RNA–Protein interactions for RNA: ENST00000304992.10

PRPF8-201, Transcript of pre-mRNA processing factor 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF8, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-201ENST00000304992 NBEAQ8NFP9 2946 aa5.81□□□□□ -1.48
PRPF8-201ENST00000304992 ZZEF1O43149 2961 aa5.81□□□□□ -1.48
PRPF8-201ENST00000304992 CELSR2Q9HCU4 2923 aa5.8□□□□□ -1.48
PRPF8-201ENST00000304992 USP34Q70CQ2 3546 aa5.78□□□□□ -1.48
PRPF8-201ENST00000304992 Q5XG85 94 aa5.77□□□□□ -1.49
PRPF8-201ENST00000304992 ROMO1P60602 79 aa5.77□□□□□ -1.49
PRPF8-201ENST00000304992 KRTAP13-2Q52LG2 175 aa5.76□□□□□ -1.49
PRPF8-201ENST00000304992 KRTAP7-1Q8IUC3 87 aa5.76□□□□□ -1.49
PRPF8-201ENST00000304992 KRTAP29-1A8MX34 341 aaPredicted RBP5.75□□□□□ -1.49
PRPF8-201ENST00000304992 SPTBN5Q9NRC6 3674 aaKnown RBP5.74□□□□□ -1.49
PRPF8-201ENST00000304992 C20orf166-AS1Q96NR2 134 aa5.73□□□□□ -1.49
PRPF8-201ENST00000304992 A8MUU9 505 aa5.71□□□□□ -1.49
PRPF8-201ENST00000304992 DCHS2Q6V1P9 2916 aa5.71□□□□□ -1.5
PRPF8-201ENST00000304992 DMXL1Q9Y485 3027 aa5.71□□□□□ -1.5
PRPF8-201ENST00000304992 KRTAP21-3Q3LHN1 58 aa5.71□□□□□ -1.5
PRPF8-201ENST00000304992 TNRC18O15417 2968 aaPredicted RBP5.69□□□□□ -1.5
PRPF8-201ENST00000304992 RPS29P62273 56 aaKnown RBP5.69□□□□□ -1.5
PRPF8-201ENST00000304992 ASB16-AS1Q495Z4 193 aa5.68□□□□□ -1.5
PRPF8-201ENST00000304992 A8MU10 97 aa5.65□□□□□ -1.5
PRPF8-201ENST00000304992 NIPBLQ6KC79 2804 aaeCLIP5.65□□□□□ -1.5
PRPF8-201ENST00000304992 KRTAP13-1Q8IUC0 172 aa5.65□□□□□ -1.51
PRPF8-201ENST00000304992 ZANQ9Y493 2812 aa5.64□□□□□ -1.51
PRPF8-201ENST00000304992 A0A0A0MQY5 61 aa5.62□□□□□ -1.51
PRPF8-201ENST00000304992 TENM1Q9UKZ4 2725 aa5.59□□□□□ -1.51
PRPF8-201ENST00000304992 LOC400499M0QZD8 3231 aa5.59□□□□□ -1.51
PRPF8-201ENST00000304992 NF1P21359 2839 aa5.58□□□□□ -1.52
PRPF8-201ENST00000304992 MYO15AQ9UKN7 3530 aa5.57□□□□□ -1.52
PRPF8-201ENST00000304992 A0A1B0GVY2 172 aa5.56□□□□□ -1.52
PRPF8-201ENST00000304992 FBN2P35556 2912 aa5.54□□□□□ -1.52
PRPF8-201ENST00000304992 TENM3Q9P273 2699 aa5.52□□□□□ -1.52
PRPF8-201ENST00000304992 TENM2Q9NT68 2774 aa5.49□□□□□ -1.53
PRPF8-201ENST00000304992 H3BS24 57 aa5.49□□□□□ -1.53
PRPF8-201ENST00000304992 XP32Q5T750 250 aa5.48□□□□□ -1.53
PRPF8-201ENST00000304992 PKD1L1Q8TDX9 2849 aa5.48□□□□□ -1.53
PRPF8-201ENST00000304992 HRNRQ86YZ3 2850 aaPredicted RBP5.47□□□□□ -1.53
PRPF8-201ENST00000304992 CELSR1Q9NYQ6 3014 aa5.47□□□□□ -1.53
PRPF8-201ENST00000304992 TNP1P09430 55 aa5.46□□□□□ -1.54
PRPF8-201ENST00000304992 KRTAP1-4P0C5Y4 121 aa5.46□□□□□ -1.54
PRPF8-201ENST00000304992 KRTAP10-8P60410 259 aa5.46□□□□□ -1.54
PRPF8-201ENST00000304992 DCHS1Q96JQ0 3298 aa5.43□□□□□ -1.54
PRPF8-201ENST00000304992 RELNP78509 3460 aa5.42□□□□□ -1.54
PRPF8-201ENST00000304992 WDFY3Q8IZQ1 3526 aa5.42□□□□□ -1.54
PRPF8-201ENST00000304992 KRTAP25-1Q3LHN0 102 aa5.4□□□□□ -1.54
PRPF8-201ENST00000304992 KRTAP10-10P60014 251 aa5.39□□□□□ -1.55
PRPF8-201ENST00000304992 VWFP04275 2813 aa5.39□□□□□ -1.55
PRPF8-201ENST00000304992 ASPMQ8IZT6 3477 aa5.39□□□□□ -1.55
PRPF8-201ENST00000304992 C10orf95Q9H7T3 257 aa5.37□□□□□ -1.55
PRPF8-201ENST00000304992 NBPF19A0A087WUL8 3843 aa5.36□□□□□ -1.55
PRPF8-201ENST00000304992 TPRXLQ17RH7 258 aa5.35□□□□□ -1.55
PRPF8-201ENST00000304992 MXRA5Q9NR99 2828 aa5.33□□□□□ -1.56
PRPF8-201ENST00000304992 A6NN06 94 aa5.33□□□□□ -1.56
PRPF8-201ENST00000304992 LAMA5O15230 3695 aa5.29□□□□□ -1.56
PRPF8-201ENST00000304992 NDUFAF8A1L188 74 aa5.27□□□□□ -1.57
PRPF8-201ENST00000304992 KRTAP13-3Q3SY46 172 aa5.27□□□□□ -1.57
PRPF8-201ENST00000304992 ZFHX3Q15911 3703 aa5.24□□□□□ -1.57
PRPF8-201ENST00000304992 TGP01266 2768 aa5.24□□□□□ -1.57
PRPF8-201ENST00000304992 PDZD2O15018 2839 aa5.23□□□□□ -1.57
PRPF8-201ENST00000304992 ZFHX4Q86UP3 3567 aa5.23□□□□□ -1.57
PRPF8-201ENST00000304992 KRTAP16-1A8MUX0 517 aa5.22□□□□□ -1.57
PRPF8-201ENST00000304992 PRO2289Q9P1D8 64 aa5.2□□□□□ -1.58
PRPF8-201ENST00000304992 P0C880 135 aa5.18□□□□□ -1.58
PRPF8-201ENST00000304992 H0YAA0 97 aa5.18□□□□□ -1.58
PRPF8-201ENST00000304992 FBN1P35555 2871 aaKnown RBP5.16□□□□□ -1.58
PRPF8-201ENST00000304992 SRRM2Q9UQ35 2752 aaKnown RBP5.16□□□□□ -1.58
PRPF8-201ENST00000304992 PP632Q6XCG6 107 aa5.15□□□□□ -1.59
PRPF8-201ENST00000304992 CSMD1Q96PZ7 3565 aa5.13□□□□□ -1.59
PRPF8-201ENST00000304992 DMDP11532 3685 aa5.1□□□□□ -1.59
PRPF8-201ENST00000304992 MUC3AQ02505 3323 aa5.04□□□□□ -1.6
PRPF8-201ENST00000304992 CSMD2Q7Z408 3487 aa5.02□□□□□ -1.61
PRPF8-201ENST00000304992 OTOGQ6ZRI0 2925 aa5.01□□□□□ -1.61
PRPF8-201ENST00000304992 CUBNO60494 3623 aa5□□□□□ -1.61
PRPF8-201ENST00000304992 SMG1Q96Q15 3661 aaKnown RBP5□□□□□ -1.61
PRPF8-201ENST00000304992 SVEP1Q4LDE5 3571 aa4.96□□□□□ -1.61
PRPF8-201ENST00000304992 KRTAP12-2P59991 146 aa4.94□□□□□ -1.62
PRPF8-201ENST00000304992 FBN3Q75N90 2809 aa4.93□□□□□ -1.62
PRPF8-201ENST00000304992 COL7A1Q02388 2944 aa4.93□□□□□ -1.62
PRPF8-201ENST00000304992 SPENQ96T58 3664 aaKnown RBP4.9□□□□□ -1.63
PRPF8-201ENST00000304992 TRRAPQ9Y4A5 3859 aa4.87□□□□□ -1.63
PRPF8-201ENST00000304992 MEGF8Q7Z7M0 2845 aa4.87□□□□□ -1.63
PRPF8-201ENST00000304992 ANK3Q12955 4377 aaKnown RBP4.85□□□□□ -1.63
PRPF8-201ENST00000304992 KRTAP12-1P59990 96 aa4.81□□□□□ -1.64
PRPF8-201ENST00000304992 KRTAP3-1Q9BYR8 98 aa4.81□□□□□ -1.64
PRPF8-201ENST00000304992 KRTAP13-4Q3LI77 160 aa4.81□□□□□ -1.64
PRPF8-201ENST00000304992 KRTAP4-5Q9BYR2 181 aa4.77□□□□□ -1.65
PRPF8-201ENST00000304992 MT1HL1P0DM35 61 aa4.74□□□□□ -1.65
PRPF8-201ENST00000304992 KRTAP15-1Q3LI76 137 aa4.74□□□□□ -1.65
PRPF8-201ENST00000304992 CRCT1Q9UGL9 99 aa4.67□□□□□ -1.66
PRPF8-201ENST00000304992 BSNQ9UPA5 3926 aa4.65□□□□□ -1.67
PRPF8-201ENST00000304992 KRTAP10-6P60371 365 aaPredicted RBP4.63□□□□□ -1.67
PRPF8-201ENST00000304992 VPS13CQ709C8 3753 aa4.61□□□□□ -1.67
PRPF8-201ENST00000304992 HUWE1Q7Z6Z7 4374 aaKnown RBP4.6□□□□□ -1.67
PRPF8-201ENST00000304992 CSMD3Q7Z407 3707 aa4.56□□□□□ -1.68
PRPF8-201ENST00000304992 KRTAP10-12P60413 245 aa4.54□□□□□ -1.68
PRPF8-201ENST00000304992 KRTAP10-4P60372 401 aaPredicted RBP4.54□□□□□ -1.68
PRPF8-201ENST00000304992 KRTAP3-3Q9BYR6 98 aa4.49□□□□□ -1.69
PRPF8-201ENST00000304992 KRTAP3-2Q9BYR7 98 aa4.46□□□□□ -1.7
PRPF8-201ENST00000304992 ALMS1Q8TCU4 4167 aa4.43□□□□□ -1.7
PRPF8-201ENST00000304992 ZNF469Q96JG9 3925 aaPredicted RBP4.39□□□□□ -1.71
PRPF8-201ENST00000304992 KRTAP12-3P60328 96 aa4.37□□□□□ -1.71
PRPF8-201ENST00000304992 LORP23490 312 aaPredicted RBP4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 203 ms