RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 FAT3Q8TDW7 4589 aa9.94□□□□□ -0.82
KRT28-201ENST00000306658 TNXBP22105 4242 aa9.94□□□□□ -0.82
KRT28-201ENST00000306658 ANAPC13Q9BS18 74 aa9.93□□□□□ -0.82
KRT28-201ENST00000306658 CASC2Q6XLA1 102 aa9.91□□□□□ -0.82
KRT28-201ENST00000306658 WFDC13Q8IUB5 93 aa9.91□□□□□ -0.82
KRT28-201ENST00000306658 C8orf17Q9NRJ1 99 aa9.91□□□□□ -0.82
KRT28-201ENST00000306658 MMP24-AS1A0A0U1RRL7 71 aa9.9□□□□□ -0.82
KRT28-201ENST00000306658 MT1HL1P0DM35 61 aa9.9□□□□□ -0.82
KRT28-201ENST00000306658 PCP4P48539 62 aa9.9□□□□□ -0.82
KRT28-201ENST00000306658 MYCBP2O75592 4640 aa9.88□□□□□ -0.83
KRT28-201ENST00000306658 hDV103S1A0JD37 113 aa9.88□□□□□ -0.83
KRT28-201ENST00000306658 C8orf87E5RJ46 101 aa9.88□□□□□ -0.83
KRT28-201ENST00000306658 SMIM20Q8N5G0 67 aa9.88□□□□□ -0.83
KRT28-201ENST00000306658 DMBT1Q9UGM3 2413 aaPredicted RBP9.87□□□□□ -0.83
KRT28-201ENST00000306658 KRTAP29-1A8MX34 341 aaPredicted RBP9.87□□□□□ -0.83
KRT28-201ENST00000306658 HERC2O95714 4834 aa9.85□□□□□ -0.83
KRT28-201ENST00000306658 LINC00313P59037 77 aa9.85□□□□□ -0.83
KRT28-201ENST00000306658 NOTCH2NLQ7Z3S9 236 aa9.83□□□□□ -0.84
KRT28-201ENST00000306658 SERP2Q8N6R1 65 aa9.83□□□□□ -0.84
KRT28-201ENST00000306658 TRAV7A0A075B6U4 112 aa9.82□□□□□ -0.84
KRT28-201ENST00000306658 RETNLBQ9BQ08 111 aa9.82□□□□□ -0.84
KRT28-201ENST00000306658 TMEM254Q8TBM7 123 aa9.81□□□□□ -0.84
KRT28-201ENST00000306658 MRPL34Q9BQ48 92 aaKnown RBP9.8□□□□□ -0.84
KRT28-201ENST00000306658 OCR1Q9BZK8 76 aa9.8□□□□□ -0.84
KRT28-201ENST00000306658 ABCA13Q86UQ4 5058 aa9.78□□□□□ -0.84
KRT28-201ENST00000306658 COX7CP15954 63 aa9.77□□□□□ -0.84
KRT28-201ENST00000306658 FP248Q71RG6 208 aaPredicted RBP9.75□□□□□ -0.85
KRT28-201ENST00000306658 UQCRQO14949 82 aa9.74□□□□□ -0.85
KRT28-201ENST00000306658 NDUFS5O43920 106 aa9.74□□□□□ -0.85
KRT28-201ENST00000306658 TP53AIP1Q9HCN2 124 aa9.73□□□□□ -0.85
KRT28-201ENST00000306658 J3QL48 77 aa9.71□□□□□ -0.85
KRT28-201ENST00000306658 KRTAP16-1A8MUX0 517 aa9.71□□□□□ -0.86
KRT28-201ENST00000306658 C5orf47Q569G3 176 aa9.68□□□□□ -0.86
KRT28-201ENST00000306658 Q8N9P0 234 aaPredicted RBP9.68□□□□□ -0.86
KRT28-201ENST00000306658 CCDC179H3BU77 68 aa9.67□□□□□ -0.86
KRT28-201ENST00000306658 C9orf92A6NGG3 77 aa9.67□□□□□ -0.86
KRT28-201ENST00000306658 IGLV7-46A0A075B6I9 117 aa9.66□□□□□ -0.86
KRT28-201ENST00000306658 C20orf197Q8N268 126 aa9.64□□□□□ -0.87
KRT28-201ENST00000306658 MP68P56378 58 aa9.62□□□□□ -0.87
KRT28-201ENST00000306658 TRAV22A0A0B4J277 110 aa9.61□□□□□ -0.87
KRT28-201ENST00000306658 PRR4Q16378 134 aa9.61□□□□□ -0.87
KRT28-201ENST00000306658 H0Y9P7 68 aa9.6□□□□□ -0.87
KRT28-201ENST00000306658 KLKP1Q107X0 134 aa9.57□□□□□ -0.88
KRT28-201ENST00000306658 C20orf166-AS1Q96NR2 134 aa9.57□□□□□ -0.88
KRT28-201ENST00000306658 A0A0U1RQV1 116 aa9.56□□□□□ -0.88
KRT28-201ENST00000306658 H3BPC8 53 aa9.56□□□□□ -0.88
KRT28-201ENST00000306658 KRTAP13-3Q3SY46 172 aa9.55□□□□□ -0.88
KRT28-201ENST00000306658 SNURFQ9Y675 71 aa9.55□□□□□ -0.88
KRT28-201ENST00000306658 A8MUU9 505 aa9.55□□□□□ -0.88
KRT28-201ENST00000306658 Q5W150 140 aa9.54□□□□□ -0.88
KRT28-201ENST00000306658 LINC00208Q96KT6 92 aa9.54□□□□□ -0.88
KRT28-201ENST00000306658 Q75L30 129 aa9.51□□□□□ -0.89
KRT28-201ENST00000306658 C1orf64Q8NEQ6 169 aa9.51□□□□□ -0.89
KRT28-201ENST00000306658 TPRXLQ17RH7 258 aa9.5□□□□□ -0.89
KRT28-201ENST00000306658 PCLOQ9Y6V0 5065 aa9.5□□□□□ -0.89
KRT28-201ENST00000306658 NDUFC1O43677 76 aa9.48□□□□□ -0.89
KRT28-201ENST00000306658 ZCCHC13Q8WW36 166 aaKnown RBP9.48□□□□□ -0.89
KRT28-201ENST00000306658 CYSTM1Q9H1C7 97 aa9.48□□□□□ -0.89
KRT28-201ENST00000306658 XP32Q5T750 250 aa9.46□□□□□ -0.89
KRT28-201ENST00000306658 LOC101927531A0A1B0GV80 90 aa9.45□□□□□ -0.9
KRT28-201ENST00000306658 H7BZZ5 65 aa9.42□□□□□ -0.9
KRT28-201ENST00000306658 RPL37P61927 97 aaKnown RBP9.42□□□□□ -0.9
KRT28-201ENST00000306658 ATP11AUNQ6ZP68 121 aa9.4□□□□□ -0.9
KRT28-201ENST00000306658 IGKV2-30P06310 120 aa9.38□□□□□ -0.91
KRT28-201ENST00000306658 CYP4F30PQ9H0H9 118 aa9.38□□□□□ -0.91
KRT28-201ENST00000306658 TMEM258P61165 79 aa9.36□□□□□ -0.91
KRT28-201ENST00000306658 IGKV2D-30A0A075B6S6 120 aa9.34□□□□□ -0.91
KRT28-201ENST00000306658 PCOTHQ58A44 107 aa9.32□□□□□ -0.92
KRT28-201ENST00000306658 C7orf65Q6ZTY9 151 aa9.32□□□□□ -0.92
KRT28-201ENST00000306658 FAM236DA0A1B0GTK5 79 aa9.26□□□□□ -0.93
KRT28-201ENST00000306658 FAM236CP0DP71 79 aa9.26□□□□□ -0.93
KRT28-201ENST00000306658 SPANXA2-OT1Q8N9U9 137 aa9.26□□□□□ -0.93
KRT28-201ENST00000306658 LPAP08519 4548 aa9.25□□□□□ -0.93
KRT28-201ENST00000306658 ATP5EP56381 51 aaPredicted RBP9.25□□□□□ -0.93
KRT28-201ENST00000306658 SPINK7P58062 85 aa9.25□□□□□ -0.93
KRT28-201ENST00000306658 HERC1Q15751 4861 aa9.23□□□□□ -0.93
KRT28-201ENST00000306658 HRES1P13985 223 aa9.22□□□□□ -0.93
KRT28-201ENST00000306658 LRP2P98164 4655 aa9.22□□□□□ -0.93
KRT28-201ENST00000306658 SEC61BP60468 96 aaKnown RBP9.2□□□□□ -0.94
KRT28-201ENST00000306658 HMCN2Q8NDA2 5059 aa9.12□□□□□ -0.95
KRT28-201ENST00000306658 C4orf26Q17RF5 130 aa9.1□□□□□ -0.95
KRT28-201ENST00000306658 DMAC1Q96GE9 116 aa9.07□□□□□ -0.96
KRT28-201ENST00000306658 SERP1Q9Y6X1 66 aa9.07□□□□□ -0.96
KRT28-201ENST00000306658 ACYP2P14621 99 aa9.04□□□□□ -0.96
KRT28-201ENST00000306658 RPS28P62857 69 aaKnown RBP9.03□□□□□ -0.96
KRT28-201ENST00000306658 A8MUN3 132 aa9.02□□□□□ -0.97
KRT28-201ENST00000306658 COX6B2Q6YFQ2 88 aa9□□□□□ -0.97
KRT28-201ENST00000306658 MUC17Q685J3 4493 aa8.97□□□□□ -0.97
KRT28-201ENST00000306658 COA5Q86WW8 74 aa8.97□□□□□ -0.97
KRT28-201ENST00000306658 KRTAP3-1Q9BYR8 98 aa8.94□□□□□ -0.98
KRT28-201ENST00000306658 RBM12B-AS1Q9P1G2 102 aa8.94□□□□□ -0.98
KRT28-201ENST00000306658 MPLKIPQ8TAP9 179 aa8.92□□□□□ -0.98
KRT28-201ENST00000306658 KRTAP4-1Q9BYQ7 146 aa8.91□□□□□ -0.98
KRT28-201ENST00000306658 CHKB-CPT1BH3BT56 60 aa8.9□□□□□ -0.98
KRT28-201ENST00000306658 SMIM26A0A096LP01 95 aa8.83□□□□□ -1
KRT28-201ENST00000306658 H1FX-AS1Q4G0G2 97 aa8.81□□□□□ -1
KRT28-201ENST00000306658 SPTSSBQ8NFR3 76 aa8.75□□□□□ -1.01
KRT28-201ENST00000306658 S4R3F8 94 aa8.73□□□□□ -1.01
KRT28-201ENST00000306658 UBR4Q5T4S7 5183 aa8.73□□□□□ -1.01
KRT28-201ENST00000306658 MUC2Q02817 5179 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms