EXOSC3-201ENST00000327304 A8MUU9 505 aa10.15□□□□□ -0.78
EXOSC3-201ENST00000327304 PCOTHQ58A44 107 aa10.15□□□□□ -0.78
EXOSC3-201ENST00000327304 XP32Q5T750 250 aa10.15□□□□□ -0.78
EXOSC3-201ENST00000327304 IGKV2-30P06310 120 aa10.13□□□□□ -0.79
EXOSC3-201ENST00000327304 LRP2P98164 4655 aa10.13□□□□□ -0.79
EXOSC3-201ENST00000327304 Q75L30 129 aa10.06□□□□□ -0.8
EXOSC3-201ENST00000327304 RPL37P61927 97 aaKnown RBP10.03□□□□□ -0.8
EXOSC3-201ENST00000327304 IGKV2D-30A0A075B6S6 120 aa10□□□□□ -0.81
EXOSC3-201ENST00000327304 HRES1P13985 223 aa9.99□□□□□ -0.81
EXOSC3-201ENST00000327304 C7orf65Q6ZTY9 151 aa9.99□□□□□ -0.81
EXOSC3-201ENST00000327304 SMIM26A0A096LP01 95 aa9.97□□□□□ -0.81
EXOSC3-201ENST00000327304 MUC17Q685J3 4493 aa9.94□□□□□ -0.82
EXOSC3-201ENST00000327304 ATP11AUNQ6ZP68 121 aa9.91□□□□□ -0.82
EXOSC3-201ENST00000327304 COA5Q86WW8 74 aa9.89□□□□□ -0.83
EXOSC3-201ENST00000327304 DMAC1Q96GE9 116 aa9.89□□□□□ -0.83
EXOSC3-201ENST00000327304 SEC61BP60468 96 aaKnown RBP9.88□□□□□ -0.83
EXOSC3-201ENST00000327304 ACYP2P14621 99 aa9.86□□□□□ -0.83
EXOSC3-201ENST00000327304 UBR4Q5T4S7 5183 aa9.83□□□□□ -0.84
EXOSC3-201ENST00000327304 SPINK7P58062 85 aa9.83□□□□□ -0.84
EXOSC3-201ENST00000327304 A8MUN3 132 aa9.76□□□□□ -0.85
EXOSC3-201ENST00000327304 KRTAP4-1Q9BYQ7 146 aa9.75□□□□□ -0.85
EXOSC3-201ENST00000327304 Q1T7F1 81 aa9.75□□□□□ -0.85
EXOSC3-201ENST00000327304 C4orf26Q17RF5 130 aa9.73□□□□□ -0.85
EXOSC3-201ENST00000327304 MPLKIPQ8TAP9 179 aa9.73□□□□□ -0.85
EXOSC3-201ENST00000327304 RNF213Q63HN8 5207 aa9.72□□□□□ -0.85
EXOSC3-201ENST00000327304 V9GYY9 64 aa9.71□□□□□ -0.85
EXOSC3-201ENST00000327304 CHKB-CPT1BH3BT56 60 aa9.68□□□□□ -0.86
EXOSC3-201ENST00000327304 MUC2Q02817 5179 aa9.65□□□□□ -0.86
EXOSC3-201ENST00000327304 COX6B2Q6YFQ2 88 aa9.63□□□□□ -0.87
EXOSC3-201ENST00000327304 KRTAP3-1Q9BYR8 98 aa9.62□□□□□ -0.87
EXOSC3-201ENST00000327304 LINC01558Q9Y6Z2 57 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms