RNA–Protein interactions for RNA: ENST00000323022.9

CACNA1F-201, Transcript of calcium voltage-gated channel subunit alpha1 F, humanhuman

TSL 1 (best) BASIC

Gene CACNA1F, Length 6,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1F-201ENST00000323022 KRTAP10-10P60014 251 aa6.9□□□□□ -1.3
CACNA1F-201ENST00000323022 KRTAP4-16G5E9R7 235 aaPredicted RBP6.9□□□□□ -1.31
CACNA1F-201ENST00000323022 UTP20O75691 2785 aaKnown RBP6.9□□□□□ -1.31
CACNA1F-201ENST00000323022 KRTAP29-1A8MX34 341 aaPredicted RBP6.89□□□□□ -1.31
CACNA1F-201ENST00000323022 NOTCH2NLQ7Z3S9 236 aa6.89□□□□□ -1.31
CACNA1F-201ENST00000323022 ADGRG4Q8IZF6 3080 aa6.89□□□□□ -1.31
CACNA1F-201ENST00000323022 KRTAP10-8P60410 259 aa6.89□□□□□ -1.31
CACNA1F-201ENST00000323022 KRTAP16-1A8MUX0 517 aa6.88□□□□□ -1.31
CACNA1F-201ENST00000323022 USP34Q70CQ2 3546 aa6.87□□□□□ -1.31
CACNA1F-201ENST00000323022 KALRNO60229 2985 aa6.87□□□□□ -1.31
CACNA1F-201ENST00000323022 TACC2O95359 2948 aa6.86□□□□□ -1.31
CACNA1F-201ENST00000323022 DMXL1Q9Y485 3027 aa6.85□□□□□ -1.31
CACNA1F-201ENST00000323022 KRTAP25-1Q3LHN0 102 aa6.85□□□□□ -1.31
CACNA1F-201ENST00000323022 FREM2Q5SZK8 3169 aa6.84□□□□□ -1.31
CACNA1F-201ENST00000323022 HIVEP1P15822 2718 aa6.84□□□□□ -1.31
CACNA1F-201ENST00000323022 KMT2BQ9UMN6 2715 aaPredicted RBP6.84□□□□□ -1.31
CACNA1F-201ENST00000323022 TENM4Q6N022 2769 aa6.82□□□□□ -1.32
CACNA1F-201ENST00000323022 TNP1P09430 55 aa6.81□□□□□ -1.32
CACNA1F-201ENST00000323022 NSD1Q96L73 2696 aaPredicted RBP6.8□□□□□ -1.32
CACNA1F-201ENST00000323022 APCP25054 2843 aa6.79□□□□□ -1.32
CACNA1F-201ENST00000323022 SPEGQ15772 3267 aa6.79□□□□□ -1.32
CACNA1F-201ENST00000323022 NBEAQ8NFP9 2946 aa6.77□□□□□ -1.33
CACNA1F-201ENST00000323022 KRTAP7-1Q8IUC3 87 aa6.77□□□□□ -1.33
CACNA1F-201ENST00000323022 CFAP47Q6ZTR5 3102 aa6.75□□□□□ -1.33
CACNA1F-201ENST00000323022 C10orf95Q9H7T3 257 aa6.74□□□□□ -1.33
CACNA1F-201ENST00000323022 NDUFAF8A1L188 74 aa6.74□□□□□ -1.33
CACNA1F-201ENST00000323022 XP32Q5T750 250 aa6.73□□□□□ -1.33
CACNA1F-201ENST00000323022 ZZEF1O43149 2961 aa6.72□□□□□ -1.33
CACNA1F-201ENST00000323022 KRTAP13-1Q8IUC0 172 aa6.66□□□□□ -1.34
CACNA1F-201ENST00000323022 PRO2289Q9P1D8 64 aa6.66□□□□□ -1.34
CACNA1F-201ENST00000323022 LOC400499M0QZD8 3231 aa6.65□□□□□ -1.34
CACNA1F-201ENST00000323022 TPRXLQ17RH7 258 aa6.64□□□□□ -1.35
CACNA1F-201ENST00000323022 HRNRQ86YZ3 2850 aaPredicted RBP6.62□□□□□ -1.35
CACNA1F-201ENST00000323022 MYO15AQ9UKN7 3530 aa6.62□□□□□ -1.35
CACNA1F-201ENST00000323022 ZANQ9Y493 2812 aa6.57□□□□□ -1.36
CACNA1F-201ENST00000323022 ASH1LQ9NR48 2969 aaKnown RBP6.54□□□□□ -1.36
CACNA1F-201ENST00000323022 CELSR2Q9HCU4 2923 aa6.53□□□□□ -1.36
CACNA1F-201ENST00000323022 KRTAP1-4P0C5Y4 121 aa6.53□□□□□ -1.36
CACNA1F-201ENST00000323022 NIPBLQ6KC79 2804 aaeCLIP6.53□□□□□ -1.36
CACNA1F-201ENST00000323022 PP632Q6XCG6 107 aa6.52□□□□□ -1.37
CACNA1F-201ENST00000323022 DCHS2Q6V1P9 2916 aa6.49□□□□□ -1.37
CACNA1F-201ENST00000323022 TENM2Q9NT68 2774 aa6.46□□□□□ -1.38
CACNA1F-201ENST00000323022 RELNP78509 3460 aa6.44□□□□□ -1.38
CACNA1F-201ENST00000323022 KRTAP13-3Q3SY46 172 aa6.44□□□□□ -1.38
CACNA1F-201ENST00000323022 ASPMQ8IZT6 3477 aa6.4□□□□□ -1.38
CACNA1F-201ENST00000323022 FBN2P35556 2912 aa6.4□□□□□ -1.39
CACNA1F-201ENST00000323022 NF1P21359 2839 aa6.37□□□□□ -1.39
CACNA1F-201ENST00000323022 TENM1Q9UKZ4 2725 aa6.35□□□□□ -1.39
CACNA1F-201ENST00000323022 WDFY3Q8IZQ1 3526 aa6.35□□□□□ -1.39
CACNA1F-201ENST00000323022 P0C880 135 aa6.34□□□□□ -1.39
CACNA1F-201ENST00000323022 LAMA5O15230 3695 aa6.34□□□□□ -1.4
CACNA1F-201ENST00000323022 H0YAA0 97 aa6.31□□□□□ -1.4
CACNA1F-201ENST00000323022 DMDP11532 3685 aa6.31□□□□□ -1.4
CACNA1F-201ENST00000323022 NBPF19A0A087WUL8 3843 aa6.3□□□□□ -1.4
CACNA1F-201ENST00000323022 PDZD2O15018 2839 aa6.28□□□□□ -1.4
CACNA1F-201ENST00000323022 CELSR1Q9NYQ6 3014 aa6.27□□□□□ -1.41
CACNA1F-201ENST00000323022 DCHS1Q96JQ0 3298 aa6.27□□□□□ -1.41
CACNA1F-201ENST00000323022 ZFHX4Q86UP3 3567 aa6.26□□□□□ -1.41
CACNA1F-201ENST00000323022 MXRA5Q9NR99 2828 aa6.25□□□□□ -1.41
CACNA1F-201ENST00000323022 TENM3Q9P273 2699 aa6.22□□□□□ -1.41
CACNA1F-201ENST00000323022 MUC3AQ02505 3323 aa6.21□□□□□ -1.42
CACNA1F-201ENST00000323022 PKD1L1Q8TDX9 2849 aa6.17□□□□□ -1.42
CACNA1F-201ENST00000323022 OTOGQ6ZRI0 2925 aa6.11□□□□□ -1.43
CACNA1F-201ENST00000323022 ANK3Q12955 4377 aaKnown RBP6.11□□□□□ -1.43
CACNA1F-201ENST00000323022 VWFP04275 2813 aa6.05□□□□□ -1.44
CACNA1F-201ENST00000323022 CSMD1Q96PZ7 3565 aa6.04□□□□□ -1.44
CACNA1F-201ENST00000323022 SMG1Q96Q15 3661 aaKnown RBP6.04□□□□□ -1.44
CACNA1F-201ENST00000323022 CRCT1Q9UGL9 99 aa6.04□□□□□ -1.44
CACNA1F-201ENST00000323022 ZFHX3Q15911 3703 aa6.02□□□□□ -1.45
CACNA1F-201ENST00000323022 KRTAP4-5Q9BYR2 181 aa6□□□□□ -1.45
CACNA1F-201ENST00000323022 FBN1P35555 2871 aaKnown RBP5.97□□□□□ -1.45
CACNA1F-201ENST00000323022 KRTAP12-2P59991 146 aa5.96□□□□□ -1.46
CACNA1F-201ENST00000323022 SPENQ96T58 3664 aaKnown RBP5.94□□□□□ -1.46
CACNA1F-201ENST00000323022 BSNQ9UPA5 3926 aa5.93□□□□□ -1.46
CACNA1F-201ENST00000323022 CSMD2Q7Z408 3487 aa5.92□□□□□ -1.46
CACNA1F-201ENST00000323022 KRTAP13-4Q3LI77 160 aa5.9□□□□□ -1.47
CACNA1F-201ENST00000323022 TGP01266 2768 aa5.9□□□□□ -1.47
CACNA1F-201ENST00000323022 SVEP1Q4LDE5 3571 aa5.89□□□□□ -1.47
CACNA1F-201ENST00000323022 KRTAP15-1Q3LI76 137 aa5.86□□□□□ -1.47
CACNA1F-201ENST00000323022 LORP23490 312 aaPredicted RBP5.81□□□□□ -1.48
CACNA1F-201ENST00000323022 TRRAPQ9Y4A5 3859 aa5.8□□□□□ -1.48
CACNA1F-201ENST00000323022 FBN3Q75N90 2809 aa5.79□□□□□ -1.48
CACNA1F-201ENST00000323022 MT1HL1P0DM35 61 aa5.78□□□□□ -1.48
CACNA1F-201ENST00000323022 KRTAP12-1P59990 96 aa5.74□□□□□ -1.49
CACNA1F-201ENST00000323022 SRRM2Q9UQ35 2752 aaKnown RBP5.72□□□□□ -1.49
CACNA1F-201ENST00000323022 HUWE1Q7Z6Z7 4374 aaKnown RBP5.72□□□□□ -1.49
CACNA1F-201ENST00000323022 CUBNO60494 3623 aa5.63□□□□□ -1.51
CACNA1F-201ENST00000323022 KRTAP3-1Q9BYR8 98 aa5.62□□□□□ -1.51
CACNA1F-201ENST00000323022 KRTAP10-12P60413 245 aa5.6□□□□□ -1.51
CACNA1F-201ENST00000323022 ALMS1Q8TCU4 4167 aa5.58□□□□□ -1.52
CACNA1F-201ENST00000323022 VPS13CQ709C8 3753 aa5.57□□□□□ -1.52
CACNA1F-201ENST00000323022 KRTAP10-4P60372 401 aaPredicted RBP5.55□□□□□ -1.52
CACNA1F-201ENST00000323022 KRTAP8-1Q8IUC2 63 aa5.55□□□□□ -1.52
CACNA1F-201ENST00000323022 MEGF8Q7Z7M0 2845 aa5.53□□□□□ -1.52
CACNA1F-201ENST00000323022 AKAP9Q99996 3911 aa5.52□□□□□ -1.53
CACNA1F-201ENST00000323022 KRTAP10-6P60371 365 aaPredicted RBP5.5□□□□□ -1.53
CACNA1F-201ENST00000323022 ZNF469Q96JG9 3925 aaPredicted RBP5.46□□□□□ -1.53
CACNA1F-201ENST00000323022 COL7A1Q02388 2944 aa5.46□□□□□ -1.53
CACNA1F-201ENST00000323022 DNAH9Q9NYC9 4486 aa5.46□□□□□ -1.54
CACNA1F-201ENST00000323022 INE1O15225 51 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms