RNA–Protein interactions for RNA: ENST00000325942.10

FRAS1-201, Transcript of Fraser extracellular matrix complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene FRAS1, Length 7,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRAS1-201ENST00000325942 Q6ZRN7 208 aaPredicted RBP5.18□□□□□ -1.58
FRAS1-201ENST00000325942 KRTAP25-1Q3LHN0 102 aa5.18□□□□□ -1.58
FRAS1-201ENST00000325942 KMT2BQ9UMN6 2715 aaPredicted RBP5.17□□□□□ -1.58
FRAS1-201ENST00000325942 DCHS1Q96JQ0 3298 aa5.17□□□□□ -1.58
FRAS1-201ENST00000325942 KRTAP4-16G5E9R7 235 aaPredicted RBP5.16□□□□□ -1.58
FRAS1-201ENST00000325942 KALRNO60229 2985 aa5.16□□□□□ -1.58
FRAS1-201ENST00000325942 FRYLO94915 3013 aa5.16□□□□□ -1.58
FRAS1-201ENST00000325942 TRANK1O15050 2925 aa5.15□□□□□ -1.58
FRAS1-201ENST00000325942 XP32Q5T750 250 aa5.15□□□□□ -1.58
FRAS1-201ENST00000325942 ZFHX4Q86UP3 3567 aa5.15□□□□□ -1.59
FRAS1-201ENST00000325942 LRBAP50851 2863 aa5.14□□□□□ -1.59
FRAS1-201ENST00000325942 KRTAP29-1A8MX34 341 aaPredicted RBP5.14□□□□□ -1.59
FRAS1-201ENST00000325942 CRCT1Q9UGL9 99 aa5.13□□□□□ -1.59
FRAS1-201ENST00000325942 NBEAL2Q6ZNJ1 2754 aa5.12□□□□□ -1.59
FRAS1-201ENST00000325942 RPS29P62273 56 aaKnown RBP5.12□□□□□ -1.59
FRAS1-201ENST00000325942 BOD1L1Q8NFC6 3051 aa5.1□□□□□ -1.59
FRAS1-201ENST00000325942 MAP1AP78559 2803 aaPredicted RBP5.1□□□□□ -1.59
FRAS1-201ENST00000325942 APCP25054 2843 aa5.09□□□□□ -1.59
FRAS1-201ENST00000325942 LAMA5O15230 3695 aa5.09□□□□□ -1.59
FRAS1-201ENST00000325942 GCN1Q92616 2671 aaKnown RBP5.09□□□□□ -1.59
FRAS1-201ENST00000325942 ZNF292O60281 2723 aa5.09□□□□□ -1.6
FRAS1-201ENST00000325942 NSD1Q96L73 2696 aaPredicted RBP5.09□□□□□ -1.6
FRAS1-201ENST00000325942 COL12A1Q99715 3063 aa5.08□□□□□ -1.6
FRAS1-201ENST00000325942 CHD9Q3L8U1 2897 aa5.08□□□□□ -1.6
FRAS1-201ENST00000325942 KRTAP21-3Q3LHN1 58 aa5.07□□□□□ -1.6
FRAS1-201ENST00000325942 IGSF10Q6WRI0 2623 aa5.07□□□□□ -1.6
FRAS1-201ENST00000325942 ZZEF1O43149 2961 aa5.07□□□□□ -1.6
FRAS1-201ENST00000325942 DSPP15924 2871 aaKnown RBP5.04□□□□□ -1.6
FRAS1-201ENST00000325942 KRTAP7-1Q8IUC3 87 aa5.03□□□□□ -1.6
FRAS1-201ENST00000325942 ADGRG4Q8IZF6 3080 aa5.03□□□□□ -1.6
FRAS1-201ENST00000325942 NBEAQ8NFP9 2946 aa5.03□□□□□ -1.6
FRAS1-201ENST00000325942 TNRC18O15417 2968 aaPredicted RBP5.02□□□□□ -1.61
FRAS1-201ENST00000325942 TPRXLQ17RH7 258 aa4.97□□□□□ -1.61
FRAS1-201ENST00000325942 TACC2O95359 2948 aa4.97□□□□□ -1.61
FRAS1-201ENST00000325942 UTP20O75691 2785 aaKnown RBP4.95□□□□□ -1.62
FRAS1-201ENST00000325942 HIVEP1P15822 2718 aa4.95□□□□□ -1.62
FRAS1-201ENST00000325942 RELNP78509 3460 aa4.94□□□□□ -1.62
FRAS1-201ENST00000325942 CSMD1Q96PZ7 3565 aa4.91□□□□□ -1.62
FRAS1-201ENST00000325942 UBR5O95071 2799 aaPredicted RBP4.9□□□□□ -1.62
FRAS1-201ENST00000325942 KRTAP13-1Q8IUC0 172 aa4.9□□□□□ -1.63
FRAS1-201ENST00000325942 ITPR1Q14643 2758 aa4.87□□□□□ -1.63
FRAS1-201ENST00000325942 PP632Q6XCG6 107 aa4.86□□□□□ -1.63
FRAS1-201ENST00000325942 SPENQ96T58 3664 aaKnown RBP4.85□□□□□ -1.63
FRAS1-201ENST00000325942 KRTAP1-4P0C5Y4 121 aa4.85□□□□□ -1.63
FRAS1-201ENST00000325942 CELSR1Q9NYQ6 3014 aa4.85□□□□□ -1.63
FRAS1-201ENST00000325942 KRTAP12-2P59991 146 aa4.84□□□□□ -1.63
FRAS1-201ENST00000325942 KRTAP13-3Q3SY46 172 aa4.84□□□□□ -1.63
FRAS1-201ENST00000325942 H0YAA0 97 aa4.82□□□□□ -1.64
FRAS1-201ENST00000325942 TENM1Q9UKZ4 2725 aa4.82□□□□□ -1.64
FRAS1-201ENST00000325942 ZFHX3Q15911 3703 aa4.82□□□□□ -1.64
FRAS1-201ENST00000325942 KRTAP15-1Q3LI76 137 aa4.79□□□□□ -1.64
FRAS1-201ENST00000325942 FLNCQ14315 2725 aa4.78□□□□□ -1.64
FRAS1-201ENST00000325942 SMG1Q96Q15 3661 aaKnown RBP4.77□□□□□ -1.65
FRAS1-201ENST00000325942 DMDP11532 3685 aa4.77□□□□□ -1.65
FRAS1-201ENST00000325942 DMXL1Q9Y485 3027 aa4.77□□□□□ -1.65
FRAS1-201ENST00000325942 CELSR2Q9HCU4 2923 aa4.75□□□□□ -1.65
FRAS1-201ENST00000325942 TENM2Q9NT68 2774 aa4.74□□□□□ -1.65
FRAS1-201ENST00000325942 CUBNO60494 3623 aa4.74□□□□□ -1.65
FRAS1-201ENST00000325942 TENM4Q6N022 2769 aa4.73□□□□□ -1.65
FRAS1-201ENST00000325942 MUC3AQ02505 3323 aa4.71□□□□□ -1.66
FRAS1-201ENST00000325942 LORP23490 312 aaPredicted RBP4.7□□□□□ -1.66
FRAS1-201ENST00000325942 ZANQ9Y493 2812 aa4.66□□□□□ -1.66
FRAS1-201ENST00000325942 VWFP04275 2813 aa4.65□□□□□ -1.67
FRAS1-201ENST00000325942 SVEP1Q4LDE5 3571 aa4.64□□□□□ -1.67
FRAS1-201ENST00000325942 PKD1L1Q8TDX9 2849 aa4.64□□□□□ -1.67
FRAS1-201ENST00000325942 DCHS2Q6V1P9 2916 aa4.63□□□□□ -1.67
FRAS1-201ENST00000325942 NF1P21359 2839 aa4.61□□□□□ -1.67
FRAS1-201ENST00000325942 CSMD2Q7Z408 3487 aa4.55□□□□□ -1.68
FRAS1-201ENST00000325942 TENM3Q9P273 2699 aa4.54□□□□□ -1.68
FRAS1-201ENST00000325942 KRTAP13-4Q3LI77 160 aa4.51□□□□□ -1.69
FRAS1-201ENST00000325942 NIPBLQ6KC79 2804 aaeCLIP4.49□□□□□ -1.69
FRAS1-201ENST00000325942 PDZD2O15018 2839 aa4.49□□□□□ -1.69
FRAS1-201ENST00000325942 KRTAP4-5Q9BYR2 181 aa4.49□□□□□ -1.69
FRAS1-201ENST00000325942 FBN2P35556 2912 aa4.48□□□□□ -1.69
FRAS1-201ENST00000325942 TGP01266 2768 aa4.48□□□□□ -1.69
FRAS1-201ENST00000325942 KRTAP10-6P60371 365 aaPredicted RBP4.47□□□□□ -1.69
FRAS1-201ENST00000325942 CSMD3Q7Z407 3707 aa4.46□□□□□ -1.7
FRAS1-201ENST00000325942 KRTAP10-12P60413 245 aa4.43□□□□□ -1.7
FRAS1-201ENST00000325942 VPS13CQ709C8 3753 aa4.42□□□□□ -1.7
FRAS1-201ENST00000325942 KRTAP12-1P59990 96 aa4.41□□□□□ -1.7
FRAS1-201ENST00000325942 MEGF8Q7Z7M0 2845 aa4.4□□□□□ -1.7
FRAS1-201ENST00000325942 KRTAP10-5P60370 271 aa4.38□□□□□ -1.71
FRAS1-201ENST00000325942 KRTAP8-1Q8IUC2 63 aa4.37□□□□□ -1.71
FRAS1-201ENST00000325942 HRNRQ86YZ3 2850 aaPredicted RBP4.35□□□□□ -1.71
FRAS1-201ENST00000325942 TRRAPQ9Y4A5 3859 aa4.35□□□□□ -1.71
FRAS1-201ENST00000325942 MXRA5Q9NR99 2828 aa4.28□□□□□ -1.72
FRAS1-201ENST00000325942 BSNQ9UPA5 3926 aa4.26□□□□□ -1.73
FRAS1-201ENST00000325942 ANK3Q12955 4377 aaKnown RBP4.25□□□□□ -1.73
FRAS1-201ENST00000325942 COL7A1Q02388 2944 aa4.25□□□□□ -1.73
FRAS1-201ENST00000325942 AKAP9Q99996 3911 aa4.23□□□□□ -1.73
FRAS1-201ENST00000325942 HUWE1Q7Z6Z7 4374 aaKnown RBP4.21□□□□□ -1.74
FRAS1-201ENST00000325942 LCE3AQ5TA76 89 aa4.2□□□□□ -1.74
FRAS1-201ENST00000325942 KRTAP3-1Q9BYR8 98 aa4.2□□□□□ -1.74
FRAS1-201ENST00000325942 SRRM2Q9UQ35 2752 aaKnown RBP4.18□□□□□ -1.74
FRAS1-201ENST00000325942 KRTAP12-3P60328 96 aa4.18□□□□□ -1.74
FRAS1-201ENST00000325942 MT1HL1P0DM35 61 aa4.16□□□□□ -1.74
FRAS1-201ENST00000325942 SPRR2FQ96RM1 72 aa4.15□□□□□ -1.74
FRAS1-201ENST00000325942 ALMS1Q8TCU4 4167 aa4.15□□□□□ -1.75
FRAS1-201ENST00000325942 INE1O15225 51 aa4.11□□□□□ -1.75
FRAS1-201ENST00000325942 FBN1P35555 2871 aaKnown RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms