RNA–Protein interactions for RNA: ENST00000325083.12

PCM1-201, Transcript of pericentriolar material 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCM1, Length 6,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-201ENST00000325083 NOTCH1P46531 2555 aa7.07□□□□□ -1.28
PCM1-201ENST00000325083 CFAP47Q6ZTR5 3102 aa7.06□□□□□ -1.28
PCM1-201ENST00000325083 HTTP42858 3142 aa7.05□□□□□ -1.28
PCM1-201ENST00000325083 KRTAP21-3Q3LHN1 58 aa7.04□□□□□ -1.28
PCM1-201ENST00000325083 LRBAP50851 2863 aa7.02□□□□□ -1.29
PCM1-201ENST00000325083 SPEGQ15772 3267 aa7.01□□□□□ -1.29
PCM1-201ENST00000325083 CHD9Q3L8U1 2897 aa7□□□□□ -1.29
PCM1-201ENST00000325083 SETXQ7Z333 2677 aaKnown RBP6.95□□□□□ -1.3
PCM1-201ENST00000325083 KRTAP15-1Q3LI76 137 aa6.95□□□□□ -1.3
PCM1-201ENST00000325083 KRTAP13-4Q3LI77 160 aa6.94□□□□□ -1.3
PCM1-201ENST00000325083 VCANP13611 3396 aa6.93□□□□□ -1.3
PCM1-201ENST00000325083 ZNF292O60281 2723 aa6.92□□□□□ -1.3
PCM1-201ENST00000325083 NSD1Q96L73 2696 aaPredicted RBP6.89□□□□□ -1.31
PCM1-201ENST00000325083 LAMA1P25391 3075 aa6.89□□□□□ -1.31
PCM1-201ENST00000325083 TRANK1O15050 2925 aa6.87□□□□□ -1.31
PCM1-201ENST00000325083 USP34Q70CQ2 3546 aa6.87□□□□□ -1.31
PCM1-201ENST00000325083 DSPP15924 2871 aaKnown RBP6.85□□□□□ -1.31
PCM1-201ENST00000325083 BAHCC1Q9P281 2608 aa6.85□□□□□ -1.31
PCM1-201ENST00000325083 UBR5O95071 2799 aaPredicted RBP6.85□□□□□ -1.31
PCM1-201ENST00000325083 KRTAP12-1P59990 96 aa6.85□□□□□ -1.31
PCM1-201ENST00000325083 ASH1LQ9NR48 2969 aaKnown RBP6.84□□□□□ -1.31
PCM1-201ENST00000325083 IGSF10Q6WRI0 2623 aa6.81□□□□□ -1.32
PCM1-201ENST00000325083 CRCT1Q9UGL9 99 aa6.81□□□□□ -1.32
PCM1-201ENST00000325083 SPTBN5Q9NRC6 3674 aaKnown RBP6.8□□□□□ -1.32
PCM1-201ENST00000325083 DMXL2Q8TDJ6 3036 aa6.8□□□□□ -1.32
PCM1-201ENST00000325083 DCHS1Q96JQ0 3298 aa6.78□□□□□ -1.32
PCM1-201ENST00000325083 UTP20O75691 2785 aaKnown RBP6.78□□□□□ -1.32
PCM1-201ENST00000325083 HIVEP1P15822 2718 aa6.76□□□□□ -1.33
PCM1-201ENST00000325083 ZZEF1O43149 2961 aa6.75□□□□□ -1.33
PCM1-201ENST00000325083 COL12A1Q99715 3063 aa6.73□□□□□ -1.33
PCM1-201ENST00000325083 ASPMQ8IZT6 3477 aa6.72□□□□□ -1.33
PCM1-201ENST00000325083 ITPR1Q14643 2758 aa6.72□□□□□ -1.33
PCM1-201ENST00000325083 ATMQ13315 3056 aa6.71□□□□□ -1.33
PCM1-201ENST00000325083 BOD1L1Q8NFC6 3051 aa6.71□□□□□ -1.34
PCM1-201ENST00000325083 MAP1AP78559 2803 aaPredicted RBP6.7□□□□□ -1.34
PCM1-201ENST00000325083 FRYLO94915 3013 aa6.66□□□□□ -1.34
PCM1-201ENST00000325083 LOC400499M0QZD8 3231 aa6.64□□□□□ -1.35
PCM1-201ENST00000325083 ADGRG4Q8IZF6 3080 aa6.6□□□□□ -1.35
PCM1-201ENST00000325083 NBPF19A0A087WUL8 3843 aa6.59□□□□□ -1.35
PCM1-201ENST00000325083 TACC2O95359 2948 aa6.59□□□□□ -1.35
PCM1-201ENST00000325083 KRTAP3-1Q9BYR8 98 aa6.58□□□□□ -1.36
PCM1-201ENST00000325083 WDFY3Q8IZQ1 3526 aa6.55□□□□□ -1.36
PCM1-201ENST00000325083 MYO15AQ9UKN7 3530 aa6.53□□□□□ -1.36
PCM1-201ENST00000325083 TNRC18O15417 2968 aaPredicted RBP6.53□□□□□ -1.36
PCM1-201ENST00000325083 ZFHX4Q86UP3 3567 aa6.51□□□□□ -1.37
PCM1-201ENST00000325083 TGP01266 2768 aa6.51□□□□□ -1.37
PCM1-201ENST00000325083 CSMD1Q96PZ7 3565 aa6.49□□□□□ -1.37
PCM1-201ENST00000325083 INE1O15225 51 aa6.49□□□□□ -1.37
PCM1-201ENST00000325083 NBEAQ8NFP9 2946 aa6.47□□□□□ -1.37
PCM1-201ENST00000325083 CELSR1Q9NYQ6 3014 aa6.46□□□□□ -1.38
PCM1-201ENST00000325083 CELSR2Q9HCU4 2923 aa6.45□□□□□ -1.38
PCM1-201ENST00000325083 EYSQ5T1H1 3165 aa6.44□□□□□ -1.38
PCM1-201ENST00000325083 KRTAP10-12P60413 245 aa6.44□□□□□ -1.38
PCM1-201ENST00000325083 LAMA5O15230 3695 aa6.41□□□□□ -1.38
PCM1-201ENST00000325083 KRTAP10-6P60371 365 aaPredicted RBP6.4□□□□□ -1.38
PCM1-201ENST00000325083 DMXL1Q9Y485 3027 aa6.39□□□□□ -1.39
PCM1-201ENST00000325083 TENM1Q9UKZ4 2725 aa6.37□□□□□ -1.39
PCM1-201ENST00000325083 DCHS2Q6V1P9 2916 aa6.33□□□□□ -1.4
PCM1-201ENST00000325083 TENM2Q9NT68 2774 aa6.33□□□□□ -1.4
PCM1-201ENST00000325083 TENM4Q6N022 2769 aa6.27□□□□□ -1.41
PCM1-201ENST00000325083 TENM3Q9P273 2699 aa6.23□□□□□ -1.41
PCM1-201ENST00000325083 HRNRQ86YZ3 2850 aaPredicted RBP6.22□□□□□ -1.41
PCM1-201ENST00000325083 FLNCQ14315 2725 aa6.21□□□□□ -1.41
PCM1-201ENST00000325083 LCE3AQ5TA76 89 aa6.21□□□□□ -1.42
PCM1-201ENST00000325083 KRTAP12-3P60328 96 aa6.2□□□□□ -1.42
PCM1-201ENST00000325083 RELNP78509 3460 aa6.18□□□□□ -1.42
PCM1-201ENST00000325083 KRTAP10-5P60370 271 aa6.18□□□□□ -1.42
PCM1-201ENST00000325083 NF1P21359 2839 aa6.18□□□□□ -1.42
PCM1-201ENST00000325083 FBN2P35556 2912 aa6.17□□□□□ -1.42
PCM1-201ENST00000325083 SPENQ96T58 3664 aaKnown RBP6.17□□□□□ -1.42
PCM1-201ENST00000325083 ZANQ9Y493 2812 aa6.13□□□□□ -1.43
PCM1-201ENST00000325083 KRTAP3-3Q9BYR6 98 aa6.13□□□□□ -1.43
PCM1-201ENST00000325083 KRTAP3-2Q9BYR7 98 aa6.11□□□□□ -1.43
PCM1-201ENST00000325083 SMG1Q96Q15 3661 aaKnown RBP6.11□□□□□ -1.43
PCM1-201ENST00000325083 NIPBLQ6KC79 2804 aaeCLIP6.06□□□□□ -1.441e-6■■■□□ 14.6
PCM1-201ENST00000325083 MT1HL1P0DM35 61 aa6.05□□□□□ -1.44
PCM1-201ENST00000325083 ANK3Q12955 4377 aaKnown RBP6.04□□□□□ -1.44
PCM1-201ENST00000325083 PDZD2O15018 2839 aa6.03□□□□□ -1.44
PCM1-201ENST00000325083 MXRA5Q9NR99 2828 aa6.02□□□□□ -1.45
PCM1-201ENST00000325083 DMDP11532 3685 aa6.01□□□□□ -1.45
PCM1-201ENST00000325083 KRTAP4-5Q9BYR2 181 aa6□□□□□ -1.45
PCM1-201ENST00000325083 KRTAP8-1Q8IUC2 63 aa5.99□□□□□ -1.45
PCM1-201ENST00000325083 HUWE1Q7Z6Z7 4374 aaKnown RBP5.97□□□□□ -1.45
PCM1-201ENST00000325083 VWFP04275 2813 aa5.96□□□□□ -1.45
PCM1-201ENST00000325083 MUC3AQ02505 3323 aa5.95□□□□□ -1.46
PCM1-201ENST00000325083 SVEP1Q4LDE5 3571 aa5.95□□□□□ -1.46
PCM1-201ENST00000325083 ALMS1Q8TCU4 4167 aa5.94□□□□□ -1.46
PCM1-201ENST00000325083 LORP23490 312 aaPredicted RBP5.93□□□□□ -1.46
PCM1-201ENST00000325083 PKD1L1Q8TDX9 2849 aa5.9□□□□□ -1.46
PCM1-201ENST00000325083 KRTAP23-1A1A580 65 aa5.86□□□□□ -1.47
PCM1-201ENST00000325083 ZFHX3Q15911 3703 aa5.85□□□□□ -1.47
PCM1-201ENST00000325083 AKAP9Q99996 3911 aa5.84□□□□□ -1.47
PCM1-201ENST00000325083 VPS13CQ709C8 3753 aa5.82□□□□□ -1.48
PCM1-201ENST00000325083 MEGF8Q7Z7M0 2845 aa5.8□□□□□ -1.48
PCM1-201ENST00000325083 CUBNO60494 3623 aa5.78□□□□□ -1.48
PCM1-201ENST00000325083 TRRAPQ9Y4A5 3859 aa5.76□□□□□ -1.49
PCM1-201ENST00000325083 CSMD3Q7Z407 3707 aa5.73□□□□□ -1.49
PCM1-201ENST00000325083 CSMD2Q7Z408 3487 aa5.73□□□□□ -1.49
PCM1-201ENST00000325083 BSNQ9UPA5 3926 aa5.71□□□□□ -1.5
PCM1-201ENST00000325083 KRTAP10-4P60372 401 aaPredicted RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms