RNA–Protein interactions for RNA: ENST00000315251.10

CHDH-201, Transcript of choline dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHDH, Length 7,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHDH-201ENST00000315251 COL12A1Q99715 3063 aa8.36□□□□□ -1.07
CHDH-201ENST00000315251 VCANP13611 3396 aa8.35□□□□□ -1.07
CHDH-201ENST00000315251 CHD9Q3L8U1 2897 aa8.35□□□□□ -1.07
CHDH-201ENST00000315251 COL6A3P12111 3177 aa8.34□□□□□ -1.07
CHDH-201ENST00000315251 FRYLO94915 3013 aa8.34□□□□□ -1.07
CHDH-201ENST00000315251 LAMA1P25391 3075 aa8.33□□□□□ -1.08
CHDH-201ENST00000315251 HIVEP1P15822 2718 aa8.33□□□□□ -1.08
CHDH-201ENST00000315251 KRTAP10-8P60410 259 aa8.32□□□□□ -1.08
CHDH-201ENST00000315251 SPEGQ15772 3267 aa8.31□□□□□ -1.08
CHDH-201ENST00000315251 TACC2O95359 2948 aa8.31□□□□□ -1.08
CHDH-201ENST00000315251 Q6ZRN7 208 aaPredicted RBP8.3□□□□□ -1.08
CHDH-201ENST00000315251 KRTAP7-1Q8IUC3 87 aa8.29□□□□□ -1.08
CHDH-201ENST00000315251 A0A1B0GVY2 172 aa8.26□□□□□ -1.09
CHDH-201ENST00000315251 BOD1L1Q8NFC6 3051 aa8.26□□□□□ -1.09
CHDH-201ENST00000315251 SZT2Q5T011 3432 aa8.24□□□□□ -1.09
CHDH-201ENST00000315251 KRTAP13-1Q8IUC0 172 aa8.18□□□□□ -1.1
CHDH-201ENST00000315251 CELSR2Q9HCU4 2923 aa8.16□□□□□ -1.1
CHDH-201ENST00000315251 ATMQ13315 3056 aa8.15□□□□□ -1.11
CHDH-201ENST00000315251 NBEAQ8NFP9 2946 aa8.14□□□□□ -1.11
CHDH-201ENST00000315251 ADGRG4Q8IZF6 3080 aa8.1□□□□□ -1.11
CHDH-201ENST00000315251 PP632Q6XCG6 107 aa8.09□□□□□ -1.11
CHDH-201ENST00000315251 ZZEF1O43149 2961 aa8.08□□□□□ -1.12
CHDH-201ENST00000315251 USP34Q70CQ2 3546 aa8.07□□□□□ -1.12
CHDH-201ENST00000315251 FLNCQ14315 2725 aa8.06□□□□□ -1.12
CHDH-201ENST00000315251 TENM1Q9UKZ4 2725 aa8.02□□□□□ -1.13
CHDH-201ENST00000315251 KRTAP10-10P60014 251 aa8.01□□□□□ -1.13
CHDH-201ENST00000315251 XP32Q5T750 250 aa8□□□□□ -1.13
CHDH-201ENST00000315251 H0YAA0 97 aa7.98□□□□□ -1.13
CHDH-201ENST00000315251 P0C880 135 aa7.96□□□□□ -1.14
CHDH-201ENST00000315251 DCHS2Q6V1P9 2916 aa7.95□□□□□ -1.14
CHDH-201ENST00000315251 NF1P21359 2839 aa7.95□□□□□ -1.14
CHDH-201ENST00000315251 TENM4Q6N022 2769 aa7.94□□□□□ -1.14
CHDH-201ENST00000315251 PRO2289Q9P1D8 64 aa7.91□□□□□ -1.14
CHDH-201ENST00000315251 DMXL1Q9Y485 3027 aa7.9□□□□□ -1.14
CHDH-201ENST00000315251 EYSQ5T1H1 3165 aa7.9□□□□□ -1.15
CHDH-201ENST00000315251 TNRC18O15417 2968 aaPredicted RBP7.85□□□□□ -1.15
CHDH-201ENST00000315251 CELSR1Q9NYQ6 3014 aa7.84□□□□□ -1.15
CHDH-201ENST00000315251 KRTAP1-4P0C5Y4 121 aa7.82□□□□□ -1.16
CHDH-201ENST00000315251 TENM3Q9P273 2699 aa7.81□□□□□ -1.16
CHDH-201ENST00000315251 NIPBLQ6KC79 2804 aaeCLIP7.81□□□□□ -1.16
CHDH-201ENST00000315251 TGP01266 2768 aa7.8□□□□□ -1.16
CHDH-201ENST00000315251 TPRXLQ17RH7 258 aa7.76□□□□□ -1.17
CHDH-201ENST00000315251 SPTBN5Q9NRC6 3674 aaKnown RBP7.74□□□□□ -1.17
CHDH-201ENST00000315251 ASPMQ8IZT6 3477 aa7.73□□□□□ -1.17
CHDH-201ENST00000315251 MYO15AQ9UKN7 3530 aa7.72□□□□□ -1.17
CHDH-201ENST00000315251 FBN2P35556 2912 aa7.71□□□□□ -1.18
CHDH-201ENST00000315251 LOC400499M0QZD8 3231 aa7.71□□□□□ -1.18
CHDH-201ENST00000315251 WDFY3Q8IZQ1 3526 aa7.7□□□□□ -1.18
CHDH-201ENST00000315251 PDZD2O15018 2839 aa7.7□□□□□ -1.18
CHDH-201ENST00000315251 ZANQ9Y493 2812 aa7.67□□□□□ -1.18
CHDH-201ENST00000315251 ZFHX4Q86UP3 3567 aa7.67□□□□□ -1.18
CHDH-201ENST00000315251 PKD1L1Q8TDX9 2849 aa7.66□□□□□ -1.18
CHDH-201ENST00000315251 VWFP04275 2813 aa7.64□□□□□ -1.19
CHDH-201ENST00000315251 KRTAP21-3Q3LHN1 58 aa7.62□□□□□ -1.19
CHDH-201ENST00000315251 KRTAP13-3Q3SY46 172 aa7.61□□□□□ -1.19
CHDH-201ENST00000315251 TENM2Q9NT68 2774 aa7.56□□□□□ -1.2
CHDH-201ENST00000315251 KRTAP12-2P59991 146 aa7.55□□□□□ -1.2
CHDH-201ENST00000315251 DCHS1Q96JQ0 3298 aa7.54□□□□□ -1.2
CHDH-201ENST00000315251 NBPF19A0A087WUL8 3843 aa7.54□□□□□ -1.2
CHDH-201ENST00000315251 HRNRQ86YZ3 2850 aaPredicted RBP7.42□□□□□ -1.22
CHDH-201ENST00000315251 LAMA5O15230 3695 aa7.42□□□□□ -1.22
CHDH-201ENST00000315251 KRTAP13-4Q3LI77 160 aa7.39□□□□□ -1.23
CHDH-201ENST00000315251 MXRA5Q9NR99 2828 aa7.38□□□□□ -1.23
CHDH-201ENST00000315251 CSMD1Q96PZ7 3565 aa7.37□□□□□ -1.23
CHDH-201ENST00000315251 KRTAP15-1Q3LI76 137 aa7.34□□□□□ -1.23
CHDH-201ENST00000315251 RELNP78509 3460 aa7.34□□□□□ -1.23
CHDH-201ENST00000315251 KRTAP12-1P59990 96 aa7.31□□□□□ -1.24
CHDH-201ENST00000315251 SRRM2Q9UQ35 2752 aaKnown RBP7.27□□□□□ -1.25
CHDH-201ENST00000315251 ZFHX3Q15911 3703 aa7.22□□□□□ -1.25
CHDH-201ENST00000315251 CRCT1Q9UGL9 99 aa7.17□□□□□ -1.26
CHDH-201ENST00000315251 SMG1Q96Q15 3661 aaKnown RBP7.16□□□□□ -1.26
CHDH-201ENST00000315251 COL7A1Q02388 2944 aa7.15□□□□□ -1.26
CHDH-201ENST00000315251 CUBNO60494 3623 aa7.13□□□□□ -1.27
CHDH-201ENST00000315251 MEGF8Q7Z7M0 2845 aa7.07□□□□□ -1.28
CHDH-201ENST00000315251 SPENQ96T58 3664 aaKnown RBP7.06□□□□□ -1.28
CHDH-201ENST00000315251 KRTAP3-1Q9BYR8 98 aa7.05□□□□□ -1.28
CHDH-201ENST00000315251 FBN3Q75N90 2809 aa6.99□□□□□ -1.29
CHDH-201ENST00000315251 FBN1P35555 2871 aaKnown RBP6.98□□□□□ -1.29
CHDH-201ENST00000315251 SVEP1Q4LDE5 3571 aa6.95□□□□□ -1.3
CHDH-201ENST00000315251 DMDP11532 3685 aa6.94□□□□□ -1.3
CHDH-201ENST00000315251 KRTAP10-6P60371 365 aaPredicted RBP6.89□□□□□ -1.31
CHDH-201ENST00000315251 INE1O15225 51 aa6.86□□□□□ -1.31
CHDH-201ENST00000315251 KRTAP10-12P60413 245 aa6.86□□□□□ -1.31
CHDH-201ENST00000315251 MUC3AQ02505 3323 aa6.78□□□□□ -1.32
CHDH-201ENST00000315251 TRRAPQ9Y4A5 3859 aa6.77□□□□□ -1.33
CHDH-201ENST00000315251 CSMD2Q7Z408 3487 aa6.75□□□□□ -1.33
CHDH-201ENST00000315251 OTOGQ6ZRI0 2925 aa6.69□□□□□ -1.34
CHDH-201ENST00000315251 CSMD3Q7Z407 3707 aa6.66□□□□□ -1.34
CHDH-201ENST00000315251 KRTAP12-3P60328 96 aa6.63□□□□□ -1.35
CHDH-201ENST00000315251 VPS13CQ709C8 3753 aa6.59□□□□□ -1.35
CHDH-201ENST00000315251 KRTAP3-3Q9BYR6 98 aa6.57□□□□□ -1.36
CHDH-201ENST00000315251 KRTAP3-2Q9BYR7 98 aa6.56□□□□□ -1.36
CHDH-201ENST00000315251 LCE3AQ5TA76 89 aa6.56□□□□□ -1.36
CHDH-201ENST00000315251 KRTAP10-5P60370 271 aa6.55□□□□□ -1.36
CHDH-201ENST00000315251 MT1HL1P0DM35 61 aa6.53□□□□□ -1.36
CHDH-201ENST00000315251 LORP23490 312 aaPredicted RBP6.48□□□□□ -1.37
CHDH-201ENST00000315251 KRTAP4-5Q9BYR2 181 aa6.44□□□□□ -1.38
CHDH-201ENST00000315251 ANK3Q12955 4377 aaKnown RBP6.4□□□□□ -1.39
CHDH-201ENST00000315251 KRTAP8-1Q8IUC2 63 aa6.36□□□□□ -1.39
CHDH-201ENST00000315251 BSNQ9UPA5 3926 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms