RNA–Protein interactions for RNA: ENST00000309033.4

UBXN2A-201, Transcript of UBX domain protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN2A, Length 6,066 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2A-201ENST00000309033 A8MUU9 505 aa10.35□□□□□ -0.75
UBXN2A-201ENST00000309033 CFAP47Q6ZTR5 3102 aa10.35□□□□□ -0.75
UBXN2A-201ENST00000309033 UTP20O75691 2785 aaKnown RBP10.35□□□□□ -0.75
UBXN2A-201ENST00000309033 SPTBN5Q9NRC6 3674 aaKnown RBP10.34□□□□□ -0.75
UBXN2A-201ENST00000309033 FLNCQ14315 2725 aa10.32□□□□□ -0.76
UBXN2A-201ENST00000309033 ASH1LQ9NR48 2969 aaKnown RBP10.31□□□□□ -0.76
UBXN2A-201ENST00000309033 A6NN06 94 aa10.3□□□□□ -0.76
UBXN2A-201ENST00000309033 HIVEP1P15822 2718 aa10.27□□□□□ -0.77
UBXN2A-201ENST00000309033 APCP25054 2843 aa10.26□□□□□ -0.77
UBXN2A-201ENST00000309033 KRTAP25-1Q3LHN0 102 aa10.24□□□□□ -0.77
UBXN2A-201ENST00000309033 REV3LO60673 3130 aa10.24□□□□□ -0.77
UBXN2A-201ENST00000309033 CRYBG3Q68DQ2 2970 aa10.21□□□□□ -0.78
UBXN2A-201ENST00000309033 C20orf166-AS1Q96NR2 134 aa10.2□□□□□ -0.78
UBXN2A-201ENST00000309033 SPEGQ15772 3267 aa10.19□□□□□ -0.78
UBXN2A-201ENST00000309033 EYSQ5T1H1 3165 aa10.17□□□□□ -0.78
UBXN2A-201ENST00000309033 USP34Q70CQ2 3546 aa10.16□□□□□ -0.78
UBXN2A-201ENST00000309033 ZZEF1O43149 2961 aa10.14□□□□□ -0.79
UBXN2A-201ENST00000309033 KMT2BQ9UMN6 2715 aaPredicted RBP10.14□□□□□ -0.79
UBXN2A-201ENST00000309033 CELSR2Q9HCU4 2923 aa10.05□□□□□ -0.8
UBXN2A-201ENST00000309033 KRTAP1-4P0C5Y4 121 aa10.01□□□□□ -0.81
UBXN2A-201ENST00000309033 TNRC18O15417 2968 aaPredicted RBP9.98□□□□□ -0.81
UBXN2A-201ENST00000309033 DMXL1Q9Y485 3027 aa9.96□□□□□ -0.82
UBXN2A-201ENST00000309033 KRTAP21-3Q3LHN1 58 aa9.94□□□□□ -0.82
UBXN2A-201ENST00000309033 TENM4Q6N022 2769 aa9.94□□□□□ -0.82
UBXN2A-201ENST00000309033 XP32Q5T750 250 aa9.93□□□□□ -0.82
UBXN2A-201ENST00000309033 NIPBLQ6KC79 2804 aaeCLIP9.93□□□□□ -0.82
UBXN2A-201ENST00000309033 DCHS2Q6V1P9 2916 aa9.93□□□□□ -0.82
UBXN2A-201ENST00000309033 MYO15AQ9UKN7 3530 aa9.92□□□□□ -0.82
UBXN2A-201ENST00000309033 NDUFAF8A1L188 74 aa9.91□□□□□ -0.82
UBXN2A-201ENST00000309033 ZANQ9Y493 2812 aa9.91□□□□□ -0.82
UBXN2A-201ENST00000309033 TNP1P09430 55 aa9.9□□□□□ -0.82
UBXN2A-201ENST00000309033 KRTAP16-1A8MUX0 517 aa9.9□□□□□ -0.82
UBXN2A-201ENST00000309033 HRNRQ86YZ3 2850 aaPredicted RBP9.89□□□□□ -0.83
UBXN2A-201ENST00000309033 A0A1B0GVY2 172 aa9.86□□□□□ -0.83
UBXN2A-201ENST00000309033 LOC400499M0QZD8 3231 aa9.86□□□□□ -0.83
UBXN2A-201ENST00000309033 C10orf95Q9H7T3 257 aa9.82□□□□□ -0.84
UBXN2A-201ENST00000309033 FBN2P35556 2912 aa9.74□□□□□ -0.85
UBXN2A-201ENST00000309033 H0YAA0 97 aa9.74□□□□□ -0.85
UBXN2A-201ENST00000309033 KRTAP10-8P60410 259 aa9.71□□□□□ -0.85
UBXN2A-201ENST00000309033 TPRXLQ17RH7 258 aa9.62□□□□□ -0.87
UBXN2A-201ENST00000309033 NF1P21359 2839 aa9.62□□□□□ -0.87
UBXN2A-201ENST00000309033 WDFY3Q8IZQ1 3526 aa9.61□□□□□ -0.87
UBXN2A-201ENST00000309033 RELNP78509 3460 aa9.58□□□□□ -0.88
UBXN2A-201ENST00000309033 ASPMQ8IZT6 3477 aa9.57□□□□□ -0.88
UBXN2A-201ENST00000309033 KRTAP13-3Q3SY46 172 aa9.56□□□□□ -0.88
UBXN2A-201ENST00000309033 P0C880 135 aa9.54□□□□□ -0.88
UBXN2A-201ENST00000309033 PP632Q6XCG6 107 aa9.53□□□□□ -0.88
UBXN2A-201ENST00000309033 CELSR1Q9NYQ6 3014 aa9.53□□□□□ -0.88
UBXN2A-201ENST00000309033 KRTAP10-10P60014 251 aa9.51□□□□□ -0.89
UBXN2A-201ENST00000309033 TENM1Q9UKZ4 2725 aa9.49□□□□□ -0.89
UBXN2A-201ENST00000309033 TENM2Q9NT68 2774 aa9.49□□□□□ -0.89
UBXN2A-201ENST00000309033 ZFHX4Q86UP3 3567 aa9.47□□□□□ -0.89
UBXN2A-201ENST00000309033 TENM3Q9P273 2699 aa9.36□□□□□ -0.91
UBXN2A-201ENST00000309033 TGP01266 2768 aa9.35□□□□□ -0.91
UBXN2A-201ENST00000309033 DCHS1Q96JQ0 3298 aa9.35□□□□□ -0.91
UBXN2A-201ENST00000309033 LAMA5O15230 3695 aa9.34□□□□□ -0.91
UBXN2A-201ENST00000309033 MXRA5Q9NR99 2828 aa9.33□□□□□ -0.92
UBXN2A-201ENST00000309033 CSMD1Q96PZ7 3565 aa9.29□□□□□ -0.92
UBXN2A-201ENST00000309033 NBPF19A0A087WUL8 3843 aa9.28□□□□□ -0.92
UBXN2A-201ENST00000309033 PRO2289Q9P1D8 64 aa9.23□□□□□ -0.93
UBXN2A-201ENST00000309033 KRTAP12-2P59991 146 aa9.21□□□□□ -0.93
UBXN2A-201ENST00000309033 PKD1L1Q8TDX9 2849 aa9.2□□□□□ -0.94
UBXN2A-201ENST00000309033 DMDP11532 3685 aa9.15□□□□□ -0.95
UBXN2A-201ENST00000309033 VWFP04275 2813 aa9.13□□□□□ -0.95
UBXN2A-201ENST00000309033 SMG1Q96Q15 3661 aaKnown RBP9.12□□□□□ -0.95
UBXN2A-201ENST00000309033 PDZD2O15018 2839 aa9.1□□□□□ -0.95
UBXN2A-201ENST00000309033 KRTAP3-1Q9BYR8 98 aa9.03□□□□□ -0.96
UBXN2A-201ENST00000309033 KRTAP12-1P59990 96 aa8.98□□□□□ -0.97
UBXN2A-201ENST00000309033 SVEP1Q4LDE5 3571 aa8.95□□□□□ -0.98
UBXN2A-201ENST00000309033 ANK3Q12955 4377 aaKnown RBP8.95□□□□□ -0.98
UBXN2A-201ENST00000309033 KRTAP13-4Q3LI77 160 aa8.92□□□□□ -0.98
UBXN2A-201ENST00000309033 FBN1P35555 2871 aaKnown RBP8.91□□□□□ -0.98
UBXN2A-201ENST00000309033 ZFHX3Q15911 3703 aa8.89□□□□□ -0.99
UBXN2A-201ENST00000309033 OTOGQ6ZRI0 2925 aa8.85□□□□□ -0.99
UBXN2A-201ENST00000309033 CSMD2Q7Z408 3487 aa8.79□□□□□ -1
UBXN2A-201ENST00000309033 MUC3AQ02505 3323 aa8.78□□□□□ -1
UBXN2A-201ENST00000309033 CUBNO60494 3623 aa8.74□□□□□ -1.01
UBXN2A-201ENST00000309033 KRTAP10-6P60371 365 aaPredicted RBP8.72□□□□□ -1.01
UBXN2A-201ENST00000309033 SPENQ96T58 3664 aaKnown RBP8.72□□□□□ -1.01
UBXN2A-201ENST00000309033 FBN3Q75N90 2809 aa8.66□□□□□ -1.02
UBXN2A-201ENST00000309033 TRRAPQ9Y4A5 3859 aa8.64□□□□□ -1.03
UBXN2A-201ENST00000309033 KRTAP15-1Q3LI76 137 aa8.6□□□□□ -1.03
UBXN2A-201ENST00000309033 MT1HL1P0DM35 61 aa8.57□□□□□ -1.04
UBXN2A-201ENST00000309033 SRRM2Q9UQ35 2752 aaKnown RBP8.56□□□□□ -1.04
UBXN2A-201ENST00000309033 MEGF8Q7Z7M0 2845 aa8.55□□□□□ -1.04
UBXN2A-201ENST00000309033 HUWE1Q7Z6Z7 4374 aaKnown RBP8.5□□□□□ -1.05
UBXN2A-201ENST00000309033 BSNQ9UPA5 3926 aa8.5□□□□□ -1.05
UBXN2A-201ENST00000309033 KRTAP3-3Q9BYR6 98 aa8.44□□□□□ -1.06
UBXN2A-201ENST00000309033 KRTAP3-2Q9BYR7 98 aa8.42□□□□□ -1.06
UBXN2A-201ENST00000309033 KRTAP4-5Q9BYR2 181 aa8.41□□□□□ -1.06
UBXN2A-201ENST00000309033 COL7A1Q02388 2944 aa8.39□□□□□ -1.07
UBXN2A-201ENST00000309033 VPS13CQ709C8 3753 aa8.35□□□□□ -1.07
UBXN2A-201ENST00000309033 KRTAP10-4P60372 401 aaPredicted RBP8.34□□□□□ -1.07
UBXN2A-201ENST00000309033 KRTAP10-12P60413 245 aa8.23□□□□□ -1.09
UBXN2A-201ENST00000309033 CRCT1Q9UGL9 99 aa8.21□□□□□ -1.09
UBXN2A-201ENST00000309033 ALMS1Q8TCU4 4167 aa8.17□□□□□ -1.1
UBXN2A-201ENST00000309033 CSMD3Q7Z407 3707 aa8.1□□□□□ -1.11
UBXN2A-201ENST00000309033 LORP23490 312 aaPredicted RBP8.06□□□□□ -1.12
UBXN2A-201ENST00000309033 LCE3AQ5TA76 89 aa8□□□□□ -1.13
UBXN2A-201ENST00000309033 KRTAP12-3P60328 96 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms